mRNA_F-serratus_M_contig743.18688.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig743.18688.1 vs. uniprot
Match: A0A6H5K953_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K953_9PHAE) HSP 1 Score: 197 bits (500), Expect = 6.560e-55 Identity = 97/200 (48.50%), Postives = 118/200 (59.00%), Query Frame = 1
Query: 1 LKSLDGALRGGLDSPRDPDEGARPTMTMARGTFHGSAKWNARML---DVSVEGQRGITSRTDGELEWEACLAESGIVPHVETVLESAKRWYGCDRTPNNRTSCEDSRCPICWEGS--GLNNNDIRCLRFKHGVPPRASSGLGRFKGGDVRSATCTGTTPRDWAVGDGSGEDVEIFTSRRAHAAGLSVDGGVTLAKILYFF 585
L +L LRGGL+ D D PT +M G + GSAKW A +L D++ G + + WE C++E + PH +L + W+ C R+ C D+RCP+CWEG L +I C RFKHGVPP+ SSGLGRFKGGDV+ AT TG TPR W VGDG GE VEIFTS A LS DG VTL ILYFF
Sbjct: 661 LAALGDRLRGGLNGVVDADASTTPTASMKDGKYQGSAKWQATILGGGDLACSEDGGGSVAAGAKEPWEVCVSEGPVRPHAGAILRANAEWFSCGRSDGALDDCADARCPLCWEGGHESLKARNISCSRFKHGVPPKTSSGLGRFKGGDVKKATATGPTPRHWCVGDGRGESVEIFTSPEAKRKDLSGDGHVTLGLILYFF 860
BLAST of mRNA_F-serratus_M_contig743.18688.1 vs. uniprot
Match: A0A6H5K8R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R0_9PHAE) HSP 1 Score: 176 bits (446), Expect = 3.500e-50 Identity = 94/202 (46.53%), Postives = 125/202 (61.88%), Query Frame = 1
Query: 1 LKSLDGALRGGLDSPRDPDEGARPTMTMARGTFHGSAKWNARML--DVSVEGQRGITSRTDGELE-WEACLAES-GIVPHVETVLESAKRWYGCDRTPNNRTS-CEDSRCPICWEGSG--LNNNDIRCLRFKHGVPPRASSGLGRFKGGDVRSATCTGTTPRDWAVGDGSGEDVEIFTSRRAHAAGLSVDGGVTLAKILYFF 585
LK++ L+ G+ D G PT + GSA+W + +L + V + S G E WEAC+A + GI P E +L +A+ WYGC + ++ C + RCP CWEG G L+N++I C R KHGVP ++SSG+ FKGGDV++AT GT+PRDWAVG G G+DVEIFT+ +A LS DGGVTL KILYFF
Sbjct: 64 LKAVGSMLQVGMAHVEDATVGVVPTAAASTAQHQGSARWESSVLPDEPLVPNHSHLGSAGKGPKEPWEACMAGADGIRPRKERILAAARIWYGCGSGKGDLSAVCSELRCPCCWEGGGGKLDNSNISCSRIKHGVPAKSSSGMCYFKGGDVKAATNEGTSPRDWAVGAGGGQDVEIFTTPKAREDDLSGDGGVTLGKILYFF 265
BLAST of mRNA_F-serratus_M_contig743.18688.1 vs. uniprot
Match: A0A6H5JM61_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM61_9PHAE) HSP 1 Score: 178 bits (452), Expect = 9.020e-50 Identity = 96/201 (47.76%), Postives = 119/201 (59.20%), Query Frame = 1
Query: 1 LKSLDGALRGGLDSPRDPDEGARPTMTMARGTFHGSA---KWNARMLDVSVEGQRGITSRTDGELEWEACLAESGIVPHVETVLESAKRWYGCDRTPNN-RTSCEDSRCPICWEGSG--LNNNDIRCLRFKHGVPPRASSGLGRFKGGDVRSATCTGTTPRDWAVGDGSGEDVEIFTSRRAHAAGLSVDGGVTLAKILYFF 585
L++LD + GG+ + D EG +PT M G HGSA + A DV G T WEACL+E + P +L + WY C R+ + R C++ RC CWEG G L N+DI C R KHGVP + SSGLGRFKGGDV++AT G TPRDWAVG G G+ VEIFT+ +A LS DG VTLA IL+FF
