mRNA_F-serratus_M_contig7481.18718.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7481.18718.1 vs. uniprot
Match: O82433_FUCDI (Vanadium bromoperoxidase n=1 Tax=Fucus distichus TaxID=3012 RepID=O82433_FUCDI) HSP 1 Score: 178 bits (452), Expect = 5.310e-51 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1
Query: 1 MGGFPNLDAVSIGSDGTVDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNGGPPAGP 255
MGGFPNLDAVSIGSDGTVDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNGGPPAGP
Sbjct: 290 MGGFPNLDAVSIGSDGTVDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNGGPPAGP 374
BLAST of mRNA_F-serratus_M_contig7481.18718.1 vs. uniprot
Match: PRXV_ASCNO (Vanadium-dependent bromoperoxidase n=1 Tax=Ascophyllum nodosum TaxID=52969 RepID=PRXV_ASCNO) HSP 1 Score: 170 bits (431), Expect = 1.230e-48 Identity = 80/85 (94.12%), Postives = 83/85 (97.65%), Query Frame = 1
Query: 1 MGGFPNLDAVSIGSDGTVDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNGGPPAGP 255
M GFPNLDAVSIGSDGTVDP SQLFRATFVGVETGPF+SQLLVNSFTID+ITVEPKQETFAPD+NYMVDFDEWLNIQNGGPPAGP
Sbjct: 171 MEGFPNLDAVSIGSDGTVDPLSQLFRATFVGVETGPFISQLLVNSFTIDSITVEPKQETFAPDVNYMVDFDEWLNIQNGGPPAGP 255
BLAST of mRNA_F-serratus_M_contig7481.18718.1 vs. uniprot
Match: A0A3G3BM28_SACJA (Vanadium-dependent iodine peroxidase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A3G3BM28_SACJA) HSP 1 Score: 113 bits (282), Expect = 2.540e-27 Identity = 54/85 (63.53%), Postives = 67/85 (78.82%), Query Frame = 1
Query: 1 MGGFPNLDAVSIGSDGTVDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNGGPPAGP 255
M GF +L+ V++G DG+ DP +QLFR++ VGVE GP VSQLLVN+FTID+ITVE KQ TFAP +YM +FDEWL+IQNG P P
Sbjct: 219 MPGFADLNFVAVGPDGSPDPLTQLFRSSAVGVEIGPHVSQLLVNNFTIDSITVEAKQNTFAPGEDYMAEFDEWLSIQNGEFPVEP 303
BLAST of mRNA_F-serratus_M_contig7481.18718.1 vs. uniprot
Match: B7ZGM6_9PHAE (Putative vanadium-dependent iodoperoxidase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM6_9PHAE) HSP 1 Score: 107 bits (268), Expect = 1.960e-25 Identity = 51/82 (62.20%), Postives = 60/82 (73.17%), Query Frame = 1
Query: 1 MGGFPNLDAVSIGSDGTVDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNGGPP 246
M GF N+ V++ DG DP SQLFR + GVETGPF+SQLLV FTID+ITV P Q+TF P +YM D+DEWL IQNGG P
Sbjct: 225 MPGFQNMVGVAVDRDGRADPQSQLFRTSAFGVETGPFISQLLVQDFTIDSITVAPIQKTFEPGADYMADYDEWLFIQNGGVP 306
BLAST of mRNA_F-serratus_M_contig7481.18718.1 vs. uniprot
Match: Q4LDE6_9PHAE (Vanadium-dependent iodoperoxidase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q4LDE6_9PHAE) HSP 1 Score: 101 bits (252), Expect = 2.970e-23 Identity = 49/83 (59.04%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 1 MGGFPNLDAVSIGSDGT-VDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNGGPP 246
M GF ++ V++ + DP SQLFR++ GVETGPF+SQLLV FTID+ITV P Q+TFAP +YM D+DEWL+IQNGG P
Sbjct: 225 MPGFADIVGVAVDPETRRADPQSQLFRSSAFGVETGPFISQLLVKDFTIDSITVTPMQKTFAPGADYMTDYDEWLSIQNGGSP 307
BLAST of mRNA_F-serratus_M_contig7481.18718.1 vs. uniprot
Match: A0ZCI9_NODSP (Uncharacterized protein n=2 Tax=Nodularia spumigena TaxID=70799 RepID=A0ZCI9_NODSP) HSP 1 Score: 70.9 bits (172), Expect = 2.000e-12 Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 16 NLDAVSIGSDGTVDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNGG 240
