prot_F-serratus_M_contig746.18695.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig746.18695.1
Unique Nameprot_F-serratus_M_contig746.18695.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length175
Homology
BLAST of mRNA_F-serratus_M_contig746.18695.1 vs. uniprot
Match: A0A5N6NCI1_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NCI1_9ASTR)

HSP 1 Score: 102 bits (253), Expect = 2.790e-22
Identity = 59/163 (36.20%), Postives = 90/163 (55.21%), Query Frame = 0
Query:    1 MVYVDGLLVASETKRDEENVMEDLRSCFPIRYLGGAGFYLGCPITRDLDARTLELDQHLYVRTVDSRFNIEKASTTSAAAAENPLFKD-DVPQTEAEAEEIRVIPYRAAVEALMWAATMTCSDVAYAAHQLGKINDNPGPVLWRAAKRTPQYLWRTKDVGITY 162
            ++YVD +L+AS +          L S F ++ LG A + +G  I RD  + TL L Q  Y+  V +R+N++  S   A   +  +F     P+TE E E++R+IPY + V ++M+A   T  D+AY A  LG+   NPG   W+A K+  +YL  TKD  +TY
Sbjct:  230 VIYVDDILLASNSLDMLHESKRLLSSNFDMKDLGEASYVIGIEIHRDRASGTLGLSQKAYINRVLTRYNMQHCSPLVAPVVKGDVFGTFQCPKTEVEKEQMRLIPYASVVGSIMYANVCTRPDIAYIAGMLGRYQSNPGLDHWKATKKVLRYLQGTKDYKLTY 392          
BLAST of mRNA_F-serratus_M_contig746.18695.1 vs. uniprot
Match: A0A5N6QA02_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6QA02_9ASTR)

HSP 1 Score: 97.4 bits (241), Expect = 2.550e-20
Identity = 59/163 (36.20%), Postives = 89/163 (54.60%), Query Frame = 0
Query:    1 MVYVDGLLVASETKRDEENVMEDLRSCFPIRYLGGAGFYLGCPITRDLDARTLELDQHLYVRTVDSRFNIEKASTTSAAAAENPLFKD-DVPQTEAEAEEIRVIPYRAAVEALMWAATMTCSDVAYAAHQLGKINDNPGPVLWRAAKRTPQYLWRTKDVGITY 162
            ++YVD +L+AS +          L   F ++ LG A + +G  I RD     L L Q  Y+  V +R+N++  S + A   +  +F     P+TEAE  ++R+IPY + V +LM+A   T  D+AY A  LG+   NPG   W+AAK+  +YL  TKD  +TY
Sbjct:  605 VLYVDDILLASNSLDMLHESKRLLSHNFDMKDLGEASYVIGIEIHRDRVNGLLGLSQKAYIDRVLTRYNMQHCSPSVAPVVKGDVFGSFQCPKTEAEKAQMRMIPYASVVGSLMYAQVCTRPDIAYIAGMLGRYQTNPGLDHWKAAKKVLRYLQGTKDFKLTY 767          
BLAST of mRNA_F-serratus_M_contig746.18695.1 vs. uniprot
Match: A0A5N6MU84_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Heliantheae alliance TaxID=911341 RepID=A0A5N6MU84_9ASTR)

