mRNA_F-serratus_M_contig75.18780.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig75.18780.1 vs. uniprot
Match: A0A6H5KGN2_9PHAE (P4Hc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN2_9PHAE) HSP 1 Score: 279 bits (713), Expect = 1.160e-86 Identity = 140/210 (66.67%), Postives = 156/210 (74.29%), Query Frame = 1
Query: 316 SIDGLLSARECATWISHAEEKGFERSFHAQTAEIAHRDNGRITLHSPAVAAAVFARVGPFVPAEMDGRSAAGCNANIRMYRYNVGQRFGKHVDESVEDENGCVSYWTVLIYLNGGEGG--------------SDATDGRDTGSGADEALEPLRGGETVFYKGNYGGKIAASFAPTMGACLIHGHGQRCLLHEGAVVTAGAKYVLRTDVMY 903
SIDGLLS RECA WI + E +GFERSFH QT+E+AHRDNGRITLHS VAAAVFARVG FVPA M GR CN+NIR+YRY VGQRFGKH+DESV+DENG S WTVLIYLNG +D +GA E PLRGGETVFYKGNYG K+AASF+P GACL+HGHGQ+CLLHEGA VT+G KY+LRTDVMY
Sbjct: 22 SIDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXXXXKKKGRSDXXXAFAGAGEEGAPLRGGETVFYKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 231
BLAST of mRNA_F-serratus_M_contig75.18780.1 vs. uniprot
Match: D7FQ80_ECTSI (P4Hc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ80_ECTSI) HSP 1 Score: 279 bits (714), Expect = 3.420e-85 Identity = 171/363 (47.11%), Postives = 199/363 (54.82%), Query Frame = 1
Query: 100 MTKKGKRASEGTGKTDSSRRRPASSAATKCKADMLYTSRVVGTPILPPPRSDGKKK---IELHLTSKRVYQETILSIDGLLSARECATWISHAEEKGFERSFHAQTAEIAHRDNGRITLHSPAVAAAVFARVGPFVPAEMDGRSAAGCNANIRMYRYNVGQRFGKHVDESVEDENGCVSYWTVLIYLNGGEGG---------------SDATDGRDTGSGADEALEPLRGGETVFYK-----------------------------------------------------------------------------GNYGGKIAASFAPTMGACLIHGHGQRCLLHEGAVVTAGAKYVLRTDVMY 903
M KKGKR ++G T+ RR ++ L +RV G +LP DGK + ++L LTSKR+YQ+TILSIDGLLS RECA WI + E +GFERSFH QT+E+AHRDNGRITLHS VAAAVFARVG FVPA M GR CN+NIR+YRY VGQRFGKH+DESV+DENG S WTVLIYLNG +D T +GA E PLRGGETVFYK GNYG K+AASF+P GACL+HGHGQ+CLLHEGA VT+G KY+LRTDVMY
Sbjct: 1 MGKKGKRTTDG---TEDPRR-----------SETLRHTRVYGPLVLP----DGKGENDAVDLELTSKRIYQDTILSIDGLLSPRECAAWIRYGEGQGFERSFHRQTSEMAHRDNGRITLHSADVAAAVFARVGKFVPANMGGRRPLACNSNIRIYRYAVGQRFGKHIDESVDDENGLTSQWTVLIYLNGXXXXXXXXXXXXXXXXSKKKGRSDXXXTFAGAGEEGAPLRGGETVFYKAAADALCCVPLFPIGTRGFKQILEESVSVHSPTLPLTQVPCSLFPTCVLLPLNPSPLSAVLRALTFGSLSSCLLPFKGNYGDKVAASFSPRQGACLVHGHGQQCLLHEGAAVTSGVKYLLRTDVMY 345
BLAST of mRNA_F-serratus_M_contig75.18780.1 vs. uniprot
Match: A0A836CHZ3_9STRA (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ3_9STRA) HSP 1 Score: 248 bits (634), Expect = 1.720e-75 Identity = 124/205 (60.49%), Postives = 147/205 (71.71%), Query Frame = 1
Query: 295 VYQETILSIDGLLSARECATWISHAEEKGFERSFHAQTAEIAHRDNGRITLHSPAVAAAVFARVGPFVPAEMD-GRSAAGCNANIRMYRYNVGQRFGKHVDESVEDEN-GCVSYWTVLIYLNGGEGGSDATDGRDTGSGADEALEPLRGGETVFYKGNYGGKIAASFAPTMGACLIHGHGQRCLLHEGAVVTAGAKYVLRTDVMY 903
