prot_F-serratus_M_contig1247.1874.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1247.1874.1
Unique Nameprot_F-serratus_M_contig1247.1874.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length180
Homology
BLAST of mRNA_F-serratus_M_contig1247.1874.1 vs. uniprot
Match: D7FHG3_ECTSI (40S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHG3_ECTSI)

HSP 1 Score: 310 bits (793), Expect = 1.550e-105
Identity = 157/179 (87.71%), Postives = 165/179 (92.18%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVHTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVTIGVKKGKKAPPKEEEEEVSKSNHVQRKLASRQKDRKLETLLDDQVSSGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKKSK 179
            MGRPAA TKLGHKRVHPVRCRGGNMKYRALRLD+GNFSWGTEV T KTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFK WYE+HYGV IG+KKGKKA P EEE  V+KS+HV+RKLA RQ DR L TLLD+QV+SGRFLACISSRPGQ GRCDGYILEGKELEFYQKMLAKKKSK
Sbjct:   29 MGRPAANTKLGHKRVHPVRCRGGNMKYRALRLDSGNFSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKHWYENHYGVVIGLKKGKKAAPVEEEA-VAKSDHVKRKLAKRQTDRTLSTLLDEQVASGRFLACISSRPGQSGRCDGYILEGKELEFYQKMLAKKKSK 206          
BLAST of mRNA_F-serratus_M_contig1247.1874.1 vs. uniprot
Match: A0A7S2USH6_9STRA (40S ribosomal protein S8 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USH6_9STRA)

HSP 1 Score: 271 bits (693), Expect = 6.110e-90
Identity = 135/179 (75.42%), Postives = 150/179 (83.80%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVHTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVTIGVKKGKKAPPKEE--EEEVSKSNHVQRKLASRQKDRKLETLLDDQVSSGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKK 177
            MGRPAA TKLG KRVHPVRC GGNMKYRA+RL+ G +SWGTE  + K RILDVVYNASNNELVRTKTLVKNA+V++DAHPFK WYE+HYGV IG KKGK+ P K+E  +E+  KS+HVQRK+A RQKDR L   LDDQ   GR LACISSRPGQ GR DGYILEGKELEFYQKMLA+KK
Sbjct:   49 MGRPAANTKLGTKRVHPVRCMGGNMKYRAMRLEAGTYSWGTEAISRKARILDVVYNASNNELVRTKTLVKNAVVLIDAHPFKAWYEAHYGVVIGKKKGKRMPKKDEADDEDAKKSSHVQRKIAKRQKDRTLMQNLDDQFVGGRLLACISSRPGQSGRADGYILEGKELEFYQKMLARKK 227          
BLAST of mRNA_F-serratus_M_contig1247.1874.1 vs. uniprot
Match: A0A836CLT8_9STRA (40S ribosomal protein S8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT8_9STRA)

HSP 1 Score: 266 bits (681), Expect = 2.160e-88
Identity = 132/183 (72.13%), Postives = 156/183 (85.25%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVHTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVTIGVKKGKKAPPKEE----EEEVSKSNHVQRKLASRQKDRKLETLLDDQVSSGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKKSK 179
            +GRPAA TK+G  R+  VRCRGGN+K+RALRL+TGN+SWGTEV T KTRILDVVYNASNNELVRTKTLVK A+V +DA PF++WYE+HYG+ IGVKKGK+A   +     +EE  KS+HVQRKLA+RQK R L+TLLD+Q +SGR LACISSRPGQ GRCDGYILEGKELEFYQK+L++KK K
Sbjct:   29 LGRPAANTKMGATRIRTVRCRGGNLKFRALRLETGNYSWGTEVCTRKTRILDVVYNASNNELVRTKTLVKGAVVSIDATPFRQWYEAHYGIAIGVKKGKRAAAGKAAATTDEEAKKSDHVQRKLAARQKTRALDTLLDEQFASGRILACISSRPGQSGRCDGYILEGKELEFYQKILSRKKGK 211          
BLAST of mRNA_F-serratus_M_contig1247.1874.1 vs. uniprot
Match: A0A7S2JRG2_9STRA (40S ribosomal protein S8 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JRG2_9STRA)

