mRNA_F-serratus_M_contig1247.1869.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1247.1869.1
Unique NamemRNA_F-serratus_M_contig1247.1869.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1247.1869.1 vs. uniprot
Match: A0A6H5LBF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBF2_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 4.340e-116
Identity = 191/285 (67.02%), Postives = 237/285 (83.16%), Query Frame = 2 
Query:  293 NFAAYWDMLRPHNVPASFGLVAAGALAASHRIATILDPKVLLTAWAAASVAMGSCVLNDWFDMDIDRVNKPDRPLVTGEVVPEHAVAIGTVLLLGALASAWAVHPAALQATIAASVVLTSAYTPVLKPIPVVKNLVVAGVVAAAIASGGLASGTGIAATLSPSLLTFFTIAYREILMDVSDVEGDRAAGVRTIPVLLGRESAMAIASALLTAGVVAGGAGILTAGATSPSRYAAAGLSALFAAPSYANVLLVVRSGFSQQRLSSAVDQALGPLALTLGLMGIALR 1147
            N +AYW++LRP+N+PASFGLVAAGAL ASH    +L+PKVLLTA+AAA+V++GSCVLNDWFD+++DRVN+P+RPLVTGEVVP HA+ IG   LL A+ASA  V+PAALQATI ASV LT AYTP+LKPIP+VKN VVA V+AAAI +GGLA+G G+A+TL+PS+LTFF I +RE+LMD++DVEGDR AGVRT+PVL+GR++A+  A+ALL+ GV A G GIL  G   P R AAA LSALF  P Y N+ LV RS +S++RLSSA++Q LGPLAL LGLMG+ LR
Sbjct:  132 NLSAYWEILRPNNIPASFGLVAAGALVASHTAVALLEPKVLLTAFAAAAVSVGSCVLNDWFDIELDRVNEPERPLVTGEVVPVHALGIGVAFLLAAVASASFVNPAALQATIVASVALTLAYTPLLKPIPLVKNFVVAMVIAAAIGAGGLAAGAGVASTLTPSVLTFFVIGHREVLMDIADVEGDREAGVRTLPVLMGRQAALVFATALLSVGVGAAGVGILE-GTADPERPAAAALSALFVLPLYVNLFLVGRSSYSKERLSSAIEQTLGPLALVLGLMGVVLR 415
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BLAST of mRNA_F-serratus_M_contig1247.1869.1 vs. uniprot
Match: D8LD89_ECTSI (Prenyltransferase, UbiA family, Putative 4-hydroxybenzoate octaprenyltransferase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD89_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 4.890e-89
Identity = 148/230 (64.35%), Postives = 188/230 (81.74%), Query Frame = 2 
Query:  269 STPKNKTPNFAAYWDMLRPHNVPASFGLVAAGALAASHRIATILDPKVLLTAWAAASVAMGSCVLNDWFDMDIDRVNKPDRPLVTGEVVPEHAVAIGTVLLLGALASAWAVHPAALQATIAASVVLTSAYTPVLKPIPVVKNLVVAGVVAAAIASGGLASGTGIAATLSPSLLTFFTIAYREILMDVSDVEGDRAAGVRTIPVLLGRESAMAIASALLTAGVVAGGAGIL 958
            S+ + K+PN +AYW++LRP+N+PASFGLVAAGAL ASH    + +PKVLLTA+AAA+V++GSCVLNDWFD+++DRVN+P+RPLVTGEVVP HA+ IG   LL A+ASA  V+PAALQATI ASV LT AYTP+LKPIP+VKN VVA V+             G+A+TL+PS+LTFF I +RE+LMD++DVEGDR AGVRT+PVL+GR++A+  A+ALL+AGVVA G GIL
Sbjct:    6 SSKEKKSPNLSAYWEILRPNNIPASFGLVAAGALVASHTAVALFEPKVLLTAFAAAAVSVGSCVLNDWFDIELDRVNEPERPLVTGEVVPVHALGIGVAFLLAAVASASFVNPAALQATIVASVALTLAYTPLLKPIPLVKNFVVAMVIXXXXXXXXXXXXAGVASTLTPSVLTFFVIGHREVLMDIADVEGDREAGVRTLPVLMGRQAALVFATALLSAGVVAAGVGIL 235
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BLAST of mRNA_F-serratus_M_contig1247.1869.1 vs. uniprot
Match: A0A2V0P9S4_9CHLO (Geranylgeranylglycerol-phosphate geranylgeranyltransferase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P9S4_9CHLO)

HSP 1 Score: 142 bits (359), Expect = 3.830e-34
Identity = 90/220 (40.91%), Postives = 129/220 (58.64%), Query Frame = 2 
Query:  293 NFAAYWD---------MLRPHNVPASFGLVAAGALAASHRIATILDPKVLLTAWAAASVAMGSCVLNDWFDMDIDRVNKPDRPLVTGEVVPEHAVAIGTVLLLGALASAWAVHPAALQATIAASVVLTSAYTPVLKPIPVVKNLVVAGVVAAAIASGGLASGTGIAAT--LSPSLL-TFFTIAYREILMDVSDVEGDRAAGVRTIPVLLGRESAMAIASA 916