VYQ+ I IDG L+ EC WI EE GFE +FH T EIAHRDNGR+ +HSP +AAA++ R+ PFVPAE+ GR AAGCNANIR+YRY VGQRFGKH+DESV D G S +T+L+YLNG GS PL GGET+FYKG+YGGK+AAS P G+CL+HGHG RCLLHEGA+VT+G KY+LRTDVMY
Sbjct: 1 VYQDLIFRIDGFLTPAECGAWIDWGEETGFENTFHTATREIAHRDNGRLQVHSPDIAAAIWQRIQPFVPAELSRGRKAAGCNANIRLYRYCVGQRFGKHIDESVLDPTTGATSEYTLLLYLNG------------AGSPVRGEEGPLAGGETLFYKGSYGGKLAASVTPIAGSCLVHGHGARCLLHEGALVTSGVKYLLRTDVMY 193
BLAST of mRNA_F-serratus_M_contig75.18780.1 vs. uniprot
Match: A0A7S2UX31_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UX31_9STRA) HSP 1 Score: 226 bits (575), Expect = 3.130e-65 Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 1
Query: 253 DGKKKIELHLTSKRVYQETILSIDGLLSARECATWISHAEEKGFERSFHAQTAEIAHRDNGRITLHSPAVAAAVFARVGPFVPAEMDGRSAAGCNANIRMYRYNVGQRFGKHVDESVEDENGCVSYWTVLIYLNGGEGGSDATDGRDTGSGA------DEAL-EPLRGGETVFYKGNYGGKIAASFAPTMGACLIHGHGQRCLLHEGAVVTAGAKYVLRTDVMY 903
+ +K + L L ++ +Y++ I I + +EC WI E GFE FH T E AHRDNGR+ S AVA ++ R+ FVP M G+ A+GC+ NIR+Y+Y GQRFGKH+D S D++G SY+TVL+YL+GGE + + G +E+L EPL+GG TVFY+G+YG K+AAS AP G+CL+HGHG RCL+HEGA V G KYVLRTDVMY
Sbjct: 81 NNQKMVSLSLRTEGIYRDLIFGIPNFFTPQECRAWIRFGENNGFELQFHNATQEYAHRDNGRLQWESEAVAGVLWERLRAFVPTHMGGKEASGCSNNIRLYKYVPGQRFGKHIDGSNVDQHGRQSYYTVLVYLSGGEDQGRPSPAEEEAKGGAPLDGLEESLQEPLQGGHTVFYRGSYGDKVAASVAPLQGSCLLHGHGDRCLVHEGAEVKRGVKYVLRTDVMY 304
BLAST of mRNA_F-serratus_M_contig75.18780.1 vs. uniprot
Match: A0A0L0G5Z2_9EUKA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5Z2_9EUKA) HSP 1 Score: 214 bits (546), Expect = 1.100e-61 Identity = 110/227 (48.46%), Postives = 147/227 (64.76%), Query Frame = 1
Query: 229 PILPPPRSDGKKKIELHLTSKRVYQETILSIDGLLSARECATWISHAEEKGFERSFHAQTAEIAHRDNGRITLHSPAVAAAVFARVGPFVPAEMDGRSAAGCNANIRMYRYNVGQRFGKHVDESVEDENGCVSYWTVLIYLNGGEGGSDATDGRDTGSGAD-EALEPLRGGETVFYKGNYGGKIAASFAPTMGACLIHGHGQRCLLHEGAVVTAGAKYVLRTDVMYS 906
P++P PR K ++L++ + +Y++TI ++ LS ECA WI E +GFE SF Q E AHRDNGRI++ S ++A A F R+ P +P + R CN NIR+Y+Y GQRFG+HVDESV D NG S +TVL+YLNG + + R +G GAD EA+ L GGET FY+ ++G IA + P G L+HGHG +CL HEGA V G KY+LRTDVMY+
Sbjct: 31 PLIPEPRGYSKP-VQLNMDKEYLYKDTIYTLTNFLSDSECAAWIEFGEREGFEASFQKQNRECAHRDNGRISIESESIAQAFFLRLNPSLPEKYGTRQLNSCNTNIRLYKYGPGQRFGRHVDESVVDSNGRKSVYTVLVYLNGHNEDNTSETPR-SGDGADLEAINTLVGGETKFYRRHHGSAIACAVRPKKGQALLHGHGAQCLTHEGAEVKEGVKYLLRTDVMYA 255
BLAST of mRNA_F-serratus_M_contig75.18780.1 vs. uniprot
Match: A0A7S2ZAS2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZAS2_9RHOD) HSP 1 Score: 210 bits (535), Expect = 5.000e-60 Identity = 106/224 (47.32%), Postives = 138/224 (61.61%), Query Frame = 1