HSP 1 Score: 96.3 bits (238), Expect = 4.810e-20
Identity = 58/163 (35.58%), Postives = 89/163 (54.60%), Query Frame = 0
Query:    1 MVYVDGLLVASETKRDEENVMEDLRSCFPIRYLGGAGFYLGCPITRDLDARTLELDQHLYVRTVDSRFNIEKASTTSAAAAENPLFKD-DVPQTEAEAEEIRVIPYRAAVEALMWAATMTCSDVAYAAHQLGKINDNPGPVLWRAAKRTPQYLWRTKDVGITY 162
            ++YVD +L+AS +          L   F ++ LG A + +G  I RD  +  L L Q  Y+  V +R+N++  S + A   +  +F     P+TEAE  ++R+IPY + V +LM+A   T  D+AY    LG+   NPG   W+AAK+  +YL  TKD  +TY
Sbjct:  169 VLYVDDILLASNSLDMLHESKRLLSHNFDMKDLGEASYVIGIEIHRDRVSGLLGLSQKAYIDRVLTRYNMQHCSPSVAPVVKGDVFGSFQCPKTEAEKAQMRMIPYASVVGSLMYAQVCTRPDIAYIFGMLGRYQTNPGLDHWKAAKKVLRYLQGTKDFKLTY 331          
BLAST of mRNA_F-serratus_M_contig746.18695.1 vs. uniprot
Match: A0A5N6M1Y8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M1Y8_9ASTR)

HSP 1 Score: 96.3 bits (238), Expect = 5.750e-20
Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = 0
Query:    1 MVYVDGLLVASETKRDEENVMEDLRSCFPIRYLGGAGFYLGCPITRDLDARTLELDQHLYVRTVDSRFNIEKASTTSAAAAENPLFKD-DVPQTEAEAEEIRVIPYRAAVEALMWAATMTCSDVAYAAHQLGKINDNPGPVLWRAAKRTPQYLWRTKDVGITY 162
            ++YVD +L+AS            L + F ++ LG A + +G  I R+    TL L Q  Y+  +  RFN+++ S + A   +   F     P++EAE +++R+IPY + V +LM+A   T  D+AY    LG+   NPG   W+AAK+  +YL  TK+  +TY
Sbjct:  304 VLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSVAPVVKGDNFGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAYITGMLGRYQSNPGLDHWKAAKKVLRYLQGTKEYKLTY 466          
BLAST of mRNA_F-serratus_M_contig746.18695.1 vs. uniprot
Match: A0A5N6MC51_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MC51_9ASTR)

HSP 1 Score: 96.3 bits (238), Expect = 6.480e-20
Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = 0
Query:    1 MVYVDGLLVASETKRDEENVMEDLRSCFPIRYLGGAGFYLGCPITRDLDARTLELDQHLYVRTVDSRFNIEKASTTSAAAAENPLFKD-DVPQTEAEAEEIRVIPYRAAVEALMWAATMTCSDVAYAAHQLGKINDNPGPVLWRAAKRTPQYLWRTKDVGITY 162
            ++YVD +L+AS            L + F ++ LG A + +G  I R+    TL L Q  Y+  +  RFN+++ S + A   +   F     P++EAE +++R+IPY + V +LM+A   T  D+AY    LG+   NPG   W+AAK+  +YL  TK+  +TY
Sbjct:  387 VLYVDDILLASNNLDMLYESKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSVAPVVKGDNFGSYQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAYITGMLGRYQSNPGLDHWKAAKKVLRYLQGTKEYKLTY 549          
BLAST of mRNA_F-serratus_M_contig746.18695.1 vs. uniprot
Match: A0A8K0JMY5_9TREE (Uncharacterized protein n=1 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JMY5_9TREE)

HSP 1 Score: 95.5 bits (236), Expect = 1.240e-19
Identity = 55/168 (32.74%), Postives = 92/168 (54.76%), Query Frame = 0
Query:    1 MVYVDGLLVASETKRDEENVMEDLRSCFPIRYLGGAGFYLGCPITRDLDARTLELDQHLYVRTVDSRFNIEKASTTSAAAAENPLFKDDVPQ---TEAEAEEIRVIPYRAAVEALMWAATMTCSDVAYAAHQLGKINDNPGPVLWRAAKRTPQYLWRTKDVGITYGGT 165
            ++YVD LL+ S +    E+V + L   F I+ LG    YLG  I RD   R +++ Q  Y+  +  R+ +  ++ T+      P+  DD+     TE++ +E++ IPY + + +L++A+  +  D++YA   L + + NP P  W+AAKR  +YL  T    ITY GT
Sbjct: 1210 IIYVDDLLMFSNSAFHMEDVEKHLEGVFDIKKLGDPKVYLGLEIRRDRSKREIKISQTRYITEMIDRYGL--STETTGRQITTPMTSDDLTNLVVTESDRQEMKNIPYLSLIGSLLYASNGSRPDISYAVSLLARFSTNPHPRHWQAAKRVLRYLRLTTQYHITYAGT 1375          
BLAST of mRNA_F-serratus_M_contig746.18695.1 vs. uniprot
Match: A0A5N6PN55_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PN55_9ASTR)