            +F  +WD         + R HN+  S  LVA GA A S  +A +  P V L A  +  +A+ SCV+ND+FD+ +D  N PD+PL +G +  + A+ + + L  G L  A  + P  L++ +A S   T  YTP+ K +  VKN  VA V+A A  +G LA+G G A    L P++L  F  I YREILMDV+D EGD A G++T+PV+LG  +A+A A+A
Sbjct:   63 SFPDHWDSRKAGALLRLARIHNLAPSTLLVAVGACAGSGSLAALRSPVVWLMALLSGGIAVSSCVVNDYFDLRVDLRNAPDKPLASGAITTDAALLLSSALYCGVLIVACFMEPTQLRSIVALSAAATLLYTPIFKRLTAVKNATVAAVIALAPLAGALAAGAGEAGARRLLPAVLWAFGGILYREILMDVTDAEGDAANGIKTLPVVLGPRAALAAATA 282
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BLAST of mRNA_F-serratus_M_contig1247.1869.1 vs. uniprot
Match: L1JHR6_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JHR6_GUITC)

HSP 1 Score: 133 bits (335), Expect = 2.140e-32
Identity = 92/211 (43.60%), Postives = 128/211 (60.66%), Query Frame = 2 
Query:  314 MLRPHNVPASFGLVAAGALAASHRIATILDPKVLLTAWAAASVAMGSCVLNDWFDMDIDRVNKPDRPLVTGEVVPEHAV-AIGTVLLLGALASAWAVHPAALQATIAASVVLTSAYTPVLKPIPVVKNLVVAGVVAAAIASGGLASG-TGIAATLSPSLLTFFTIAYREILMDVSDVEGDRAAGVRTIPVLLGRESAMAIASALLTAGVVA 940
            M RP N+PA  GL  AG+L AS  +A + DP V L A  +ASV +GS ++ND+FD           P+  G V PE A+ A  +  L+    +   +    L+A ++ S++LT  YTP+LK +  +KNLVVA V+A AI  GGLA G   + +TL PSL  F  I ++E+LMD+ DV GD  AG+RTIPV+LG + A  +A  LL+AG+ A
Sbjct:    2 MTRPQNIPAELGLSLAGSLFASRSLACLADPLVWLVALFSASVGVGSMLINDYFDYRSGADAYKSNPMAEGTVHPEQALLAASSWYLMSFFFACILLESFQLRALVSVSLLLTFLYTPLLKGVLFLKNLVVAFVIAQAIVLGGLAVGDVRMQSTLLPSLYMFCLILWQEVLMDIRDVRGDAEAGIRTIPVVLGCKFAALLA--LLSAGLAA 210
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BLAST of mRNA_F-serratus_M_contig1247.1869.1 vs. uniprot
Match: A0A0D2MBQ7_9CHLO (Digeranylgeranylglyceryl phosphate synthase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MBQ7_9CHLO)

HSP 1 Score: 130 bits (327), Expect = 2.670e-30
Identity = 81/208 (38.94%), Postives = 124/208 (59.62%), Query Frame = 2 
Query:  302 AYWDMLRPHNVPASFGLVAAGALAASHR-IATILDPKVLLTAWAAASVAMGSCVLNDWFDMDIDRVNKPDRPLVTGEVVPEHAVAIGTVLLLGALASAWAVHPAALQATIAASVVLTSAYTPVLKPIPVVKNLVVAGVVAAAIASGGLASGTGIAAT---LSPSLLTFFTIAYREILMDVSDVEGDRAAGVRTIPVLLGRESAMAIAS 913
            A   + R HN+  SF LV  GA A S R +A +  P V L +  +  +A+ SCV ND+FD+ +DR N P +PL +G +  + A+ + + +    L +A  + P+ L++ IA S   T  YTPV K +  +KN  VA V+A A   G LA+G G A     L  +L  F  + +REI+MD++D+EGDRAAG++T+PV++G+  A+  A+
Sbjct:   16 ALVQLARVHNLLPSFLLVMVGAWAGSGRDLAALRAPGVWLMSLLSGGIAVSSCVFNDYFDVQVDRANAPHKPLASGVLPLDIALLLSSSVYCAVLITACFMEPSQLRSIIALSAGATLLYTPVFKKLTAIKNATVAVVIALAPLGGALAAGAGEAGVMRLLPATLFAFSGVMFREIVMDLTDLEGDRAAGIKTLPVMIGQRGALLAAT 223
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BLAST of mRNA_F-serratus_M_contig1247.1869.1 vs. uniprot
Match: W7TY68_9STRA (Prenyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TY68_9STRA)

HSP 1 Score: 122 bits (306), Expect = 3.560e-26
Identity = 102/316 (32.28%), Postives = 150/316 (47.47%), Query Frame = 2 
Query:  158 LPARKTWRELWTTTPMLDNDEGTVQSIQPD--CNDEDRGSTPKNKTP-----NFAAYWDMLRPHNVPASFGLVAAGALAASHRIATILDPKVLLTAWAAASVAMGSCVLNDWFDMDIDRVNKPDRPLVTGEVVPEHAVAIG-----TVLLLGALASAWAVHPA---------------------------------------ALQATIAASVVLTSAYTPVLKPIPVVKNLVVAGVVAAAIASGGLASGT-----GIAATLSPSLLTFFT-----IAYREILMDVSDVEGDRAAGVRTIPVLLGRESAMAIASALL 922