HSP 1 Score: 260 bits (665), Expect = 4.050e-86
Identity = 133/176 (75.57%), Postives = 144/176 (81.82%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVHTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVTIGVKKGKKAPPKEEEEEVSKSNHVQRKLASRQKDRKLETLLDDQVSSGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKK 176
            MGRPAAMTK+G KRV  VRCRGGNMKYRALRLDTGNFSWGTEV T K RILDV YNASNNELVRTKTLVK AIV+VD HPFK WYESHYGV  G++  K   P  +E+E  KSNHVQRKLA+RQK R LE  LD Q++SGRFLA I+SRPGQ GRCDG ILEG EL FYQKM+ KK
Sbjct:   29 MGRPAAMTKIGEKRVREVRCRGGNMKYRALRLDTGNFSWGTEVCTRKVRILDVTYNASNNELVRTKTLVKGAIVLVDCHPFKTWYESHYGVKTGLRGAK---PPVDEDEAKKSNHVQRKLAARQKTRSLEPTLDSQLASGRFLAKITSRPGQSGRCDGVILEGPELAFYQKMMHKK 201          
BLAST of mRNA_F-serratus_M_contig1247.1874.1 vs. uniprot
Match: A0A7S1Z304_TRICV (40S ribosomal protein S8 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z304_TRICV)

HSP 1 Score: 260 bits (664), Expect = 5.950e-86
Identity = 130/176 (73.86%), Postives = 148/176 (84.09%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVHTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVTIGVKKGKKAPPKEEEEEVSKSNHVQRKLASRQKDRKLETLLDDQVSSGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKK 176
            +GRPAAMTK+G KRVH VRCRGGN+K+RALRLD+GNFSWGTEV T K RILDV YNASNNELVRTKTLVK AIV++DAHPFK+WYE+HYGV IGVKKG+KA    +EE   KS  VQRKLA+RQK+R LE  LD Q +SGR LA I+SRPGQCGRCDG +LEG EL FYQ+ +AKK
Sbjct:   29 LGRPAAMTKIGEKRVHEVRCRGGNLKFRALRLDSGNFSWGTEVCTRKVRILDVTYNASNNELVRTKTLVKGAIVLIDAHPFKEWYEAHYGVKIGVKKGQKAHA--DEEAPKKSERVQRKLAARQKNRTLEQPLDHQFASGRLLAKITSRPGQCGRCDGVVLEGAELHFYQRQMAKK 202          
BLAST of mRNA_F-serratus_M_contig1247.1874.1 vs. uniprot
Match: B8CB96_THAPS (40S ribosomal protein S8 n=2 Tax=Ochrophyta TaxID=2696291 RepID=B8CB96_THAPS)

HSP 1 Score: 259 bits (661), Expect = 1.590e-85
Identity = 129/175 (73.71%), Postives = 146/175 (83.43%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVHTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVTIGVKKGKKAPPKEEEEEVSKSNHVQRKLASRQKDRKLETLLDDQVSSGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAK 175
            +GRPAAMTK+G KR+H VRCRGGN+K+RALRLD+GNFSWGTEV T K R+LDVVYNASNNELVRTKTLVK AIV+VDAHPFK WYESHYGV IG+KKG+ A    EEEEV +S+HVQRKLA+RQK R LE  +D Q++SGR  A I+SRPGQ GRCDG ILEG EL FY K L K
Sbjct:   29 LGRPAAMTKIGEKRIHTVRCRGGNLKFRALRLDSGNFSWGTEVCTRKVRVLDVVYNASNNELVRTKTLVKGAIVLVDAHPFKSWYESHYGVKIGIKKGQAAA---EEEEVKQSSHVQRKLAARQKGRSLEDAIDHQIASGRLYAKITSRPGQSGRCDGQILEGAELSFYLKQLKK 200          
BLAST of mRNA_F-serratus_M_contig1247.1874.1 vs. uniprot
Match: A0A6U3PIT0_9STRA (40S ribosomal protein S8 n=3 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A6U3PIT0_9STRA)