Sbjct: 310 LQALDDSRSGGITNVVDGTEGTKPTAAMLAGQPHGSATSLRGGAAPNDVGT----GSTGGGGPREAWEACLSEGAVRPSAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDIICYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLASILHFF 506
BLAST of mRNA_F-serratus_M_contig743.18688.1 vs. uniprot
Match: D7FZ46_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ46_ECTSI) HSP 1 Score: 174 bits (442), Expect = 2.360e-47 Identity = 95/215 (44.19%), Postives = 123/215 (57.21%), Query Frame = 1
Query: 1 LKSLDGALRGGLDSPRDPDEGARPTMTMARGTFHGSAKWNARML--DVSVEGQRGITSRTD--------------GELE-WEACLAESGIVPHVETVLESAKRWYGCDRTPNN-RTSCEDSRCPICWEGSG--LNNNDIRCLRFKHGVPPRASSGLGRFKGGDVRSATCTGTTPRDWAVGDGSGEDVEIFTSRRAHAAGLSVDGGVTLAKILYFF 585
L++LD +L GG+ + D EG +PT M G HGSA W A +L D + R ++ + G E WEACL++ + P +L + WY C R+ + R C++ RC CWEG G L N++I C R KHGVP + SSGLGRFKGGDV++AT G TPRDW G G G+ VEIFT+ A LS DG VTL +ILYFF
Sbjct: 383 LQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAPNDVRAGSAGSGVAPXXXXXXXXXXGGPREAWEACLSKGAVRPSAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDEIICHRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWVAGSGQGDAVEIFTNPMAKRDDLSGDGHVTLGRILYFF 597
BLAST of mRNA_F-serratus_M_contig743.18688.1 vs. uniprot
Match: A0A6H5K7Z2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z2_9PHAE) HSP 1 Score: 163 bits (413), Expect = 2.370e-46 Identity = 89/187 (47.59%), Postives = 107/187 (57.22%), Query Frame = 1
Query: 82 MARGTFHGSAKWNARML-------DVSVEGQRG---------ITSRTDGELE-WEACLAESGIVPHVETVLESAKRWYGCDRTPNN-RTSCEDSRCPICWEGSG--LNNNDIRCLRFKHGVPPRASSGLGRFKGGDVRSATCTGTTPRDWAVGDGSGEDVEIFTSRRAHAAGLSVDGGVTLAKILYF 582
M G HGSA W A +L DV RG G E WEACL+E + P +L + WY C R+ + R C++ RC CWEG G L N+DI C R KHGVP + SSGLGRFKGGDV++AT G TPRDWAVG G G+ VEIFT+ +A LS DG VTL++ILYF
Sbjct: 1 MLAGQPHGSATWRATILRQDAAPDDVKAGSARGGXXXXXXXXXXXXXXGPREAWEACLSEDAVRPSAGAILNANTLWYACGRSDGDGRDVCKELRCSSCWEGGGKSLKNDDIICYRIKHGVPAKISSGLGRFKGGDVKAATAGGATPRDWAVGSGQGDAVEIFTNPKAKRDDLSGDGHVTLSRILYF 187
BLAST of mRNA_F-serratus_M_contig743.18688.1 vs. uniprot
Match: A0A6H5KMA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMA2_9PHAE) HSP 1 Score: 165 bits (417), Expect = 8.060e-46 Identity = 91/198 (45.96%), Postives = 110/198 (55.56%), Query Frame = 1