Query: 232 ILPPPRSDGKKKIELHLTSKRVYQETILSIDGLLSARECATWISHAEEKGFERSFHAQTAEIAHRDNGRITLHSPAVAAAVFARVGPFVPAEMDGRSAAGCNANIRMYRYNVGQRFGKHVDESVEDENGCVSYWTVLIYLNGGEGGSDATDGRDTGSGADEALEPLRGGETVFYKGNYGGKIAASFAPTMGACLIHGHGQRCLLHEGAVVTAGAKYVLRTDVMY 903
+ PP G+K + + + ++ YQ+ I ++ + REC WI + E G +FH +A++AHRDNGRI HS +AA +F RV +P + AGC++NIR+YRY GQRFGKHVDES + ENG S +T+LIYLN E LRGGETVFYKGNYG K+A S+AP G+ L+HGHG RC++HEG V G KYVLRTDVMY
Sbjct: 52 VYPPKGYYGEKMVNVRMKRRQGYQDLIHVVEDFFTERECTAWIEYGERYGSTEAFHLASADLAHRDNGRIQFHSDEIAAEIFNRVKVMLPETFEKLVPAGCSSNIRLYRYIEGQRFGKHVDESHDGENGERSVFTLLIYLN---------------------HEGLRGGETVFYKGNYGDKLALSYAPRAGSLLLHGHGSRCMVHEGKAVIEGQKYVLRTDVMY 254
BLAST of mRNA_F-serratus_M_contig75.18780.1 vs. uniprot
Match: A0A7S2Z9G1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2Z9G1_9RHOD) HSP 1 Score: 181 bits (458), Expect = 3.570e-50 Identity = 93/175 (53.14%), Postives = 113/175 (64.57%), Query Frame = 1
Query: 379 GFERSFHAQTAEIAHRDNGRITLHSPAVAAAVFARVGPFVPAEMDGRSAAGCNANIRMYRYNVGQRFGKHVDESVEDENGCVSYWTVLIYLNGGEGGSDATDGRDTGSGADEALEPLRGGETVFYKGNYGGKIAASFAPTMGACLIHGHGQRCLLHEGAVVTAGAKYVLRTDVMY 903
G +FH +A++AHRDNGRI HS +AA +F RV +P + AGC++NIR+YRY GQRFGKHVDES + ENG S +T+LIYLN E LRGGETVFYKGNYG K+A S+AP G+ L+HGHG RC++HEG V G KYVLRTDVMY
Sbjct: 5 GSTEAFHLASADLAHRDNGRIQFHSDEIAAEIFNRVKVMLPETFEKLVPAGCSSNIRLYRYIEGQRFGKHVDESHDGENGERSVFTLLIYLN---------------------HEGLRGGETVFYKGNYGDKLALSYAPRAGSLLLHGHGSRCMVHEGKAVIEGQKYVLRTDVMY 158
BLAST of mRNA_F-serratus_M_contig75.18780.1 vs. uniprot
Match: A0A2R5GIH8_9STRA (Tetraacyldisaccharide 4'-kinase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GIH8_9STRA) HSP 1 Score: 184 bits (467), Expect = 3.020e-47 Identity = 102/218 (46.79%), Postives = 131/218 (60.09%), Query Frame = 1
Query: 268 IELHLTSKRVYQETILSIDGLLSARECATWISHAEEKGFERSFHAQTAEIAHRDNGRITLHSPAVAAAVFARVGPFVPAEMDGRSAAGCNANIRMYRYNVGQRFGKHVDES-VEDENGCVSYWTVLIYLNGGEGGSDATDGRDTGSGADEALEPLRGGETVFYKGNYGGKIAASFAPTMGACLIHGHGQRCLLHEGAVVTAGAKYVLRTDVMYS*SQL 918
++L L V ++ I ++ LS ECA WI+ E++GF + A +A A RDNGRI++H P VAA +F R+ VPAE+DGR A GC+ NIR+YRY GQRFGKH+DES E + S +T+L YLN DE L+ GGETVFY GN G K A P G L+H HG RCL+HEGA V AG KY+LR+DV+ +QL
Sbjct: 105 VKLDLERFAVLRDLIFAVPRCLSPEECAAWIAWGEKRGFASAKQASSAGFAFRDNGRISVHDPEVAAIIFQRLRGVVPAEIDGRKAVGCSPNIRLYRYATGQRFGKHIDESNFEQDLDAWSEFTLLFYLN------------------DEGLD---GGETVFYSGNTGTKEALRVPPAQGLALLHWHGDRCLVHEGANVRAGVKYLLRSDVLLLYTQL 301
BLAST of mRNA_F-serratus_M_contig75.18780.1 vs. uniprot
Match: R1DNF6_EMIHU (P4Hc domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DNF6_EMIHU) HSP 1 Score: 174 bits (440), Expect = 7.870e-47 Identity = 92/202 (45.54%), Postives = 123/202 (60.89%), Query Frame = 1
