prot_F-serratus_M_contig1247.1872.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1247.1872.1
Unique Nameprot_F-serratus_M_contig1247.1872.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length345
Homology
BLAST of mRNA_F-serratus_M_contig1247.1872.1 vs. uniprot
Match: D7FHF8_ECTSI (Ribonuclease HI n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF8_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 6.670e-63
Identity = 133/285 (46.67%), Postives = 173/285 (60.70%), Query Frame = 0
Query:   65 LRMASELTKTEISTMRVKNLREELQNRGLDTAGARPLLQDRLREAAGVERAPRXXXXXXXXXXXXXXXXXXSHSSGNERVGCGRGPINAAEAGAMTSPRALSTVVDNIVAAGPAEIPPGARSSTSSYVLQFDGGSRGNPGPSGAGAVLYRVRESGEREEMWSTSVWVGKGRTCNEAEYSALIEGLRGAKELGVKRLSVEGDSRLVIQQMLGKYK------------------VSSPKMLPLFKKAKAMAESFENLSLCHIDRALNGRADALANLAMDAGESNTAT 331
            +RM + +++T I+ MRV  LREEL +RGLD  G RP+LQ RL EA   E A                    +  +     G  R  +  ++A    SPR         ++    +  PG + ST+ ++LQFDGGSRGNPGPSG GAVLYR+ ESGEREE+WS+SVW+G+ RT NEAEY  LIEGL  A++LG+KRLSVEGDS+LVIQQMLG YK                  V+SPKM PLF++A  ++++F+ L L HI RA N RAD LAN+AMD   S++ T
Sbjct:   62 VRMGAAISRTAIAKMRVAELREELASRGLDNTGIRPVLQGRLIEAKETEWAQAVIDRSRQRERSNTTEPPRAAGT-TAPPGPARSQVATSQAARTPSPRIRQQQQQRGISTSSTK--PGRQRSTT-HLLQFDGGSRGNPGPSGCGAVLYRLDESGEREEVWSSSVWIGEKRTNNEAEYRGLIEGLIAAEKLGIKRLSVEGDSKLVIQQMLGNYKGKQGKTERGGVGGGRGGGVTSPKMQPLFREATTISKAFDALELGHIMRAHNERADDLANIAMDTETSSSCT 342          
BLAST of mRNA_F-serratus_M_contig1247.1872.1 vs. uniprot
Match: A0A6T8JIG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JIG0_9STRA)

