mRNA_F-serratus_M_contig75.18741.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig75.18741.1 vs. uniprot
Match: D7FQB7_ECTSI (UDG domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB7_ECTSI) HSP 1 Score: 364 bits (934), Expect = 1.130e-118 Identity = 190/320 (59.38%), Postives = 227/320 (70.94%), Query Frame = 3
Query: 384 NQNPFDMFSFGTDVTATTP-KATTXXXXRPMPAIDSSADNTRAKKKTRRTKEPRAGQEAPKGLLEKYRSPGQPEWPLRLIVVGHNPSEKAWELGHYYANPSNRMWKLLATADIVPASFTASNDDDCPITSGVGFTDVGFSHPGTISSDFKRTELHAWRQNFYDRLIAHAERAAATVAAANGERKMASTLRADEENTEPTSG------TALNGPADIKDGYPQVVAFAGKRQFEELFFDAGARTRALTKGGKAGRFRFGLQPADLRPPGWPFPARFTDVFVLPSSSGAAAMANETRETPYVALGSHISRRGS-WTRRKSTQ 1319
++NPF+ F+ G + + P T + S D+ KK RT GQ KGL+EKYRSPG+PEWPLRLI+VGHNPSEKAWELGHYY NPSNRMWKLL++A I+P FTASND+DCPITSGVGFTDVGFS PGT+SS+F + ELH+WR+ FYDRL AHAERAAATVAA+ +T R + + G TA A I+DG P+++AFAGKRQ+EELFFDA A+ +A TKGGK G FRFGLQPADLRPPGWPFPA T++FV+PSSSGAAAM NE RETPY LG H+ + G WT R+ Q
Sbjct: 7 DENPFNEFALGASPSGSGPIPGVTRARPAAARLLMDSLDSKPVKKM--RTSTGAKGQSTAKGLVEKYRSPGEPEWPLRLIIVGHNPSEKAWELGHYYGNPSNRMWKLLSSAGIIPPGFTASNDEDCPITSGVGFTDVGFSIPGTVSSEFGKKELHSWRRGFYDRLTAHAERAAATVAASKSYPAEPATERGTDSTSAAGKGADQGVATAATIKAKIEDGCPRIIAFAGKRQWEELFFDASAKDKAKTKGGKTGPFRFGLQPADLRPPGWPFPAERTEMFVVPSSSGAAAMTNEARETPYRDLGQHMLKSGGEWTHRRGQQ 324
BLAST of mRNA_F-serratus_M_contig75.18741.1 vs. uniprot
Match: A0A4D9CYU0_9STRA (UDG domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYU0_9STRA) HSP 1 Score: 200 bits (508), Expect = 5.120e-56 Identity = 111/235 (47.23%), Postives = 134/235 (57.02%), Query Frame = 3
Query: 564 GLLEKYRSPGQPEWPLRLIVVGHNPSEKAWELGHYYANPSNRMWKLLATADIVPASFTASNDDDCPITSGVGFTDVGFSHPGTISSDFKRTELHAWRQNFYDRLIAHAERAAATVAAANGERKMASTLRADEENTEPTSGTALNGPADIKDGYPQVVAFAGKRQFEELFFDAGARTRALTKGGKAGRFRFGLQPADLRPPGWPFPARFTDVFVLPSSSGAAAMANETRETPYVAL 1268
GL EKY G PE PLRL++VGHNPS AW GHYY+NPSNRMW LL I+P +TA +DD CP T G+GFTD+G+ +PGT S+ FK LHAWR++ Y RL++HA RA A P++VAF GKRQF ELFFD+ A K+ +GLQ A RP G+PF A T +FVL SSSGAAAM+N RE PY L
Sbjct: 93 GLREKY---GDPERPLRLVLVGHNPSAAAWRDGHYYSNPSNRMWSLLRNVKIIPEGYTAKDDDRCPSTCGIGFTDLGYGNPGTDSAKFKAPVLHAWRRSLYQRLLSHARRAGAP---------------------------------------PKIVAFTGKRQFRELFFDSKAY--------KSISISYGLQSA--RPDGFPFNANETKLFVLTSSSGAAAMSNAAREMPYQEL 275