            +P+    R    T+P  D    T  SI+P      + +G    NK        +  Y ++LRP NV  S  LV  GA   +  +  +L P V   A  +A VA+GSCVLND+FD  +DR+N P+R LV G++ P +A+ +      T LLLG +  +  +H A                                        L+  +  +V     YTPV KP P +KN VVA V+AA++A GGLA+ T      + ++L PSLL         I +REILMD+ D+ GD A G+ T+P LLG+  ++++   L+
Sbjct:   60 IPSSDFTRRSIRTSPTYDTVAHTNPSIRPSPISPPKAQGMISSNKHTLKSHHPWHPYIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIYALLLALSCLTTALLLGNIDLSCTIHRAFASVPVAGQPSTSYLSPPPMRWATARTLTPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLPPSLLAAVITVSCHIFHREILMDIDDIAGDHAGGILTLPRLLGKPLSLSLGGVLV 375
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BLAST of mRNA_F-serratus_M_contig1247.1869.1 vs. uniprot
Match: A0A4D9D7Q9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7Q9_9STRA)

HSP 1 Score: 120 bits (301), Expect = 4.480e-26
Identity = 90/260 (34.62%), Postives = 130/260 (50.00%), Query Frame = 2 
Query:  305 YWDMLRPHNVPASFGLVAAGALAASHRIATILDPKVLLTAWAAASVAMGSCVLNDWFDMDIDRVNKPDRPLVTGEVVPEHAVAIG-----TVLLLGALASAWAVHPA---------------------------------------ALQATIAASVVLTSAYTPVLKPIPVVKNLVVAGVVAAAIASGGLASGT-----GIAATLSPSLLTFFT-----IAYREILMDVSDVEGDRAAGVRTIPVLLGRESAMAIASALL 922
            Y ++LRP NV  S  LV  GA   +  +  +L P V   A  +A VA+GSCVLND+FD  +DR+N P+R LV G++ P HA+ +      T LLLG +  +   H A                                        L+  +  +V     YTPV KP P +KN VVA V+AA++A GGLA+ T      + ++L PSLL         I +REILMD+ D+ GD+A  + T+P LLG+  ++++   L+
Sbjct:   18 YIEVLRPQNVLPSAFLVLIGAWITTRDLRLVLSPLVAQMAITSALVAVGSCVLNDYFDRGVDRINHPERTLVQGQIRPIHALLLALSCLTTALLLGNIDLSCTTHRAFFPVPVAGQPSTSYLPPPPMRWATARTLAPHSYTESTRRLLRRIVQTAVAAVVLYTPVFKPFPFLKNGVVALVIAASVALGGLAAATTATLSSLPSSLRPSLLAAVITVSCHIFHREILMDIDDIAGDQAGSILTLPRLLGKPLSLSLGGVLV 277
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BLAST of mRNA_F-serratus_M_contig1247.1869.1 vs. uniprot
Match: A0A383WBC0_TETOB (Uncharacterized protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WBC0_TETOB)

HSP 1 Score: 120 bits (301), Expect = 9.440e-26
Identity = 70/164 (42.68%), Postives = 105/164 (64.02%), Query Frame = 2 
Query:  431 AASVAMGSCVLNDWFDMDIDRVNKPDRPLVTGEVVPEHAVAIGTVLLLGALASAWAVHPAALQATIAASVVLTSAYTPVLKPIPVVKNLVVAGVVAAAIASGGLASGTGIAATLS---PSLLTFFTIAYREILMDVSDVEGDRAAGVRTIPVLLGRESAMAIAS 913
            +  +A+ SCV+ND+FD+ ID  N PD+PL +G + P+ A+ + ++L  G L +A  + P+ L++ +A S   T  YTP+ K +  VKN  VA V+A A  +G LA+G G A  L     +L  F  + +REILMD++D EGDR AGV T+PVLLG+ +A+  A+
Sbjct:  161 SGGMAIASCVVNDYFDLKIDASNAPDKPLPSGAIAPDAALLLSSLLYCGCLIAACLMEPSRLRSIVAFSAAATLLYTPLFKRLTGVKNATVATVIALAPLAGALAAGAGDAGLLRLLPATLFAFSGVMFREILMDLNDAEGDRQAGVWTLPVLLGKPAALLCAA 324
[Close]
BLAST of mRNA_F-serratus_M_contig1247.1869.1 vs. uniprot
Match: A0A830H3H2_9CHLO (Uncharacterized protein n=3 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H3H2_9CHLO)

HSP 1 Score: 110 bits (275), Expect = 1.830e-22
Identity = 93/270 (34.44%), Postives = 142/270 (52.59%), Query Frame = 2 
Query:  293 NFAAYWDMLRPHNVPASFGLVAAGALAASHRIATILDPKVLLTAWAAASVAMGSCVLNDWFDM--DIDRVNKPDRPLVTGEVVPEHAVAIGTVLLLGALASAWAVHPAALQATIAASVVLTSAYTPVLKPIPVVKNLVVAGVVAAAIASGGLASGTGIAATLS--PSLLTFFTIAYREILMDVSDVEGDRAAGVRTIPVLLGRESAMAIASALLTAGVVAGGAGILTAGATSPS-----------RYAAAGLSALFAAPSYANVLLVVRS 1057
