prot_F-serratus_M_contig749.18721.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig749.18721.1
Unique Nameprot_F-serratus_M_contig749.18721.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length214
Homology
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BLAST of mRNA_F-serratus_M_contig749.18721.1 vs. uniprot
Match: D8LB77_ECTSI (SHR-BD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB77_ECTSI)

HSP 1 Score: 298 bits (764), Expect = 6.430e-90
Identity = 143/198 (72.22%), Postives = 161/198 (81.31%), Query Frame = 0 
Query:    1 MYFAYGCPKVLCLRPDLIPGERILAVSFNPPGSLLAIASTSRVCIWSGGKDHFPLSALPVELRGLPGKCLLWKRDSSVLAAVSCSGQLVLLSVKPKPGAKPASERFALPDWFEPQHTRVPTETDGGECDAWADPGEADTAVISTVEAIGSEVSAMCLGRFGQHVLVGTESGAIYGVSWEGQILCCYYIVAVPGAPPRV 198
            MYF YGCPKVL LRP+  PGE+IL V+FNP GSLLA+ASTSR+C+WSGGKDH PL  L + LRGL G  LLWKRDSS+L  VS +G+LVL+SVK + GA+PASERFALPDW EPQH R   E DG E DAWADP EAD A++STVE+IGSE SAMCLGRFGQHVL+GT SG+IYGVSWEGQILCCY IV  P   PRV
Sbjct:   49 MYFVYGCPKVLSLRPEPKPGEQILEVAFNPSGSLLAVASTSRLCLWSGGKDHVPLGTLTLPLRGLAGTSLLWKRDSSLLGIVSSAGKLVLVSVKRRAGARPASERFALPDWIEPQHARTAAENDGEERDAWADPVEADLAMVSTVESIGSEASAMCLGRFGQHVLLGTASGSIYGVSWEGQILCCYDIVPGPSPSPRV 246
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BLAST of mRNA_F-serratus_M_contig749.18721.1 vs. uniprot
Match: A0A6H5KCF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCF3_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 5.910e-50
Identity = 78/115 (67.83%), Postives = 92/115 (80.00%), Query Frame = 0 
Query:    1 MYFAYGCPKVLCLRPDLIPGERILAVSFNPPGSLLAIASTSRVCIWSGGKDHFPLSALPVELRGLPGKCLLWKRDSSVLAAVSCSGQLVLLSVKPKPGAKPASERFALPDWFEPQ 115
            MYF YGCPKVL LRP+   GE+IL V+FNP GSL A+ASTSR+C+WSGGKDH PL  L + LRGL    LLWKRDSS+L  VS +G+LVL+SVK + GA+PASERFALP+W EPQ
Sbjct:    1 MYFVYGCPKVLSLRPEPKRGEQILEVAFNPSGSLFAVASTSRLCLWSGGKDHVPLGILTLPLRGLAATSLLWKRDSSLLGMVSSAGKLVLVSVKRRAGARPASERFALPEWIEPQ 115
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig749.18721.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LB77_ECTSI6.430e-9072.22SHR-BD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KCF3_9PHAE5.910e-5067.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 9..185
e-value: 5.2E-7
score: 30.8
IPR040096RAB6A-GEF complex partner protein 1PANTHERPTHR22746FAMILY NOT NAMEDcoord: 1..182
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 20..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig749contigF-serratus_M_contig749:105403..124177 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig749.18721.1mRNA_F-serratus_M_contig749.18721.1Fucus serratus malemRNAF-serratus_M_contig749 105163..124177 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig749.18721.1 ID=prot_F-serratus_M_contig749.18721.1|Name=mRNA_F-serratus_M_contig749.18721.1|organism=Fucus serratus male|type=polypeptide|length=214bp
MYFAYGCPKVLCLRPDLIPGERILAVSFNPPGSLLAIASTSRVCIWSGGK
DHFPLSALPVELRGLPGKCLLWKRDSSVLAAVSCSGQLVLLSVKPKPGAK
PASERFALPDWFEPQHTRVPTETDGGECDAWADPGEADTAVISTVEAIGS
EVSAMCLGRFGQHVLVGTESGAIYGVSWEGQILCCYYIVAVPGAPPRVGG
APGTGLPDDRTRSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040096Ric1
IPR036322WD40_repeat_dom_sf