BLAST of mRNA_F-serratus_M_contig75.18741.1 vs. uniprot
Match: W7TJD2_9STRA (Uracil-dna glycosylase superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJD2_9STRA) HSP 1 Score: 201 bits (511), Expect = 3.130e-55 Identity = 112/235 (47.66%), Postives = 135/235 (57.45%), Query Frame = 3
Query: 564 GLLEKYRSPGQPEWPLRLIVVGHNPSEKAWELGHYYANPSNRMWKLLATADIVPASFTASNDDDCPITSGVGFTDVGFSHPGTISSDFKRTELHAWRQNFYDRLIAHAERAAATVAAANGERKMASTLRADEENTEPTSGTALNGPADIKDGYPQVVAFAGKRQFEELFFDAGARTRALTKGGKAGRFRFGLQPADLRPPGWPFPARFTDVFVLPSSSGAAAMANETRETPYVAL 1268
GL EKY G PE PLRL++VGHNPS AW GHYY+NPSNRMW LL I+P +TA +DD CP T G+GFTD+G+ +PGT SS+FK LHAWR++ Y RL++HA RA A P++VAF GKRQF ELFFD+ A K+ +GLQ A RP G+PF A T +FVL SSSGAAAM+N RE PY L
Sbjct: 196 GLREKY---GDPERPLRLVLVGHNPSAAAWRDGHYYSNPSNRMWSLLRNVKIIPEGYTAKDDDRCPSTCGIGFTDLGYGNPGTDSSNFKAPVLHAWRRSLYQRLLSHARRAGAP---------------------------------------PKIVAFTGKRQFRELFFDSKAY--------KSISISYGLQSA--RPDGFPFNADETKLFVLTSSSGAAAMSNAAREMPYQEL 378
BLAST of mRNA_F-serratus_M_contig75.18741.1 vs. uniprot
Match: A0A383VAW5_TETOB (UDG domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VAW5_TETOB) HSP 1 Score: 171 bits (433), Expect = 1.230e-44 Identity = 100/243 (41.15%), Postives = 127/243 (52.26%), Query Frame = 3
Query: 561 KGLLEKYRSPGQPEWPLRLIVVGHNPSEKAWELGHYYANPSNRMWKLLATADIVPASFTASNDDDC-PITSGVGFTDVGFSHPGTISSDFKRTELHAWRQNFYDRLIAHAERAAATVAAANGERKMASTLRADEENTEPTSGTALNGPADIKDGYPQVVAFAGKRQFEELF-FDAGARTRALTKGGKAGRFRFGLQPADLRPPGWPFPARFTDVFVLPSSSGAAAMANETRETPYVALGSHIS 1283
KGL EK + PLRLI++GHNPSE AW GHYY+NPSNRMW++L +A I P + DD P GVGFTDVG PGT SS F + WR FY RL AH + A+ ++ + G + G P++VAF GKR + EL DA + R + GLQP PPGWP PA T+V+VL S+SGAA M+N+ RE PY L ++
Sbjct: 115 KGLPEKLGAA-----PLRLILIGHNPSEHAWHTGHYYSNPSNRMWRILESAGITPPGVSGPEADDVMPAAVGVGFTDVGSGQPGTDSSLFTAADFQGWRAAFYARLAAHMKAASDSIGCSCG-----------------------------RCGAPRLVAFTGKRHYLELLNLDASGQQRRGKDRVASAAVTLGLQPQQQLPPGWPLPADKTEVWVLTSTSGAAPMSNQAREAPYRQLAQRLA 323
BLAST of mRNA_F-serratus_M_contig75.18741.1 vs. uniprot
Match: A0A150H3T8_GONPE (UDG domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H3T8_GONPE) HSP 1 Score: 167 bits (422), Expect = 8.040e-44 Identity = 108/252 (42.86%), Postives = 131/252 (51.98%), Query Frame = 3