            NF     ++R HN   S  +   G ++ S  I  +  P +L+    ++ VA+ SC+LN +FD    +D+    + PL +G+V PE A+ +  V+ L    +   + P  L+  +AAS ++T  YTP+LKP   +KN+ VA V++AA  +G LA+  G  A ++  P +  F  +  REI+MD++DVE D  A VRTIPV  G  +A  I  A L +        IL AGA+  +           R+AA G+ AL AA S  + L + RS
Sbjct:  108 NFEPMIPLMRIHNYLPSALIALVGGMS-SQGIHALAHPTLLVVIALSSLVALASCLLNSYFDFAAGVDQ----EGPLPSGKVSPEKALFLSFVMYLACFTAIAFLDPPPLRHVVAASALITVVYTPLLKPATAIKNVSVAFVISAAAVAGSLAATAGNWAAVAKLPPIFLFLCVVAREIVMDITDVEEDADANVRTIPVRFGTHNAARIVEAFLLSAAC-----ILVAGASLAAPHVLASQGLVGRFAAMGVGAL-AAHSIGSALTMARS 366
[Close]
BLAST of mRNA_F-serratus_M_contig1247.1869.1 vs. uniprot
Match: A0A6C0HC55_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HC55_9ZZZZ)

HSP 1 Score: 108 bits (269), Expect = 4.380e-22
Identity = 75/249 (30.12%), Postives = 126/249 (50.60%), Query Frame = 2 
Query:  200 PMLDNDEGTVQSIQPDCNDEDRGSTPKNKTPNFAAYWDMLRPHNV-PASFGLVAAGALAASHRIATILDPKVLLTAWAAASVAMGSCVLNDWFDMDIDRVNKPDRPLVTGEVVPEHAVAIGTVLLLGALASAWAVHPAALQATIAASVVLTSAYTPVLKPIPVVKNLVVAGVVAAAIASGGLASGTGIAATLSP--------SLLTFFTIAYREILMDVSDVEGDRAAGVRTIPVLLGRESAMAIASAL 919
            P +     T++    D N+    + P       +A++ ++RP N+ P +      G +   H    +  P  ++  +    +   S +LND FD+ +D++N P RPL+TGEV  E A+A+ ++LL       +   P+ LQ  I  ++     YTP+LK IP +KNL  AG+VA ++   GL +   I    +         S L FF   Y EIL+D+ D++GD+  G+ T+PV+ G+  A  IA+++
Sbjct:   25 PKVTTKISTIKYDNQDNNNIIDSAKPFTPLQKVSAFFKLIRPSNILPTTLLTFTGGWIVNPHLFELLNTPSFIVGIFDTLLIMSTSMILNDLFDIPLDKINNPRRPLITGEVKVEEAIALSSILLGLTEYLNFMYLPSNLQIVIHTAIANILIYTPILKKIPFIKNLSCAGLVAFSVFFAGLTANPIIDYGFNKNWGLLAINSQLIFFGSLYTEILLDMCDIDGDKQNGILTLPVIYGKNMAFEIANSI 273
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1247.1869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LBF2_9PHAE4.340e-11667.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD89_ECTSI4.890e-8964.35Prenyltransferase, UbiA family, Putative 4-hydroxy... [more]
A0A2V0P9S4_9CHLO3.830e-3440.91Geranylgeranylglycerol-phosphate geranylgeranyltra... [more]
L1JHR6_GUITC2.140e-3243.60Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A0D2MBQ7_9CHLO2.670e-3038.94Digeranylgeranylglyceryl phosphate synthase n=1 Ta... [more]
W7TY68_9STRA3.560e-2632.28Prenyltransferase n=1 Tax=Nannochloropsis gaditana... [more]
A0A4D9D7Q9_9STRA4.480e-2634.62Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A383WBC0_TETOB9.440e-2642.68Uncharacterized protein n=2 Tax=Tetradesmus obliqu... [more]
A0A830H3H2_9CHLO1.830e-2234.44Uncharacterized protein n=3 Tax=Pycnococcus provas... [more]
A0A6C0HC55_9ZZZZ4.380e-2230.12Uncharacterized protein n=1 Tax=viral metagenome T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1247contigF-serratus_M_contig1247:103605..110015 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score284.6
Seed ortholog evalue5.5e-74
Seed eggNOG ortholog2880.D8LD89
Hectar predicted targeting categoryother localisation
EggNOG free text desc.UbiA prenyltransferase family
EggNOG OGs2CYY1@1,2S75T@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1695
Cds size948
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1247.1869.1prot_F-serratus_M_contig1247.1869.1Fucus serratus malepolypeptideF-serratus_M_contig1247 104150..109813 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929172.3533254-UTR-F-serratus_M_contig1247:103604..1041491622929172.3533254-UTR-F-serratus_M_contig1247:103604..104149Fucus serratus maleUTRF-serratus_M_contig1247 103605..104149 -