Query: 307 TILSIDGLLSARECATWISHAEEKGFERSFHAQTAEIAHRDNGRITLHSPAVAAAVFARVGPFVPAEMDGRSAA--GCNANIRMYRYNVGQRFGKHVDESVEDENGCVSYWTVLIYLNGGEGGSDATDGRDTGSGADEALEPLRGGETVFYKGNYGGKIAASFAPTMGACLIHGHGQRCLLHEGAVVTAGAKYVLRTDVMYS 906
++LSI LS ECA W+S E GFE+ HAQT IAHRDNGR+ + S ++AAA+++R+ P +PAE R A GCN NIR+YRY GQRFG+HVD+S G + WT+L+YL+GG G + + GGET FY G G+ + P G+ L+H HG+RCL HE V G KYVLR+DV+++
Sbjct: 13 SMLSIPAFLSPAECAAWVSWGETSGFEQEKHAQTRWIAHRDNGRLAVQSESIAAALWSRLAPLMPAESTRRGAVACGCNPNIRLYRYTPGQRFGQHVDQSNALPGGEQTEWTMLVYLSGGPG------------------QEVVGGETAFYDG---GRRSVVVDPLAGSALLHAHGERCLTHEALEVRRGVKYVLRSDVVFA 193
BLAST of mRNA_F-serratus_M_contig75.18780.1 vs. uniprot
Match: A0A6T9P3C4_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A6T9P3C4_9EUKA) HSP 1 Score: 173 bits (439), Expect = 9.130e-47 Identity = 92/202 (45.54%), Postives = 120/202 (59.41%), Query Frame = 1
Query: 307 TILSIDGLLSARECATWISHAEEKGFERSFHAQTAEIAHRDNGRITLHSPAVAAAVFARV--GPFVPAEMDGRSAAGCNANIRMYRYNVGQRFGKHVDESVEDENGCVSYWTVLIYLNGGEGGSDATDGRDTGSGADEALEPLRGGETVFYKGNYGGKIAASFAPTMGACLIHGHGQRCLLHEGAVVTAGAKYVLRTDVMYS 906
T+ + +LS ECA WI E GF+ HAQTA IAHRDNGR+ + S VA A+F R+ VP+ + +GCNANIR+Y+Y GQRFG+HVD+S +G + +TVL+YLN E RGGETVFY ++ A F+P+ GA L+H HG+RCL HEG+ VT G KY+LRTD+ YS
Sbjct: 33 TMATAASILSPAECAAWIDWGEATGFQLEKHAQTAYIAHRDNGRLAVQSDVVAKAIFDRLMQAGLVPSTVGRLRPSGCNANIRLYKYGQGQRFGRHVDQSNRLSDGSSTEFTVLLYLN----------------------EGFRGGETVFYTSHFAATEAYRFSPSAGAVLVHAHGERCLTHEGSEVTQGVKYLLRTDLAYS 212 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig75.18780.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig75.18780.1 >prot_F-serratus_M_contig75.18780.1 ID=prot_F-serratus_M_contig75.18780.1|Name=mRNA_F-serratus_M_contig75.18780.1|organism=Fucus serratus male|type=polypeptide|length=270bp MTKKGKRASEGTGKTDSSRRRPASSAATKCKADMLYTSRVVGTPILPPPRback to top mRNA from alignment at F-serratus_M_contig75:914860..926627- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig75.18780.1 ID=mRNA_F-serratus_M_contig75.18780.1|Name=mRNA_F-serratus_M_contig75.18780.1|organism=Fucus serratus male|type=mRNA|length=11768bp|location=Sequence derived from alignment at F-serratus_M_contig75:914860..926627- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig75:914860..926627- >mRNA_F-serratus_M_contig75.18780.1 ID=mRNA_F-serratus_M_contig75.18780.1|Name=mRNA_F-serratus_M_contig75.18780.1|organism=Fucus serratus male|type=CDS|length=1620bp|location=Sequence derived from alignment at F-serratus_M_contig75:914860..926627- (Fucus serratus male)back to top |