Query: 1 LKSLDGALRGGLDSPRDPDEGARPTMTMARGTFHGSAKWNARMLDVSVEGQRGITSRTDG---ELEWEACLAESGIVPHVETVLESAKRWYGCDRTPNNRTSCEDSRCPICWEGSGLNNNDIRCLRFKHGVPPRASSGLGRFKGGDVRSATCTGTTPRDWAVGDGSGEDVEIFTSRRAHAAGLSVDGGVTLAKILYFF 585
L++LD +L GG+ + D EG +PT M G HGSA W A +L T T G WEACL+E + P +L + WY C R+ D R L N+DI C R KHGVP SSGLGRFKGGDV++AT G TPR WAVG G G+ VEIFT+ +A LS DG VTLA+ILYFF
Sbjct: 90 LQALDDSLSGGITNVVDGTEGTKPTAAMLAGQPHGSATWRATILRQDAAPDDVGTGSTGGGGPREAWEACLSEGAVRPSAGAILNANTLWYACGRSDG------DGR-------DSLKNDDIICYRIKHGVPAEISSGLGRFKGGDVKAATAGGATPRHWAVGSGQGDAVEIFTNHKAKRDDLSGDGHVTLARILYFF 274
BLAST of mRNA_F-serratus_M_contig743.18688.1 vs. uniprot
Match: A0A6H5K4J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J5_9PHAE) HSP 1 Score: 120 bits (300), Expect = 1.060e-28 Identity = 57/98 (58.16%), Postives = 69/98 (70.41%), Query Frame = 1
Query: 298 CEDSRCPICWEGSG--LNNNDIRCLRFKHGVPPRASSGLGRFKGGDVRSATCTGTTPRDWAVGDGSGEDVEIFTSRRAHAAGLSVDGGVTLAKILYFF 585
C + RCP CWEG G L+N++I C R KHGVP ++SSG+ KGGDV++AT G PRDWAVG G G+DVEIFT+ +A LS G VTL KILY F
Sbjct: 193 CSELRCPCCWEGGGGKLDNSNISCSRIKHGVPAKSSSGMCYSKGGDVKAATNEGANPRDWAVGAGGGQDVEIFTTPKAREDDLSGGGDVTLGKILYLF 290
BLAST of mRNA_F-serratus_M_contig743.18688.1 vs. uniprot
Match: A0A6H5K8J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8J7_9PHAE) HSP 1 Score: 113 bits (283), Expect = 3.830e-26 Identity = 74/199 (37.19%), Postives = 102/199 (51.26%), Query Frame = 1
Query: 1 LKSLDGALRGGLDS-PRDPDEGARPTMTMARGTFHGSAKWNARMLDVSVEGQRGITSRTDGELEWEACLAESGIVPHVETVLESAKRWYGCDRTPNNRTSCEDSRCPICW-EGSGLNNNDIRCLRFKHGVPPRASSGLGRFKGGDVRSATCTGTTPRDWAVGDGSGEDVEIFTSRR----AHAAGLSVDGGVTLAKILY 579
L SL L GGL S P D + PT F G+A W + + + G + G WE+ +A + P +T++ + ++ C R CE+ RC CW S L++ DI C RFKHG P RA SGLGR+KG DVR++T T DW +G+G GEDVE F + H G + G++LA+ILY
Sbjct: 146 LWSLGNVLPGGLSSTPTDARAASTPTAAQRAAQFPGAATWTSVLWEA---GSPWGNDASGGG--WESRIATGPLRPDEKTLIGAYNTYFSCGRADGGAL-CEEPRCADCWLNSSTLDDKDIICTRFKHGAPLRAGSGLGRWKGDDVRASTRT-APGGDWWLGEGCGEDVEFFKEQPFDDDVHD-GPAQASGLSLARILY 336
BLAST of mRNA_F-serratus_M_contig743.18688.1 vs. uniprot
Match: A0A6H5K9M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9M0_9PHAE) HSP 1 Score: 112 bits (279), Expect = 4.140e-25 Identity = 79/201 (39.30%), Postives = 102/201 (50.75%), Query Frame = 1
Query: 1 LKSLDGALRGGLDSPRDPDEGARPTMTMARGTFHGSAKWNARMLDVSVEGQRGITSRTDGELEWEACLAESGIVPHVETVLESAKRWYGCDRTPNNRTSCEDSRCPICWEGSG----LNNNDIRCLRFKHGVPPRASSGLGRFKGGDVRSATCTGTTPRD-WAVGDGSGEDVEIFTSRRAHA-AGLSVDGGVTLAKILYFF 585