1690962735.5570269-UTR-F-serratus_M_contig1247:103604..1041491690962735.5570269-UTR-F-serratus_M_contig1247:103604..104149Fucus serratus maleUTRF-serratus_M_contig1247 103605..104149 -
1622929172.4293497-UTR-F-serratus_M_contig1247:109813..1100151622929172.4293497-UTR-F-serratus_M_contig1247:109813..110015Fucus serratus maleUTRF-serratus_M_contig1247 109814..110015 -
1690962735.6214178-UTR-F-serratus_M_contig1247:109813..1100151690962735.6214178-UTR-F-serratus_M_contig1247:109813..110015Fucus serratus maleUTRF-serratus_M_contig1247 109814..110015 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929172.3629715-CDS-F-serratus_M_contig1247:104149..1043371622929172.3629715-CDS-F-serratus_M_contig1247:104149..104337Fucus serratus maleCDSF-serratus_M_contig1247 104150..104337 -
1690962735.5690167-CDS-F-serratus_M_contig1247:104149..1043371690962735.5690167-CDS-F-serratus_M_contig1247:104149..104337Fucus serratus maleCDSF-serratus_M_contig1247 104150..104337 -
1622929172.373714-CDS-F-serratus_M_contig1247:105060..1052191622929172.373714-CDS-F-serratus_M_contig1247:105060..105219Fucus serratus maleCDSF-serratus_M_contig1247 105061..105219 -
1690962735.5785358-CDS-F-serratus_M_contig1247:105060..1052191690962735.5785358-CDS-F-serratus_M_contig1247:105060..105219Fucus serratus maleCDSF-serratus_M_contig1247 105061..105219 -
1622929172.3827784-CDS-F-serratus_M_contig1247:106148..1063321622929172.3827784-CDS-F-serratus_M_contig1247:106148..106332Fucus serratus maleCDSF-serratus_M_contig1247 106149..106332 -
1690962735.5880294-CDS-F-serratus_M_contig1247:106148..1063321690962735.5880294-CDS-F-serratus_M_contig1247:106148..106332Fucus serratus maleCDSF-serratus_M_contig1247 106149..106332 -
1622929172.391805-CDS-F-serratus_M_contig1247:106815..1069321622929172.391805-CDS-F-serratus_M_contig1247:106815..106932Fucus serratus maleCDSF-serratus_M_contig1247 106816..106932 -
1690962735.5989778-CDS-F-serratus_M_contig1247:106815..1069321690962735.5989778-CDS-F-serratus_M_contig1247:106815..106932Fucus serratus maleCDSF-serratus_M_contig1247 106816..106932 -
1622929172.4038172-CDS-F-serratus_M_contig1247:107362..1074551622929172.4038172-CDS-F-serratus_M_contig1247:107362..107455Fucus serratus maleCDSF-serratus_M_contig1247 107363..107455 -
1690962735.607067-CDS-F-serratus_M_contig1247:107362..1074551690962735.607067-CDS-F-serratus_M_contig1247:107362..107455Fucus serratus maleCDSF-serratus_M_contig1247 107363..107455 -
1622929172.4187577-CDS-F-serratus_M_contig1247:109606..1098131622929172.4187577-CDS-F-serratus_M_contig1247:109606..109813Fucus serratus maleCDSF-serratus_M_contig1247 109607..109813 -
1690962735.6139414-CDS-F-serratus_M_contig1247:109606..1098131690962735.6139414-CDS-F-serratus_M_contig1247:109606..109813Fucus serratus maleCDSF-serratus_M_contig1247 109607..109813 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1247.1869.1

>prot_F-serratus_M_contig1247.1869.1 ID=prot_F-serratus_M_contig1247.1869.1|Name=mRNA_F-serratus_M_contig1247.1869.1|organism=Fucus serratus male|type=polypeptide|length=316bp
MLDNDEGTVQSIQPDCNDEDRGSTPKNKTPNFAAYWDMLRPHNVPASFGL