Query: 558 PKGLLEKYRSPGQPEWPLRLIVVGHNPSEKAWELGHYYANPSNRMWKLLATADIVPASFTASNDDD-CPITSGVGFTDVGFSHPGTISSDFKRTELHAWRQNFYDRLIAHAERAAATVAAANGERKMASTLRADEENTEPTSGTALNGPADIKDGYPQVVAFAGKRQFEELF-FDAGARTRALTKGGKAGRFRFGLQPADLRPPGWPFPARFTDVFVLPSSSGAAAMANETRETPYVALGSHISRRGSWTRR 1307
P+G+ EK + PLRL++VGHNPSE AW+ GHYY+NPSN MW++L + I P + DDD P +GVGF DVG HPGT SS F AW + FY RL AH RAAA++ T G G P++VAF+GKRQF EL R RA T FG P P GWPFP R T+V+V S+SGAAAM E RE PY L ++R W RR
Sbjct: 38 PRGVPEKLG-----DAPLRLVIVGHNPSEHAWQSGHYYSNPSNLMWRILISTGIAPPGTRGAEDDDRLPREAGVGFLDVGCGHPGTDSSSFASEVFDAWSRAFYSRLKAHMARAAASIGC--------------------TCGLC---------GAPRLVAFSGKRQFLELLNVGRSGRDRAKT-------VEFG--PQSELPRGWPFP-RSTEVWVCSSTSGAAAMTKEQREGPYKRLAERLARE-EWPRR 244
BLAST of mRNA_F-serratus_M_contig75.18741.1 vs. uniprot
Match: A0A836CAH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAH3_9STRA) HSP 1 Score: 165 bits (417), Expect = 5.130e-42 Identity = 105/264 (39.77%), Postives = 124/264 (46.97%), Query Frame = 3
Query: 564 GLLEKYRSPGQPEWPLRLIVVGHNPSEKAWELGHYYANPSNRMWKLLATADIVPASFTASNDDDCPITSGVGFTDVGFSHPGTISSDFKRTELHAWRQNFYDRLIAHAERAAATVAAANGERKMASTLRADEENTEPTSGTALN---------------------------GPADIKDGYPQVVAFAGKRQFEELFFDAGARTRALTKGGKAGRFRFGLQPADLRPPGWPFPARFTD--VFVLPSSSGAAAMANETRETPYVAL 1268
GL EK RSPG PEWPLR + VGHNPS AW GH+YA+PSN MW+LL A + P T +D+ PI GVGFTD+G PGT S+ FKR L WR ++RL H RA A + GYP V+AF GKRQ+ ELFF AL K + +GLQ A RPP WPFP V VL SSSGA+A++NE R PY L
Sbjct: 99 GLPEKLRSPGHPEWPLRCVCVGHNPSATAWAKGHFYAHPSNHMWRLLHAAGVSPRPLTCVDDERLPIELGVGFTDLGHDCPGTNSAAFKRDVLRTWRAGLFERLRGHVRRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKLEMEDAAAAPERLGYPHVIAFTGKRQWRELFFGT-PEAEALAK-----KVDYGLQQA--RPPDWPFPPPPNGPLVVVLASSSGASALSNEARIAPYRLL 354
BLAST of mRNA_F-serratus_M_contig75.18741.1 vs. uniprot
Match: A0A5J4XIV9_9CHLO (DNA glycosylase n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XIV9_9CHLO) HSP 1 Score: 160 bits (405), Expect = 6.520e-41 Identity = 97/245 (39.59%), Postives = 123/245 (50.20%), Query Frame = 3
Query: 585 SPGQPE----WPLRLIVVGHNPSEKAWELGHYYANPSNRMWKLLATADIVPASFTASNDDDCPIT-SGVGFTDVGFSHPGTISSDFKRTELHAWRQNFYDRLIAHAERAAATVAAANGERKMASTLRADEENTEPTSGTALNGPADIKDGYPQVVAFAGKRQFEELFFDAGARTRALTKGGKAGRFRFGLQPADLRPPGWPFPARFTDVFVLPSSSGAAAMANETRETPYVALGSHISRRGSWTR 1304