+ D +G+ T + LFR + G GP++SQ L+ ++T+ +Q+T PD+NY+ D+DEWLN+QNGG
Sbjct: 181 DFDGPKVGASVTPET---LFRGNYAGDLVGPYISQFLLKDIPYGSLTISQRQKTVQPDINYLTDYDEWLNVQNGG 252
BLAST of mRNA_F-serratus_M_contig7481.18718.1 vs. uniprot
Match: A0A7S4V9V9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V9V9_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.270e-11 Identity = 29/65 (44.62%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 49 TVDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNGGP 243
++DP ++LFR G GP VSQ L + ID I ++PK T AP+ +Y+ DF EW +QNG P
Sbjct: 87 SIDPQTELFRLDIFGTTRGPIVSQFLYHDIYIDGIPIKPKHRTCAPNTDYLTDFVEWREVQNGKP 151
BLAST of mRNA_F-serratus_M_contig7481.18718.1 vs. uniprot
Match: A0A2R5FTI7_NOSCO (Twin-arginine translocation pathway signal n=1 Tax=Nostoc commune NIES-4072 TaxID=2005467 RepID=A0A2R5FTI7_NOSCO) HSP 1 Score: 67.4 bits (163), Expect = 2.970e-11 Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 43 DGTVDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNGG 240
DG + P + LFR G GP++SQLL+ ++T+ KQ+T D+NY+ D++ WLNIQNGG
Sbjct: 188 DGCITP-ATLFRGIHTGDLVGPYISQLLLKDIPFGSLTISQKQKTVQRDINYLTDYETWLNIQNGG 252
BLAST of mRNA_F-serratus_M_contig7481.18718.1 vs. uniprot
Match: UPI00187FF134 (vanadium-dependent haloperoxidase n=1 Tax=unclassified Nodularia TaxID=2656917 RepID=UPI00187FF134) HSP 1 Score: 67.0 bits (162), Expect = 4.530e-11 Identity = 24/56 (42.86%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 70 LFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNG 237
LFR + G GP++SQ L+ ++T+ +Q+T PD+NY+ D+D+WLN+QNG
Sbjct: 199 LFRGNYAGDLVGPYISQFLLKDIPYGSLTISQRQKTVLPDINYLTDYDDWLNVQNG 254
BLAST of mRNA_F-serratus_M_contig7481.18718.1 vs. uniprot
Match: UPI0019EFA36E (Vanadium-dependent haloperoxidase n=1 Tax=Nostocales cyanobacterium LEGE 11386 TaxID=1828825 RepID=UPI0019EFA36E) HSP 1 Score: 65.5 bits (158), Expect = 1.580e-10 Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 43 DGTVDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAITVEPKQETFAPDLNYMVDFDEWLNIQNGG 240
+G + P LFR + G GP++SQ L+ ++T+ +QET +++YM ++DEWLN+QNGG
Sbjct: 206 EGKITP-ETLFRGNYAGDLVGPYISQFLLKDIPYGSLTISQRQETVVANVDYMTEYDEWLNVQNGG 270 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7481.18718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7481.18718.1 >prot_F-serratus_M_contig7481.18718.1 ID=prot_F-serratus_M_contig7481.18718.1|Name=mRNA_F-serratus_M_contig7481.18718.1|organism=Fucus serratus male|type=polypeptide|length=85bp MGGFPNLDAVSIGSDGTVDPFSQLFRATFVGVETGPFVSQLLVNSFTIDAback to top mRNA from alignment at F-serratus_M_contig7481:5548..6362- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7481.18718.1 ID=mRNA_F-serratus_M_contig7481.18718.1|Name=mRNA_F-serratus_M_contig7481.18718.1|organism=Fucus serratus male|type=mRNA|length=815bp|location=Sequence derived from alignment at F-serratus_M_contig7481:5548..6362- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7481:5548..6362- >mRNA_F-serratus_M_contig7481.18718.1 ID=mRNA_F-serratus_M_contig7481.18718.1|Name=mRNA_F-serratus_M_contig7481.18718.1|organism=Fucus serratus male|type=CDS|length=510bp|location=Sequence derived from alignment at F-serratus_M_contig7481:5548..6362- (Fucus serratus male)back to top |