VAAGALAASHRIATILDPKVLLTAWAAASVAMGSCVLNDWFDMDIDRVNK
PDRPLVTGEVVPEHAVAIGTVLLLGALASAWAVHPAALQATIAASVVLTS
AYTPVLKPIPVVKNLVVAGVVAAAIASGGLASGTGIAATLSPSLLTFFTI
AYREILMDVSDVEGDRAAGVRTIPVLLGRESAMAIASALLTAGVVAGGAG
ILTAGATSPSRYAAAGLSALFAAPSYANVLLVVRSGFSQQRLSSAVDQAL
GPLALTLGLMGIALR*
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mRNA from alignment at F-serratus_M_contig1247:103605..110015-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1247.1869.1 ID=mRNA_F-serratus_M_contig1247.1869.1|Name=mRNA_F-serratus_M_contig1247.1869.1|organism=Fucus serratus male|type=mRNA|length=6411bp|location=Sequence derived from alignment at F-serratus_M_contig1247:103605..110015- (Fucus serratus male)
TTCTCCGCTACAGAACCGACGGGTCTGTCGATGCTCGCCCAACCGCACCC
GCCCCCCGAGTCACCGGAGGGAATATATATATCGACTAGCTTCTATCGGA
GGTAGGGAAAAACGAATCAACGGTCGCAGACGCATTGGTGTTGGCACTGG
CCTCGGACTGCCCGCGAGGAAGACCTGGAGGGAGCTTTGGACGACCACCC
CGATGCTTGATAATGACGAGGGAACTGTCCAAAGTATACAGCCAGATTGT
AATGATGAAGATCGAGGTTCGACCCCCAAAAACAAGACTCCGAATTTCGC
CGCATACTGGGACATGTTGAGGCCCCACAACGTCCCGGCCTCTTTCGGTC
TTGTAGCGGCGGGGGCTCTCGCCGCCTCGCACAGGATCGCTACCATCCTC
GATCCGAAGGTATTGTCTGTGGTAATTGCGTAGAGAGATTGAGGCGGGAG
GAGGGGGGGGGGAAAGAAAAAGTTCAAATTAATTTACCCCCGCTCATCAC
GATGGCTCTGTTTTGGTAATGTTCCTTCTTGGCGATTAAAAGCGTCAAAG
TACTTCTTTAAACAACTGTAGTATAATAGTGGGTTTCTTCCCGATATTAT
ACTGTTAACCCTATGCTACACTACCATCGGGGAACCCGACTAAATCCCAT
GATGAAGGGAGATTTATCTTTGCAAGCCAATGTTCCCTCCTAAAACGTTT
TAAAAAATAAAATTTTAAATTTTGCCCCCTGACAGGGTGGATGGGATTGT
CGATATTCAGATCAGATTTTTCTCTCACAGATTTACTAAAAGTACCTAAT
AATTGTATTTAGTAGTTGTACTTGAATAATATCACCAGTACAGAATAGTT
GTAATAATAATTGTGCTTGTACTATTAATAATACTATTAATACACAGTCG
TTCTATTACTATATTACAACATGTTTTATGTAGCAAACTATTCTATTTTT
TTATATTAGTTTCGTCAGACTGTCAGAAGTGCGCTGCCAGTCTTTGTGGT
CTCTTTTTCCAGTTCAGCAGACCACAAGCGGGACTAGATAGCCACCGTGT
ACAGCAGTAGTTTTGTCGGGCTGGTAACCAAAACGCTGAATATGAAAAAC
AACAAAGCCTATGGTATGCGATCTCTCACCTGAACGTTTTGACATTTTTT
ACCCCTGACTGGGGGATGATGATGCTCAGAAGGTCTAGATGCATTCAGAT
ATATATTTTAAACAGCAGACCACAAGCGGGACTGTGGCCATCGTGTGCAG
CAGTATGCGGAACTCGGGAGGAAACCCGTAAGTACGCACCAAATTCAGCC
TGAGTATGGAGATGGGCAGGCTGACGCGGGACGGGACGGCTGAACCCGTC
TCGCGAGACCAAATTCTCAGGCGCGCACGGGGACAGGGGAATATTCATTT
TCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACACGATTGATC
CATACTCTGCTATATGTGATGACCATATAATAGTTTTTTCGGGTTGGCAA
CCAATACGCTGAATGCGAGCAATAGCAGTTTAATTATTCAATAACCTTAA
TCTTCCCATTTCACAGCCAATGTATGGTCATCACTTACAGCAAAGTATGG
TTGCCAATCCTACTCGTGGTCAGATGAACAGGGAAAATGAATACAAAATT
TCCCTGTCCCCGTTCGCGCCTGAGAATTTAGTCTCGCGAGATGGGTTCGA
CCGTCCCGTCCCGCGTCAGGCTGAATCTAGTGCTTGCTCACGGGATTCCT
CCCACTTTCCGCCCGTTCATTTATTTTTACCGCCAACCACCATCGGGTCA
GTCCCTCCCTATTAATCTATATATTATATTATATTATATTAGAGTTTATC
AGGTCGCGCAAATTGCGTATCGATGGCGTTTACTGCCAAGAGTCCGCCGG
GACAGGGCCAGTAGTCTTCGAGGTAGTTCCAGAAACGGGTGCTGCGTTTT
CAGGTATCTTCATAGGGACATATTTAATTTTTGCATTTATTTTCCCATAC
CCACTAAATAACAGTGGTTTTCTCCCCGATATTGCATTGCCTCCGATACT
TCCTGTATCATACATGCAATGGAGGCGTTTCATGCAATGGAGGCGTTTCG
CGAGAGGAAACGTCCAAGCCATAGTAATAGTATTATTTATATCATATGCT
GTCTACGTACCTATCATTGTATATTTATTTATTTCAAAGCTCACGCCACA
GACTGCATGTAGTCAAGAAGCATGTCCGTTCTCGAAAGAACAGAGTAATC
CGCGATGGTGAGCAGTCAAACTTTTTTTTAACTGTCGCTTGTGAAACCCG
CCCCACTCATGCCACCATACCCGATATCAACAGCTGTTGACCGAGACTCA
TGACTGCCGAGAACGCTGTCCAATCAGAACCACAGTATCCCAGACACCGC