HSP 1 Score: 256 bits (655), Expect = 1.300e-84
Identity = 129/176 (73.30%), Postives = 148/176 (84.09%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVHTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVTIGVKKGKKAPPKEEEEEVSKSNHVQRKLASRQKDRKLETLLDDQVSSGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKK 176
            MGRPAAMTK+G KRVH VR RGGNMK+RALRLD+GNFSWGTEV T K R+LDV YNASNNELVRTKTLVK AIV++DAHPFK WYESHYG+ IGVKKG  A     +++V KS+HVQRKLASRQK R+LE  +D+Q++SGR LA I+SRPGQ GRCDG +LEG EL FYQKM+ KK
Sbjct:   29 MGRPAAMTKIGEKRVHGVRGRGGNMKWRALRLDSGNFSWGTEVCTRKVRVLDVTYNASNNELVRTKTLVKGAIVLIDAHPFKSWYESHYGLKIGVKKGSTAL----DDDVKKSDHVQRKLASRQKGRELEQAIDNQMASGRLLAKITSRPGQSGRCDGIVLEGAELHFYQKMMHKK 200          
BLAST of mRNA_F-serratus_M_contig1247.1874.1 vs. uniprot
Match: A0A812SFI7_SYMMI (40S ribosomal protein S8 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SFI7_SYMMI)

HSP 1 Score: 255 bits (651), Expect = 6.920e-84
Identity = 128/177 (72.32%), Postives = 145/177 (81.92%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVHTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVTIGVKKGKKAPPKEEEEEVSKSNHVQRKLASRQKDRKLETLLDDQVSSGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKK 177
            +GRP A TKLG  R+H VRCRGGN+K+RA+RLDTGNFSWG+EV T KTR+LDVVYNASNNELVRTKTLVKN+I+ VDA PF+ WYE HYGV +GVKK KK   + E+ E  KS+ +QRKLA RQK R L+  LDD  SSGR LACISSRPGQ GRCDGYILEGKEL+FY KML KKK
Sbjct:   29 LGRPPANTKLGASRIHTVRCRGGNLKFRAMRLDTGNFSWGSEVCTRKTRVLDVVYNASNNELVRTKTLVKNSIIQVDATPFRAWYEQHYGVKVGVKKAKKTAAEGEDTE-KKSHSLQRKLAERQKTRTLDPALDDGFSSGRLLACISSRPGQSGRCDGYILEGKELDFYSKMLKKKK 204          
BLAST of mRNA_F-serratus_M_contig1247.1874.1 vs. uniprot
Match: A0A485KRP7_9STRA (40S ribosomal protein S8 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KRP7_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.830e-83
Identity = 128/179 (71.51%), Postives = 148/179 (82.68%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVHTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVTIGVKKGKKAPPKEEEEEVSKSNHVQRKLASRQKDRKLETLLDDQVSSGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKKSK 179
            MGR  A TKLG KRV+PVR RGGNMK+RALRLDTGNFSWGTE    KTR+L V+YNASNNELVRT TLVKNAI+ +DA PF++WYE+HYGV IGVKK  +A   ++EEEV +S+HVQRKLA+RQ+ R+L+  LD+Q   GR LACISSRPGQ GRCDGYILEGKELEFYQ+ LA KK K
Sbjct:    1 MGRQPANTKLGAKRVNPVRVRGGNMKFRALRLDTGNFSWGTEAIAHKTRVLIVLYNASNNELVRTNTLVKNAIIQIDATPFRQWYEAHYGVKIGVKKSAEA---DKEEEVKQSSHVQRKLAARQRTRELDPRLDEQFQQGRLLACISSRPGQSGRCDGYILEGKELEFYQRKLATKKQK 176          
BLAST of mRNA_F-serratus_M_contig1247.1874.1 vs. uniprot
Match: M4BLW0_HYAAE (40S ribosomal protein S8 n=5 Tax=Peronosporaceae TaxID=4777 RepID=M4BLW0_HYAAE)