+PG PE PLRLI+VGHNPS+ AW GHYY+NPSN MW++L I P+ T DDC + +GVGFTDVG PGTISS F W FY+RL AH RA+ ++ G K G P +VAF+GKRQ+ EL LTK F P ++RP GWP P T+V+V+ S+SGA+ M E R P+ L + + SW R
Sbjct: 106 APGVPEKLGDHPLRLIIVGHNPSDHAWRTGHYYSNPSNWMWRILIATRIAPSHVTGPQHDDCMASDAGVGFTDVGSGIPGTISSQFDSATFQGWGAGFYERLSAHMSRASDSIGCTCG-----------------------------KCGAPALVAFSGKRQWSELINTGRKGKNKLTK--------FATGPQNMRPEGWPLPDS-TEVWVMTSTSGASPMTTEARMAPWHELSKQLMQL-SWPR 311
BLAST of mRNA_F-serratus_M_contig75.18741.1 vs. uniprot
Match: A0A7S3QS41_DUNTE (Hypothetical protein n=3 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QS41_DUNTE) HSP 1 Score: 159 bits (401), Expect = 2.520e-40 Identity = 100/241 (41.49%), Postives = 126/241 (52.28%), Query Frame = 3
Query: 564 GLLEKYRSPGQPEWPLRLIVVGHNPSEKAWELGHYYANPSNRMWKLLATADIVPASFTASN-DDDCPITSGVGFTDVGFSHPGTISSDFKRTELHAWRQNFYDRLIAHAERAAATVAAANGERKMASTLRADEENTEPTSGTALNGPADIKDGYPQVVAFAGKRQFEELFFDAGARTRALTKGGKAGRFRFGLQPADLRPPGWPFPARFTDVFVLPSSSGAAAMANETRETPYVALGSHIS 1283
GL EK G +PLRLI+VGHNPSE W H YA+ SN MW+LL I P T DD P + GVGFTDVG HPGT SSDF WR++FY+R+ AH +RA E+ + G+ G P +VAF+GKR + EL +AG R ++ K + G+QPA+L PPGWPFPA T V V S+SGA+ M R PY L S ++
Sbjct: 102 GLGEKL---GGGSFPLRLIIVGHNPSEATWAASHVYAHKSNHMWRLLKQTGIAPPETTGPEADDTMPHSVGVGFTDVGTGHPGTKSSDFPTQVFLRWREDFYERMRAH--------------------MRAASESIGCSCGSC---------GAPALVAFSGKRHYMELL-NAGRRGKS-----KIPKVEIGVQPANLLPPGWPFPAS-TQVIVCCSTSGASPMTAAERLAPYQDLASKLA 303
BLAST of mRNA_F-serratus_M_contig75.18741.1 vs. uniprot
Match: A0A835TBZ4_CHLIN (UDG domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TBZ4_CHLIN) HSP 1 Score: 160 bits (406), Expect = 4.170e-40 Identity = 100/239 (41.84%), Postives = 121/239 (50.63%), Query Frame = 3
Query: 585 SPGQPEW----PLRLIVVGHNPSEKAWELGHYYANPSNRMWKLLATADIVPASFTASNDDD--CPITSGVGFTDVGFSHPGTISSDFKRTELHAWRQNFYDRLIAHAERAAATVAAANGERKMASTLRADEENTEPTSGTALNGPADIKDGYPQVVAFAGKRQFEELFFDAGARTRALTKGGKAGRFRFGLQPADLRPPGWPFPARFTDVFVLPSSSGAAAMANETRETPYVALGSHIS 1283
+PG PE PLRL++VGHNPSE AW GHYY+NPSN +W LL I P DD P +GVGF DVG PGT SS FK W + FYDRL AH RAAA++ + G + G P++VAF GKRQF EL + G R R+G Q A PPGWP PA +V+V S+SGAAAM E RE PY L + ++