TCGCCGTTGATCTGATGGTGATACTTCGTTTCTGCTACCTCTCGCGCCCA
GCGCCGATGGTAAGGCTTCACTTTTACTGCCCGATACATCATCCAAAATT
GAGCGGCGTTCCCTTTCCCCGGTCTATTGGTGGGCCACCTCCATGCTTTA
AAAAATAAAGGTTTTGCTGACAGCCTGGGCGGCGGCCTCTGTCGCCATGG
GTTCCTGCGTCCTGAACGACTGGTTCGACATGGACATCGATCGCGTCAAC
AAGGTTTGGCAGGGCTGTCGGTCGATCCGCTCAGACAGCGTGGGAAGGGG
TAGGACGTGTCCACTCGTTCTGAAATCCCTCTTTCCCACCGCTGTATGGA
CTCCTTCTTTGTTTCTAAAAATTCATCACTGCAGCTATCCAGCCGCGCCC
TTTCTGTGCAGCTATTAACAATTTATCTTAAATAGAGCGCGCTATTAATA
TTTATAGGAGACGAAGATGTGTTACTAATATATAATTAGCATAGGACCTT
TTTGGCCTCCTCGCCCTTTCACTCCCTGAGGTCTCTTGCTGGCGTGTGGA
AATATACTCGTAGGTTTGTAGAGATAATGAGGCGTTCCTCCCCTCCTCTC
CCATTTCCCCTCCTTTCTATCTCACCCTATCATGTCAACTACTCCCGCCA
CTTGCCTTCGCTGCTTTTGGTGTGCCGCGTCAGCCTGACCGGCCGCTCGT
GACGGGAGAGGTCGTGCCGGAGCACGCTGTGGCTATCGGAACAGTGCTTT
TGCTGGGGGCGTTGGCGAGCGCGTGGGCGGTGCACCCGGCGGCGTTGCAG
GTGTGGTGACGGCGTAGGAAATGGTCACGACGTGGCTACCCCCGCCCGGC
AGGGGCGGCGGCGTGGCGCCTTCTTTATTTTCACGCGTGGTCAGCCTAGG
ATGTGCCGTCCAGTTGCAGCGCTTAATCGTATTCAGTAAACGAGCCACAA
AGCAGAGAGGAATCGTTTTTAGCCAATCGGGGAAGTGCGATCCTTTTCCC
TCCCCACCCCCATATTTTCTTGGCCCATTTTGTGACGTAGCGCGCGCTGT
GGCCTCTAGGGAAGAAGGGGTGGATCCATCCCCCACCTCTCACCCCCCCA
GGCTACGGCAGCGAATTGACTCGATTGGGCGCGAGTGCTTAAGATCAATC
GGAGTGCATGTTTCTGTTTTTCCCGTATGTGTGGCGCGGCGCGCGTATGG
TGGGTCATACGTGGTTAGACCCTGAAGATGGCGCGTGAAACATTTCGCCG
AACGTGCGCGACCCTTTTTTCCTTGTCGTCAAGGCGACGATCGCCGCTTC
GGTGGTGCTGACGTCCGCTTACACGCCCGTCCTGAAGCCGATTCCGGTGG
TTAAGAACCTGGTCGTTGCCGGGGTTGTCGCTGCTGCAATCGCCTCAGGG
GGGCTCGCTTCTGGGACGGGGATCGCCGCGACGCTCTCCCCTTCCCTGCT
CACGTTTTTCACCATCGGTGAGCATTGCATTGTGCAGTGCTACTTGGAGG
GGGGGGGGGGCGGCTGGCCACGGAGGACGAAAAATCACCGTAACCGCATC
TCGGAGAAGAGCAACACGCCGTGGCGTGATGGAGGGGCAGATGAATCATG
TCCTTATTTTTGTCATAAACTCCTTCTCCTCCTCTACCTCTACACCCCCC
CCCCTCCCCCTGACAATTCTTCGATGGATAGTATTTGCTCGATCCCCTTC
CGCTATTTTAGCAATTATATCCTTGTTTTTTGTCATTCCTTTTTTTCTTC
CCGCACTCGTCAATGGATATGCTTTCCTCGACCCCCTCCCACTTGTTGGC
GGAATTATACTCTTGTTTTGTCATAACCTTTCTCCCCTCTCTCCTCGATG
GATTCGTCTCTCACTATTTTTTTTAACAAGACTCTTTTTGTTTTTCCTGG
TAACGTATTTGGTCATAGGCCATATTCACCCCCAAATCCTTCTCCATGGA
TTTATACCTATATTATATGGTACTTATCTTTCCTGCCCCCGCCCTCCCAC
CATGTTTTTCATGAAAAAGAAGAAGAAAAACGATAATATTTTCACTCTCC
CAATTTATTTCTCGTTACTACACTGCTCTAGTCAACGAGCGCACTAAGCA
CAACTATAGTTGACCGTTCCTTCTTACATACTATGTGTACCGGTTCTAAG
TACTACTTTAGGATCACCACGAGAGGGTTTGGATTGGTTTAAAAGTAATA
GGTCAAAGGCGTTGTAATGTTAAAATCTAAAATTAAGTAAACTAGATCGT
TTAAGAAAATACGCTTCTTTTTTTAAGACAATTTAACATGCTAAAATTAT
ATTTCTTCTCAAGAGTCCGCCTCTCCCTTTCAAATCCCGACTTTCTCGCG
TACGCATCTTCTGATGGCACTCCGCATGGCGCGCCCGCCCGGAAAGCGTA
TCGCGAGATTCTGATGGACGTCTCCGATGTCGAGGGAGACCGGGCTGCAG
GCGTTCGCACCATTCCCGTGTTGTTGGGCCGAGAATCCGCGATGGCGATC
GCGTCCGCGCTGCTCACCGCGGGAGTTGTTGCCGGCGGCGCAGGCATTCT
TACGGGTGGGTGCTGCCACTCAAAAACCCACTCTATTATCTACTAGTATA
CTGTATATACGTGGGAGCTACGGTAGAAGCAGTGGGTGCAGTACGATACC
GCTCTATGGCTATTGCACCTGTACCACGTCGGTGCATACTGGTACTGTAC
GTATTAGTAGTTGGAGTTCGGGTTTGTTGTAAGAGTCTGGACTCGCGTGC
ATGCCTTAAGGCACGTGAGGATTCTAGATGACGAGTTATTCAAGGCATCA
CTGAAATACTGGTGTCACGCTCATTGCATGTACTCTATACTCTATTCTGT
ATTAATTGTGTATGGTACTGTACGAAAGGGCACAGTTACTATTATTAGAA
TAGTACAGCAGTGAGTGCAAGTACATAAGAGCTATACGATCTATTCCTGC
ATAAAGGAGAACTACGCCTCCGTCACCGATACCGTTATACCAAACGGGGC
GTGGGCGTGTTGAGGACCCCCCCCCCCCCCCTTCGTATCCAGTAGAATTA
CACACCCCTGGTGTCACTATGATGTATATATATGACGCGATCGTTGTCGC
TATTGTAAGAGTTTCGGGCTTTGATTAATCGCAGCAGTTAAAAAATAGCG