HSP 1 Score: 94.0 bits (232), Expect = 1.850e-19
Identity = 55/163 (33.74%), Postives = 89/163 (54.60%), Query Frame = 0
Query:    1 MVYVDGLLVASETKRDEENVMEDLRSCFPIRYLGGAGFYLGCPITRDLDARTLELDQHLYVRTVDSRFNIEKASTTSAAAAENPLFKD-DVPQTEAEAEEIRVIPYRAAVEALMWAATMTCSDVAYAAHQLGKINDNPGPVLWRAAKRTPQYLWRTKDVGITY 162
            ++YV+ +L+AS       +    L + F ++ LG A + +G  I R+    TL L Q  Y+  +  RFN+++ S + A   +   F     P++EAE +++R+IPY + V +LM+A   T  D+AY    LG+   NPG   W+AAK   +YL  TK+  +TY
Sbjct:  169 VLYVNDILLASNNLGMLYDSKRLLSANFDMKDLGEASYVIGIEIHRNRSIGTLGLSQKAYIERILKRFNMQQCSPSIAPVVKGDSFGSFQCPKSEAEIDQMRLIPYASVVGSLMYAQVCTRPDIAYITGMLGRYQSNPGLDHWKAAKMVLRYLQGTKEYKLTY 331          
BLAST of mRNA_F-serratus_M_contig746.18695.1 vs. uniprot
Match: A0A251UJK4_HELAN (Putative zinc finger, CCHC-type n=7 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UJK4_HELAN)

HSP 1 Score: 94.7 bits (234), Expect = 2.270e-19
Identity = 57/163 (34.97%), Postives = 86/163 (52.76%), Query Frame = 0
Query:    1 MVYVDGLLVASETKRDEENVMEDLRSCFPIRYLGGAGFYLGCPITRDLDARTLELDQHLYVRTVDSRFNIEKASTTSAAAAENPLFKD-DVPQTEAEAEEIRVIPYRAAVEALMWAATMTCSDVAYAAHQLGKINDNPGPVLWRAAKRTPQYLWRTKDVGITY 162
            ++YVD +L+AS +          L   F ++ LG A + +G  I RD     L L Q  Y+  V +R+N+++   + A   +  +F     P TE E E++  IPY + V +LM+A   T  D+AY A  LG+   NPG   W+AAK+  +YL  TKD  +TY
Sbjct:  989 VLYVDDILLASNSLDMLHESKRLLSHNFDMKDLGDASYVIGIEIHRDRHKGILGLSQKAYIDRVLTRYNMQQCKPSVAPVVKGDVFGSFQCPTTEVEKEQMSQIPYASVVGSLMYAQVCTRPDIAYIAGMLGRYQTNPGLDHWKAAKKVLRYLQGTKDYKLTY 1151          
BLAST of mRNA_F-serratus_M_contig746.18695.1 vs. uniprot
Match: UPI001E1BA9BB (uncharacterized protein LOC116922675 n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA9BB)