HSP 1 Score: 130 bits (327), Expect = 6.090e-33
Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 0
Query:  191 YVLQFDGGSRGNPGPSGAGAVLYRVRESGEREEMWSTSVWVGKGRTCNEAEYSALIEGLRGAKELGVKRLSVEGDSRLVIQQMLGKYKVSSPKMLPLFKKAKAMAESFENLSLCHIDRALNGRADALANLAMDA 324
            Y LQFDGGSRGNPG SGAG V+Y  +     +E+W+ S  + K  T NEAEY+AL++GL+ A+ LG++ L+V+GDS L++ Q+ G+YKV S  + P  + A  +  +F    + HI R  NGRAD LAN+AMD+
Sbjct:   37 YNLQFDGGSRGNPGLSGAGMVIYNDKS----QEVWNGSYLLPKEATNNEAEYTALVKGLQHARRLGIRHLAVQGDSNLIVMQITGRYKVKSQHLKPFHRDAVELRSAFSTFEISHIPREENGRADELANIAMDS 166          
BLAST of mRNA_F-serratus_M_contig1247.1872.1 vs. uniprot
Match: A0A7S2KCF7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF7_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.730e-31
Identity = 67/138 (48.55%), Postives = 92/138 (66.67%), Query Frame = 0
Query:  191 YVLQFDGGSRGNPGPSGAGAVLYRVRESGEREEMWSTSVWVGKGRTCNEAEYSALIEGLRGAKELGVKRLSVEGDSRLVIQQMLGKYKVSSPKMLPLFKKAKAMAESFENLSLCHIDRALNGRADALANLAMDAGESN 328
            YVLQFDGGSRGNPG +GAG VLY   E G   E+W    ++G+  T NEAEY+ L+ GL+ A+ +GV  + V+GDS L+++Q+ GKYK  S K++P F   K++ + F +  + HI R  N RAD LAN AMD  E++
Sbjct:   11 YVLQFDGGSRGNPGTAGAGMVLYD--EVGH--EVWHGRHYLGEHSTNNEAEYTGLLAGLKCARAIGVSNIVVQGDSELIVKQLQGKYKCKSSKLIPYFTSVKSLIKGFNSFEVRHIPREQNFRADELANEAMDWREND 144          
BLAST of mRNA_F-serratus_M_contig1247.1872.1 vs. uniprot
Match: A0A4D9D4W7_9STRA (RNase H type-1 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4W7_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.190e-31
Identity = 68/138 (49.28%), Postives = 97/138 (70.29%), Query Frame = 0
Query:  188 TSSYVLQFDGGSRGNPGPSGAGAVLYRVRESGEREEMWSTSVWVGKGR--TCNEAEYSALIEGLRGAKELGVKRLSVEGDSRLVIQQMLGKYKVSSPKMLPLFKKAKAMAESFENLSLCHIDRALNGRADALANLAMD 323
            T+ Y+L+FDGGSRGNPGP GAG V+Y   E     ++   S+W+G     T NEAEY  L+ GLR AK+LG++R+ VEGDS+LV++Q+LG YKV + ++  L+ +A A+ E+F   S+ H++R+ N  ADALAN A+D
Sbjct:  334 TAQYLLRFDGGSRGNPGPGGAGIVIY---EQASLVQVRGLSLWLGSDPPLTNNEAEYHGLVAGLRAAKKLGIRRICVEGDSQLVVRQILGVYKVRNERLRVLYSEAMALKENFAEFSIRHVERSQNSDADALANRALD 468          
BLAST of mRNA_F-serratus_M_contig1247.1872.1 vs. uniprot
Match: A0A6C0DKZ1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DKZ1_9ZZZZ)

HSP 1 Score: 123 bits (308), Expect = 1.390e-30
Identity = 66/132 (50.00%), Postives = 87/132 (65.91%), Query Frame = 0
Query:  191 YVLQFDGGSRGNPGPSGAGAVLYRVRESGEREEMWSTSVWVGKGRTCNEAEYSALIEGLRGAKELGVKRLSVEGDSRLVIQQMLGKYKVSSPKMLPLFKKAKAMAESFENLSLCHIDRALNGRADALANLAM 322
            Y L+FDG S+GNPGP+GAGAV+Y+       +E+W+ S +VG   T N AEY  LI GL  A ELG+K L V GDS L+I+QM G+YKV S  ++  + KAK ++  F+N+   HI R  N RAD LANL +
Sbjct:   28 YCLKFDGCSKGNPGPAGAGAVIYK-----NDQEIWANSKYVGDKETNNVAEYHGLIMGLSRANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEHYLKAKTLSRLFDNIKYEHIYRKDNTRADELANLGL 154          
BLAST of mRNA_F-serratus_M_contig1247.1872.1 vs. uniprot
Match: A0A6C0DSN1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DSN1_9ZZZZ)

HSP 1 Score: 120 bits (301), Expect = 1.530e-29
Identity = 65/132 (49.24%), Postives = 85/132 (64.39%), Query Frame = 0
Query:  191 YVLQFDGGSRGNPGPSGAGAVLYRVRESGEREEMWSTSVWVGKGRTCNEAEYSALIEGLRGAKELGVKRLSVEGDSRLVIQQMLGKYKVSSPKMLPLFKKAKAMAESFENLSLCHIDRALNGRADALANLAM 322
            Y L+FDG S+GNPGP+GAGAV+Y+       EE+W+ SV+VG   T N AEY+ LI GL  A ELG+K L V GDS L+I+QM G+YKV S  ++  + KAK ++     +   HI R  N RAD LAN  +
Sbjct:   27 YCLKFDGCSKGNPGPAGAGAVIYK-----NDEEIWANSVYVGDKETNNVAEYNGLIMGLTKANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEYYLKAKTLSRFLSEVHYEHIYRKDNTRADELANFGL 153          
BLAST of mRNA_F-serratus_M_contig1247.1872.1 vs. uniprot
Match: A0A6C0ESY5_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ESY5_9ZZZZ)