HSP 1 Score: 252 bits (643), Expect = 3.520e-82
Identity = 130/179 (72.63%), Postives = 149/179 (83.24%), Query Frame = 0
Query:    1 MGRPAAMTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVHTCKTRILDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVTIGVKKGKKAPPKEEEEEVSKSNHVQRKLASRQKDRKLETLLDDQVSSGRFLACISSRPGQCGRCDGYILEGKELEFYQKMLAKKKSK 179
            +GR  A TKLG KRVH VR RGG++K+RAL L+TGNFSWGTEV   KTRILDVVYNASNNELVRTKTLVK A+V+VDA PF++WYE+HYGV IG+KK   A   EEEEEV KS+HV RKLA RQ+ R+L++ +DDQV+SGR LA ISSRPGQ GR DGYILEGKELEFYQ+ LA KKSK
Sbjct:   65 IGRQPAATKLGGKRVHTVRVRGGHLKFRALHLETGNFSWGTEVCARKTRILDVVYNASNNELVRTKTLVKGAVVLVDATPFRQWYEAHYGVKIGIKKN--AEKIEEEEEVKKSSHVMRKLAKRQRTRELDSKIDDQVTSGRLLAVISSRPGQSGRADGYILEGKELEFYQRKLATKKSK 241          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1247.1874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHG3_ECTSI1.550e-10587.7140S ribosomal protein S8 n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2USH6_9STRA6.110e-9075.4240S ribosomal protein S8 n=1 Tax=Fibrocapsa japoni... [more]
A0A836CLT8_9STRA2.160e-8872.1340S ribosomal protein S8 n=1 Tax=Tribonema minus T... [more]
A0A7S2JRG2_9STRA4.050e-8675.5740S ribosomal protein S8 n=1 Tax=Leptocylindrus da... [more]
A0A7S1Z304_TRICV5.950e-8673.8640S ribosomal protein S8 n=1 Tax=Trieres chinensis... [more]
B8CB96_THAPS1.590e-8573.7140S ribosomal protein S8 n=2 Tax=Ochrophyta TaxID=... [more]
A0A6U3PIT0_9STRA1.300e-8473.3040S ribosomal protein S8 n=3 Tax=Lithodesmiaceae T... [more]
A0A812SFI7_SYMMI6.920e-8472.3240S ribosomal protein S8 n=1 Tax=Symbiodinium micr... [more]
A0A485KRP7_9STRA2.830e-8371.5140S ribosomal protein S8 n=1 Tax=Aphanomyces stell... [more]
M4BLW0_HYAAE3.520e-8272.6340S ribosomal protein S8 n=5 Tax=Peronosporaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 1..161
e-value: 3.2E-41
score: 140.7
IPR001047Ribosomal protein S8eTIGRFAMTIGR00307TIGR00307coord: 1..163
e-value: 9.4E-33
score: 111.0
IPR001047Ribosomal protein S8ePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 1..178
NoneNo IPR availableGENE3D2.40.10.450coord: 106..179
e-value: 7.8E-17
score: 63.5
NoneNo IPR availableGENE3D2.40.10.450coord: 4..105
e-value: 4.1E-31
score: 109.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1247contigF-serratus_M_contig1247:238348..241969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1247.1874.1mRNA_F-serratus_M_contig1247.1874.1Fucus serratus malemRNAF-serratus_M_contig1247 237395..242047 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1247.1874.1 ID=prot_F-serratus_M_contig1247.1874.1|Name=mRNA_F-serratus_M_contig1247.1874.1|organism=Fucus serratus male|type=polypeptide|length=180bp
MGRPAAMTKLGHKRVHPVRCRGGNMKYRALRLDTGNFSWGTEVHTCKTRI
LDVVYNASNNELVRTKTLVKNAIVVVDAHPFKKWYESHYGVTIGVKKGKK
APPKEEEEEVSKSNHVQRKLASRQKDRKLETLLDDQVSSGRFLACISSRP
GQCGRCDGYILEGKELEFYQKMLAKKKSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022309Ribosomal_S8e/biogenesis_NSA2
IPR001047Ribosomal_S8e