prot_F-serratus_M_contig749.18731.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig749.18731.1
Unique Nameprot_F-serratus_M_contig749.18731.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length571
Homology
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BLAST of mRNA_F-serratus_M_contig749.18731.1 vs. uniprot
Match: A0A6H5KAZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAZ5_9PHAE)

HSP 1 Score: 170 bits (430), Expect = 6.980e-44
Identity = 136/345 (39.42%), Postives = 165/345 (47.83%), Query Frame = 0 
Query:  255 RSTPSFNEYVPPAAFAQVSVQALMQQTSAIIARWKELQEALDVTSDSSTSNLSEQARARASLKRDLTNLTQLADAQTKHMQRIKMRCNQEAPT---------------STGVS----GDSIASTSLLASTTSAGRGGLTREEYNH-PTKASAIPVSAPRGASV---------------VPSPFPDNS--IGAVLMHQGGDDDIRDSLTTVQQDHSEDPAAAWQPTEWPSSTPSPRQTGVPNPPSPVLPPQQVIPLQHRLHNAKQRLDRAEPRNKWVVLVDACLRLMPHEGSAFEQFFVNIQSLLKNFNGPLGAEVAVALQSCFDQRVFDPTDITRAQQRMADIYS 562
            R +P  ++YVPPA  A V+V  L+QQT+  I RW+ELQ+ LDV SDS+++NL+ QA  R+SLKRDLTNL QLADAQTKH Q++K R  Q                   + GV     G + A     A   SA  G  T E Y+  P K   +                           S    NS   GA+LM QG                    A            PS R  G+                       +QR+DR EP NKWVVLVDA LRL P +G+ FE F   IQ+ L N+NG +GAEVA AL SC D RVFDPTDI RAQ+RMADI S
Sbjct:   63 RPSPLLSDYVPPAGLALVNVPVLLQQTACAIVRWEELQKNLDVRSDSASANLAAQAHVRSSLKRDLTNLIQLADAQTKHTQKMKFRQMQAMQXXXXXXXXXXXXXXXXAQGVQPLPGGRNPARGGTGAGLDSARAGVATGEAYDEFPPKRKQVXXXXXXXXXXXXXXXXXXXXXXXXNASSYAASNSGPTGAMLMQQGAGXXXXXXXXXXXXXXXXXXAP-----------PSNRHEGI-----------------------RQRIDRTEPANKWVVLVDASLRLPPGDGTTFEHFTCMIQNFLNNYNGDVGAEVARALGSCLDPRVFDPTDIKRAQERMADICS 373
[Close]
BLAST of mRNA_F-serratus_M_contig749.18731.1 vs. uniprot
Match: D8LB93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB93_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 1.310e-25
Identity = 58/92 (63.04%), Postives = 67/92 (72.83%), Query Frame = 0 
Query:  471 PLQHRLHNAKQRLDRAEPRNKWVVLVDACLRLMPHEGSAFEQFFVNIQSLLKNFNGPLGAEVAVALQSCFDQRVFDPTDITRAQQRMADIYS 562
            P  +R    +QR+DR EP NKWVVLVDA LRL P +G+ FE F   IQ+ L N+NG +GAEVA AL SC D RVFDPTDI RAQ+RMADI S
Sbjct:  134 PPSNRHEGIRQRIDRTEPANKWVVLVDASLRLPPGDGTTFEHFTCMIQNFLNNYNGDVGAEVARALGSCLDPRVFDPTDIKRAQERMADICS 225
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig749.18731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KAZ5_9PHAE6.980e-4439.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB93_ECTSI1.310e-2563.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig749contigF-serratus_M_contig749:253642..257782 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig749.18731.1mRNA_F-serratus_M_contig749.18731.1Fucus serratus malemRNAF-serratus_M_contig749 253630..258870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig749.18731.1 ID=prot_F-serratus_M_contig749.18731.1|Name=mRNA_F-serratus_M_contig749.18731.1|organism=Fucus serratus male|type=polypeptide|length=571bp
MDTRGSLHGPPDLPMMGGGFGDTHSFQHPEGGRPHIDGPARFGVPELDVG
HAQNHGLVQTYDHGGLQSPTSASLEEHRFATPPTSFPMPMSSIGSFETGG
MVNAHGSAPRQTSTPQPWPASPRDYRNQQPDLDVNSITQALQQPDQAQMH
LQQELLQMEQRQQSQHGVEQDNRQQSAGTLSNSCAGFERLGQQSKQQQQQ
QQRKLQQRQEHRRMNGQVTSLEQYEPSGRCGQQQPQQMQRSWQGNQQNQQ
RGQTRSTPSFNEYVPPAAFAQVSVQALMQQTSAIIARWKELQEALDVTSD
SSTSNLSEQARARASLKRDLTNLTQLADAQTKHMQRIKMRCNQEAPTSTG
VSGDSIASTSLLASTTSAGRGGLTREEYNHPTKASAIPVSAPRGASVVPS
PFPDNSIGAVLMHQGGDDDIRDSLTTVQQDHSEDPAAAWQPTEWPSSTPS
PRQTGVPNPPSPVLPPQQVIPLQHRLHNAKQRLDRAEPRNKWVVLVDACL
RLMPHEGSAFEQFFVNIQSLLKNFNGPLGAEVAVALQSCFDQRVFDPTDI
TRAQQRMADIYSQCARRVQR*
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