HSP 1 Score: 120 bits (300), Expect = 2.140e-29
Identity = 68/135 (50.37%), Postives = 90/135 (66.67%), Query Frame = 0
Query:  188 TSSYVLQFDGGSRGNPGPSGAGAVLYRVRESGEREEMWSTSVWVGKGRTCNEAEYSALIEGLRGAKELGVKRLSVEGDSRLVIQQMLGKYKVSSPKMLPLFKKAKAMAESFENLSLCHIDRALNGRADALANLAM 322
            +S + LQFDG S+GNPG SGAGAV+Y   E     E+W  S++VG+  T N AEYS LI GL+ A EL +K + VEGDS LVI+QM G YKV S  +  L ++A  + E+F+++   HI R  N RAD L+NLA+
Sbjct:   26 SSGFRLQFDGCSKGNPGISGAGAVIYNFDE-----EIWWDSLFVGENTTNNYAEYSGLILGLKKAIELDIKEIIVEGDSTLVIKQMKGDYKVYSENLQDLHREALKLCENFDSIQFTHIYRINNKRADYLSNLAI 155          
BLAST of mRNA_F-serratus_M_contig1247.1872.1 vs. uniprot
Match: A0A6C0HQK6_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HQK6_9ZZZZ)

HSP 1 Score: 119 bits (298), Expect = 3.540e-29
Identity = 64/129 (49.61%), Postives = 89/129 (68.99%), Query Frame = 0
Query:  191 YVLQFDGGSRGNPGPSGAGAVLYRVRESGEREEMWSTSVWVGKGRTCNEAEYSALIEGLRGAKELGVKRLSVEGDSRLVIQQMLGKYKVSSPKMLPLFKKAKAMAESFENLSLCHIDRALNGRADALAN 319
            YVL FDG  +GNPGP GAGAV+Y         E+W+  V+VGK  T N AEY+ LI GL+ + +LG+K ++V GDS+LVI+QM G YKV+S  ++ L+K AK + +SF+++S  H+ R  N RAD L+N
Sbjct:   24 YVLFFDGCCKGNPGPGGAGAVIYN-----NGIELWADCVFVGKKITNNIAEYTGLIIGLKQSAKLGIKNIAVNGDSQLVIKQMNGIYKVTSENLVELYKTAKQLEKSFDSISYNHVYRKDNKRADELSN 147          
BLAST of mRNA_F-serratus_M_contig1247.1872.1 vs. uniprot
Match: A0A6C0JZJ6_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0JZJ6_9ZZZZ)

HSP 1 Score: 120 bits (300), Expect = 5.650e-29
Identity = 65/146 (44.52%), Postives = 95/146 (65.07%), Query Frame = 0
Query:  175 AGPAEIP-PGARSSTSSYVLQFDGGSRGNPGPSGAGAVLYRVRESGEREEMWSTSVWVGKGRTCNEAEYSALIEGLRGAKELGVKRLSVEGDSRLVIQQMLGKYKVSSPKMLPLFKKAKAMAESFENLSLCHIDRALNGRADALAN 319
            A P EIP P +  +   Y + FDG S+GNPGP+GAGAV+Y         E+WS +++VG   T N AEY+ ++ GL  A    ++ L+V+GDS +VI+QMLGKYKV S  +L ++++AK + + F+ +   H+ R LN RADAL+N
Sbjct:   45 AKPCEIPCPESDIANPYYCMMFDGCSKGNPGPAGAGAVIYA-----NNVEIWSRAIFVGNRETNNLAEYTGMLLGLNEAVRRNIRVLTVKGDSEVVIKQMLGKYKVKSENLLDIYEQAKDLEKHFDKIDYIHVYRHLNARADALSN 185          
BLAST of mRNA_F-serratus_M_contig1247.1872.1 vs. uniprot
Match: A0A6C0DDA3_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DDA3_9ZZZZ)