Sbjct: 163 APGVPEKLGDAPLRLVIVGHNPSEHAWRSGHYYSNPSNHLWPLLRRTGIAPPDRIRGPQDDGLMPAAAGVGFLDVGCGVPGTDSSQFKSEVFEGWSRAFYDRLRAHMRRAAASIGCSCG-----------------------------RCGAPRLVAFTGKRQFLEL----------MNVGAGPARPRYGRQAA--LPPGWPLPAA-CEVWVCSSTSGAAAMTREAREQPYAQLAARLA 359
BLAST of mRNA_F-serratus_M_contig75.18741.1 vs. uniprot
Match: A0A482SFZ9_9ARCH (UDG domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SFZ9_9ARCH) HSP 1 Score: 157 bits (396), Expect = 1.130e-39 Identity = 100/240 (41.67%), Postives = 120/240 (50.00%), Query Frame = 3
Query: 555 APKGLLEKYRSPGQPEWPLRLIVVGHNPSEKAWELGHYYANPSNRMWKLLATADIVPASFTASNDDDCPITSGVGFTDVGFSHPGTISSDFKRTELHAWRQNFYDRLIAHAERAAATVAAANGERKMASTLRADEENTEPTSGTALNGPADIKDGY-PQVVAFAGKRQFEELFFDAGARTRALTKGGKAGRFRFGLQPADLRPPGWPFPARFTDVFVLPSSSGAAAMANETRETPYVALG 1271
A KGL E Y +PG E LRL+++GHNPS +AW GHYYANPSNRMW LL A IVP+ F A++D CP GVGFTDV F T SS F L A F+ RL+AH R N + Y P ++AFAG RQ+ LF + RFGLQ RPP WP + VF+LPS+SGAAAM + RE PY+ LG
Sbjct: 104 AAKGLGEMYCTPGTEEKRLRLLIIGHNPSHQAWTKGHYYANPSNRMWPLLTKAGIVPSHFNANSDLLCPSVCGVGFTDVMFGVGETDSSLFSDEALRACTAPFFARLVAHCHRV--------------------RNNHHXXXXXXXXXXXEDAAAYSPLILAFAGVRQWRCLFPPSSKWET-----------RFGLQTN--RPPNWPPELASSQVFLLPSTSGAAAMTTQQREEPYIQLG 310 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig75.18741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig75.18741.1 >prot_F-serratus_M_contig75.18741.1 ID=prot_F-serratus_M_contig75.18741.1|Name=mRNA_F-serratus_M_contig75.18741.1|organism=Fucus serratus male|type=polypeptide|length=421bp MPCLCVSPPSGFSSPTLRRPHLSSLPAYRICCLLTLVHLQSASFPRRCPEback to top mRNA from alignment at F-serratus_M_contig75:67638..71453- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig75.18741.1 ID=mRNA_F-serratus_M_contig75.18741.1|Name=mRNA_F-serratus_M_contig75.18741.1|organism=Fucus serratus male|type=mRNA|length=3816bp|location=Sequence derived from alignment at F-serratus_M_contig75:67638..71453- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig75:67638..71453- >mRNA_F-serratus_M_contig75.18741.1 ID=mRNA_F-serratus_M_contig75.18741.1|Name=mRNA_F-serratus_M_contig75.18741.1|organism=Fucus serratus male|type=CDS|length=2526bp|location=Sequence derived from alignment at F-serratus_M_contig75:67638..71453- (Fucus serratus male)back to top |