+KSL +L G P D A T RG F GSA W A + E R DG+ W +A S P +T+L K++YGCD + +C SRCP CW G G L+ + RC+R VP AS GLGR KGGDV+S + G PRD WA+G G G++VE+ A A G + + L K+LYFF
Sbjct: 1070 MKSL-ASLVGHDGVPTDIHAEAVQTPAQLRGQFPGSAVWTASLFKTGDE------QRQDGD--WLLRVASSKFRPDGQTLLRGYKKYYGCDMSG----TCTSSRCPNCWGGDGALEYLSIDCSRCIR----VPMAASCGLGRLKGGDVKSTSQPG--PRDEWALGSGGGDNVEVHKQASAWAEVGRADPRDLNLVKVLYFF 1251
BLAST of mRNA_F-serratus_M_contig743.18688.1 vs. uniprot
Match: A0A6H5KNJ3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNJ3_9PHAE) HSP 1 Score: 107 bits (268), Expect = 3.890e-24 Identity = 70/183 (38.25%), Postives = 90/183 (49.18%), Query Frame = 1
Query: 43 PRDPDEGARPTMTMARGTFHGSAKWNARMLDVSVEGQRGITSRTDGELEWEACLAESGIVPHVETVLESAKRWYGCDRTPNNRTSCEDSRCPICWEGSGLNNNDIRCLRFKHGVPPRASSGLGRFKGGDVRSATCTGTTPRD-WAVGDGSGEDVEIFTSRRAH-AAGLSVDGGVTLAKILYFF 585
P D A T G + GSA W A + + E Q DG+ W L S P +T+L + + +YGC C SRCP CW+G L I C R+ P AS GLGR KGGDV+SA G PRD WA+G G G++VE++ AAG + +TL K+LYFF
Sbjct: 127 PTDIHAEAVQTPAQLSGQYPGSAVWTASLFNNGDEQQ------LDGD--WRPRLVSSKFRPDEQTLLRAYQTYYGCGMAG----PCSSSRCPNCWDGDTLQQASIDCSRYIR-APMVASCGLGRLKGGDVKSAAQAG--PRDEWALGSGGGDNVEVYKQLPPMPAAGRADPTDLTLVKVLYFF 294 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig743.18688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig743.18688.1 >prot_F-serratus_M_contig743.18688.1 ID=prot_F-serratus_M_contig743.18688.1|Name=mRNA_F-serratus_M_contig743.18688.1|organism=Fucus serratus male|type=polypeptide|length=195bp LKSLDGALRGGLDSPRDPDEGARPTMTMARGTFHGSAKWNARMLDVSVEGback to top mRNA from alignment at F-serratus_M_contig743:378362..378947+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig743.18688.1 ID=mRNA_F-serratus_M_contig743.18688.1|Name=mRNA_F-serratus_M_contig743.18688.1|organism=Fucus serratus male|type=mRNA|length=586bp|location=Sequence derived from alignment at F-serratus_M_contig743:378362..378947+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig743:378362..378947+ >mRNA_F-serratus_M_contig743.18688.1 ID=mRNA_F-serratus_M_contig743.18688.1|Name=mRNA_F-serratus_M_contig743.18688.1|organism=Fucus serratus male|type=CDS|length=1170bp|location=Sequence derived from alignment at F-serratus_M_contig743:378362..378947+ (Fucus serratus male)back to top |