HSP 1 Score: 119 bits (297), Expect = 5.720e-29
Identity = 66/132 (50.00%), Postives = 87/132 (65.91%), Query Frame = 0
Query:  191 YVLQFDGGSRGNPGPSGAGAVLYRVRESGEREEMWSTSVWVGKGRTCNEAEYSALIEGLRGAKELGVKRLSVEGDSRLVIQQMLGKYKVSSPKMLPLFKKAKAMAESFENLSLCHIDRALNGRADALANLAM 322
            YVL FDG  + NPGP GAGAVLY      + EE+W  S +VG   T N AEY  LI GL+ A    ++ L+V GDS+LVI+QM G+Y+V S ++L L   AK++AE FEN+S  H+ R  N RAD L+N+A+
Sbjct:   31 YVLYFDGCCKSNPGPGGAGAVLYY-----KGEEIWGASKFVGVRATNNTAEYGGLILGLQEAVIREIRELTVRGDSQLVIKQMRGEYQVKSDRLLELHHSAKSIAEYFENISFQHVYRDKNKRADELSNMAL 157          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1247.1872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF8_ECTSI6.670e-6346.67Ribonuclease HI n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A6T8JIG0_9STRA6.090e-3348.51Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A7S2KCF7_9STRA1.730e-3148.55Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A4D9D4W7_9STRA3.190e-3149.28RNase H type-1 domain-containing protein n=3 Tax=M... [more]
A0A6C0DKZ1_9ZZZZ1.390e-3050.00RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0DSN1_9ZZZZ1.530e-2949.24RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0ESY5_9ZZZZ2.140e-2950.37RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0HQK6_9ZZZZ3.540e-2949.61RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0JZJ6_9ZZZZ5.650e-2944.52RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0DDA3_9ZZZZ5.720e-2950.00RNase H type-1 domain-containing protein n=1 Tax=v... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003034SAP domainSMARTSM00513sap_9coord: 76..110
e-value: 2.3E-7
score: 40.5
IPR003034SAP domainPFAMPF02037SAPcoord: 76..109
e-value: 1.3E-7
score: 31.1
IPR003034SAP domainPROSITEPS50800SAPcoord: 76..110
score: 11.344
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 190..332
e-value: 2.1E-34
score: 120.5
IPR036361SAP domain superfamilyGENE3D1.10.720.30coord: 56..123
e-value: 1.3E-8
score: 36.3
IPR036361SAP domain superfamilySUPERFAMILY68906SAP domaincoord: 74..111
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 195..321
e-value: 6.6E-21
score: 74.4
IPR002156Ribonuclease H domainPROSITEPS50879RNASE_Hcoord: 187..323
score: 11.152
NoneNo IPR availablePANTHERPTHR46387:SF2POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEINcoord: 185..333
NoneNo IPR availablePANTHERPTHR46387FAMILY NOT NAMEDcoord: 185..333
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..344
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 190..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1247contigF-serratus_M_contig1247:161488..173221 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1247.1872.1mRNA_F-serratus_M_contig1247.1872.1Fucus serratus malemRNAF-serratus_M_contig1247 161345..173726 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1247.1872.1 ID=prot_F-serratus_M_contig1247.1872.1|Name=mRNA_F-serratus_M_contig1247.1872.1|organism=Fucus serratus male|type=polypeptide|length=345bp
MAPFLGRAGGLCGAIIQVARRQRCDLQPCSVRLPLFTSSTKSPPLPWDIR
FGSNAYRARKNFPPLRMASELTKTEISTMRVKNLREELQNRGLDTAGARP
LLQDRLREAAGVERAPREPREPRERSSDRPRRPRRSHSSGNERVGCGRGP
INAAEAGAMTSPRALSTVVDNIVAAGPAEIPPGARSSTSSYVLQFDGGSR
GNPGPSGAGAVLYRVRESGEREEMWSTSVWVGKGRTCNEAEYSALIEGLR
GAKELGVKRLSVEGDSRLVIQQMLGKYKVSSPKMLPLFKKAKAMAESFEN
LSLCHIDRALNGRADALANLAMDAGESNTATDSTRPETADSRIP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003034SAP_dom
IPR036397RNaseH_sf
IPR036361SAP_dom_sf
IPR002156RNaseH_domain
IPR012337RNaseH-like_sf