prot_F-serratus_M_contig749.18722.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig749.18722.1
Unique Nameprot_F-serratus_M_contig749.18722.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length288
Homology
BLAST of mRNA_F-serratus_M_contig749.18722.1 vs. uniprot
Match: D8LB77_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB77_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 4.810e-70
Identity = 158/299 (52.84%), Postives = 190/299 (63.55%), Query Frame = 0
Query:    1 MGTLSKNCCWLRNIAVTERGQGRAKTEAASPAVTAPSDHEPKHDHSDLDAKQISRGWGWRLLGTGRHVVAAAATTAATDSVSASTSAPSSL--SGRRNGPQGIIEASPPVVAD-AVTGAMCVEFSPKG-LMSIGIVDGTVLLTRVERYTTGLRSRHKLHISNNMLHKSDSYKLEASLAKET--------DL-EGVGVAGETDYKDARPPPSPSLGREGSMSSLWGVEVHHLYCLSLSSLLGPG---GPREEALGSAGRVLSMCFSADGWALAVGHERALTVWSTEDGTRLVCTTSKNSD 283
            +G LSK  CWLRNIAV +R +  A   +A+ A   P+   P    ++ D      GWGWRLLGTGR+ VAAA      D++S+  S    +  SG                 D A TGA+ VEFS KG LM++ + DGTVLL RVERYT+G+R+RHKL ISN+MLH+SDS++LE  LA ET        D+ EG G  G T   DAR   + +  REG+MSSLWGVEVHHL CLSL   LGPG   G  E  LG AGRVLS+CFSADG ALAVGHE ALTVWSTEDGTRLVCTT+++ D
Sbjct:  298 LGKLSKTTCWLRNIAVADRSRATAAPPSAA-AGRKPNSAAPPSFLANADGDNQEIGWGWRLLGTGRNAVAAAV-----DALSSPRSNTDGVFFSGGDGXXXXXXXXXXXESGDTAGTGAVGVEFSAKGGLMAVALADGTVLLARVERYTSGVRARHKLQISNSMLHRSDSHRLEDYLADETLRAEQGLGDVSEGDGKGGVTSPPDAR---TRTFSREGTMSSLWGVEVHHLNCLSLDPWLGPGDGGGGGESLLGPAGRVLSLCFSADGGALAVGHEGALTVWSTEDGTRLVCTTTESRD 587          
BLAST of mRNA_F-serratus_M_contig749.18722.1 vs. uniprot
Match: A0A835YSR2_9STRA (RIC1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSR2_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.560e-21
Identity = 69/187 (36.90%), Postives = 105/187 (56.15%), Query Frame = 0
Query:  121 FSPKG-LMSIGIVDGTVLLTRVERYTTGLRSRHKLHISNNMLHKSDSYKLE----------ASLAKET-DLEG--VGVAGETDYKDARP-----PPSPSLGREGSMSSLWGVEVHHLYCLSLSSLLGPGGPREEALGSAGRVLSMCFSADGWALAVGHERALTVWSTEDGTRLVCTTSKNSDTGDQG 288
            FS KG L+++ + DG+VLL+RVER+T+G R+   L + + + ++ +S++L+          A LA  T D+ G   G+ G   ++   P     P +P   ++  +++L GVE+H L+ LSL   L  GG           V  +CFS DG ALAVGHE AL +WST+DGTRL C+ +  +  G  G
Sbjct:  162 FSGKGGLLAVALGDGSVLLSRVERFTSGARAGDGLRVMSGLENRRNSFRLDPAERLDPADAAELAAATLDIAGGAEGLGGSGSFQSDVPGGGHAPDTPRSAQQRGIATLAGVEIHQLHSLSLGPYLAAGG-----------VTCLCFSDDGHALAVGHEGALALWSTDDGTRLSCSATGGAGVGGSG 337          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig749.18722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB77_ECTSI4.810e-7052.84SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YSR2_9STRA3.560e-2136.90RIC1 domain-containing protein n=1 Tax=Tribonema m... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig749contigF-serratus_M_contig749:124571..126491 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig749.18722.1mRNA_F-serratus_M_contig749.18722.1Fucus serratus malemRNAF-serratus_M_contig749 124562..126491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig749.18722.1 ID=prot_F-serratus_M_contig749.18722.1|Name=mRNA_F-serratus_M_contig749.18722.1|organism=Fucus serratus male|type=polypeptide|length=288bp
MGTLSKNCCWLRNIAVTERGQGRAKTEAASPAVTAPSDHEPKHDHSDLDA
KQISRGWGWRLLGTGRHVVAAAATTAATDSVSASTSAPSSLSGRRNGPQG
IIEASPPVVADAVTGAMCVEFSPKGLMSIGIVDGTVLLTRVERYTTGLRS
RHKLHISNNMLHKSDSYKLEASLAKETDLEGVGVAGETDYKDARPPPSPS
LGREGSMSSLWGVEVHHLYCLSLSSLLGPGGPREEALGSAGRVLSMCFSA
DGWALAVGHERALTVWSTEDGTRLVCTTSKNSDTGDQG
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