HSP 1 Score: 93.6 bits (231), Expect = 2.920e-19
Identity = 57/165 (34.55%), Postives = 91/165 (55.15%), Query Frame = 0
Query:    3 YVDGLLVASETKRDEENVMEDLRSCFPIRYLGGAGFYLGCPITRDLDARTLELDQHLYVRTVDSRFNIEKASTTSAAAAEN-PLFKDDVPQTEAEAEEIRVIPYRAAVEALMWAATMTCSDVAYAAHQLGKINDNPGPVLWRAAKRTPQYLWRTKDVGITYGGTP 166
            +VD  L+    ++  E  ++ L++ F +R L  AG +LG  I R+ + R L + Q   V T+  +F +   ++ S  A     L  +  PQT+ E EE++ IPY+ AV AL++ +T T  D++YA  Q+ K N NPG   W+A KR  +YL  T++ GI +   P
Sbjct:  178 FVDDGLICGTNEKTLEKFVDHLKTKFELRTLP-AGRFLGITIDRNRERRHLSISQPDAVDTILKKFKMGDCNSVSTPAEPGLKLSLNMSPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRIFRYLAGTREYGILFSPNP 341          
BLAST of mRNA_F-serratus_M_contig746.18695.1 vs. uniprot
Match: A0A2N9J0G2_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9J0G2_FAGSY)

HSP 1 Score: 94.0 bits (232), Expect = 4.150e-19
Identity = 53/163 (32.52%), Postives = 87/163 (53.37%), Query Frame = 0
Query:    2 VYVDGLLVASETKRDEENVMEDLRSCFPIRYLGGAGFYLGCPITRDLDARTLELDQHLYVRTVDSRFNIEKASTTSAAAAENPLFKDDVPQT-EAEAEEIRVIPYRAAVEALMWAATMTCSDVAYAAHQLGKINDNPGPVLWRAAKRTPQYLWRTKDVGITYG 163
            +YVD +L+AS +    +     L S F ++ +G A + LG  I+RD D++ + LDQ  Y++ V  RF +E     S   ++  +    +  T + E EE++ +PY   V +LM+A T T SD+ Y    + +   NPG   W+A KR  +YL  TK + + +G
Sbjct:  842 IYVDDILLASNSPDMMKETKFCLGSKFEMKDMGPANYVLGIRISRDRDSKLIYLDQENYLKKVLKRFKMEDYRPVSTPVSKGTILNKSMCLTNKTELEEMKAVPYAQTVGSLMYAMTSTKSDICYTVGLVSRYQSNPGKAHWQAVKRIFRYLQMTKSMKLCFG 1004          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig746.18695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5N6NCI1_9ASTR2.790e-2236.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6QA02_9ASTR2.550e-2036.20Integrase catalytic domain-containing protein n=1 ... [more]
A0A5N6MU84_9ASTR4.810e-2035.58Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6M1Y8_9ASTR5.750e-2034.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6MC51_9ASTR6.480e-2034.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8K0JMY5_9TREE1.240e-1932.74Uncharacterized protein n=1 Tax=Filobasidium flori... [more]
A0A5N6PN55_9ASTR1.850e-1933.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A251UJK4_HELAN2.270e-1934.97Putative zinc finger, CCHC-type n=7 Tax=Helianthus... [more]
UPI001E1BA9BB2.920e-1934.55uncharacterized protein LOC116922675 n=1 Tax=Daphn... [more]
A0A2N9J0G2_FAGSY4.150e-1932.52Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..76
e-value: 7.5E-7
score: 29.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig746contigF-serratus_M_contig746:144840..145364 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig746.18695.1mRNA_F-serratus_M_contig746.18695.1Fucus serratus malemRNAF-serratus_M_contig746 144417..145952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig746.18695.1 ID=prot_F-serratus_M_contig746.18695.1|Name=mRNA_F-serratus_M_contig746.18695.1|organism=Fucus serratus male|type=polypeptide|length=175bp
MVYVDGLLVASETKRDEENVMEDLRSCFPIRYLGGAGFYLGCPITRDLDA
RTLELDQHLYVRTVDSRFNIEKASTTSAAAAENPLFKDDVPQTEAEAEEI
RVIPYRAAVEALMWAATMTCSDVAYAAHQLGKINDNPGPVLWRAAKRTPQ
YLWRTKDVGITYGGTPGSCTKLSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2