AAACCAAACCAGGCGAAAATTAGGATTTAATTTGGTTTATACTGGTTGTC
AAGTATATTGACGGAACCGCCCAACTGCCGCCGAAAATGCGACGCCTAAC
ATACCCTGCACCTTTATTTCGGACGCAGCGGGCGCTACGAGCCCCTCGAG
GTACGCTGCGGCGGGACTGTCAGCGCTGTTCGCCGCACCTTCGTACGCCA
ATGTCCTCCTTGTAGTGCGATCGGGTTTCTCACAGCAAAGGCTTTCCTCT
GCCGTGGACCAGGCCTTGGGACCGCTCGCGCTCACCCTAGGCCTGATGGG
CATCGCGCTGCGGTAGGTAGCGTCTCGTTGGTGCGATAACGTCATCGATG
CTGCTAGACTCCGTCGCCGCCGCGCAGCAGCAGCAGCAGCACAGATCGCT
TTCCTCTATTTCCCCTTGCTGCTGTGAGGACTACCGCAGAAAGAGGGGGG
AGGGGGAGGGATGAAGAACGCCCGGACGTCCAGACAGGAACAGCAGCCGT
CGATGGGTTTCTCGCTCACGGTATTGCATGGGGTTGAGTCGAGGAGTCCG
TGATGACCGGTGCTGTATCGGGACCCTTGCGGCACGAAGCTTTGCGCCGC
GGATCCCTATGTCATTGCGAAAGCGTGGAGGAACAAGGAATGCGGATGCT
ATGCATGACGAGAGGAAGTTGGGTATTTTTAAATGAGGCGTTTATCGAGC
CAGGGATGGTTTCCGGGAAGGAGGAGGGCGACGCGGATCTCTAGAGCAGC
CCGGAGGTGGCAGGAGGCTTGAGAGAGTGTAAAGAGAAAAGAAGGGGAGA
TGAAAGCCGTAAGGATTAGGTTGTTCGCGGTTTTTGAGGAGAACGCTGTT
CCCTGTGCTAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1247:103605..110015-

>mRNA_F-serratus_M_contig1247.1869.1 ID=mRNA_F-serratus_M_contig1247.1869.1|Name=mRNA_F-serratus_M_contig1247.1869.1|organism=Fucus serratus male|type=CDS|length=1896bp|location=Sequence derived from alignment at F-serratus_M_contig1247:103605..110015- (Fucus serratus male)
ATGCTTGATAATGACGAGGGAACTGTCCAAAGTATACAGCCAGATTGTAA
TGATGAAGATCGAGGTTCGACCCCCAAAAACAAGACTCCGAATTTCGCCG
CATACTGGGACATGTTGAGGCCCCACAACGTCCCGGCCTCTTTCGGTCTT
GTAGCGGCGGGGGCTCTCGCCGCCTCGCACAGGATCGCTACCATCCTCGA
TCCGAAGATGCTTGATAATGACGAGGGAACTGTCCAAAGTATACAGCCAG
ATTGTAATGATGAAGATCGAGGTTCGACCCCCAAAAACAAGACTCCGAAT
TTCGCCGCATACTGGGACATGTTGAGGCCCCACAACGTCCCGGCCTCTTT
CGGTCTTGTAGCGGCGGGGGCTCTCGCCGCCTCGCACAGGATCGCTACCA
TCCTCGATCCGAAGGTTTTGCTGACAGCCTGGGCGGCGGCCTCTGTCGCC
ATGGGTTCCTGCGTCCTGAACGACTGGTTCGACATGGACATCGATCGCGT
CAACAAGGTTTTGCTGACAGCCTGGGCGGCGGCCTCTGTCGCCATGGGTT
CCTGCGTCCTGAACGACTGGTTCGACATGGACATCGATCGCGTCAACAAG
CCTGACCGGCCGCTCGTGACGGGAGAGGTCGTGCCGGAGCACGCTGTGGC
TATCGGAACAGTGCTTTTGCTGGGGGCGTTGGCGAGCGCGTGGGCGGTGC
ACCCGGCGGCGTTGCAGCCTGACCGGCCGCTCGTGACGGGAGAGGTCGTG
CCGGAGCACGCTGTGGCTATCGGAACAGTGCTTTTGCTGGGGGCGTTGGC
GAGCGCGTGGGCGGTGCACCCGGCGGCGTTGCAGGCGACGATCGCCGCTT
CGGTGGTGCTGACGTCCGCTTACACGCCCGTCCTGAAGCCGATTCCGGTG
GTTAAGAACCTGGTCGTTGCCGGGGTTGTCGCTGCTGCAATCGCCTCAGG
GGGGCTCGCTTCTGGGACGGGGATCGCCGCGACGCTCTCCCCTTCCCTGC
TCACGTTTTTCACCATCGGCGACGATCGCCGCTTCGGTGGTGCTGACGTC
CGCTTACACGCCCGTCCTGAAGCCGATTCCGGTGGTTAAGAACCTGGTCG
TTGCCGGGGTTGTCGCTGCTGCAATCGCCTCAGGGGGGCTCGCTTCTGGG
ACGGGGATCGCCGCGACGCTCTCCCCTTCCCTGCTCACGTTTTTCACCAT
CGCGTATCGCGAGATTCTGATGGACGTCTCCGATGTCGAGGGAGACCGGG
CTGCAGGCGTTCGCACCATTCCCGTGTTGTTGGGCCGAGAATCCGCGATG
GCGATCGCGTCCGCGCTGCTCACCGCGGGAGTTGTTGCCGGCGGCGCAGG
CATTCTTACGGCGTATCGCGAGATTCTGATGGACGTCTCCGATGTCGAGG
GAGACCGGGCTGCAGGCGTTCGCACCATTCCCGTGTTGTTGGGCCGAGAA
TCCGCGATGGCGATCGCGTCCGCGCTGCTCACCGCGGGAGTTGTTGCCGG
CGGCGCAGGCATTCTTACGGCGGGCGCTACGAGCCCCTCGAGGTACGCTG
CGGCGGGACTGTCAGCGCTGTTCGCCGCACCTTCGTACGCCAATGTCCTC
CTTGTAGTGCGATCGGGTTTCTCACAGCAAAGGCTTTCCTCTGCCGTGGA
CCAGGCCTTGGGACCGCTCGCGCTCACCCTAGGCCTGATGGGCATCGCGC
TGCGGTAGCGGGCGCTACGAGCCCCTCGAGGTACGCTGCGGCGGGACTGT
CAGCGCTGTTCGCCGCACCTTCGTACGCCAATGTCCTCCTTGTAGTGCGA
TCGGGTTTCTCACAGCAAAGGCTTTCCTCTGCCGTGGACCAGGCCTTGGG
ACCGCTCGCGCTCACCCTAGGCCTGATGGGCATCGCGCTGCGGTAG
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