prot_F-serratus_M_contig741.18677.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig741.18677.1
Unique Nameprot_F-serratus_M_contig741.18677.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length388
Homology
BLAST of mRNA_F-serratus_M_contig741.18677.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 1.450e-34
Identity = 135/442 (30.54%), Postives = 196/442 (44.34%), Query Frame = 0
Query:    1 MTALMHAARGGRLAFNLAVVKIDNLLGNSTSLGYSPLTDIQFLDAALGVDEFDGDSPARDRRR-----GMLLEEAAAGGSLDVLQQVALEITR------------------KDQRPTDDS--ASPDSPTLLRVLKSINGRGTCLLRSAISSGNTRMVKWVAELISHHYRD-SKEVWDRLRGHTGEKSSLACAALTPTTAKKSGRHMFDTVLRCLRQAAKNMYDDPPRQQDVSPRPTKKVFVNELLRNELVVTREDSNDRGGGKTSISPLGGAVLQSNRQLFKRVYEAYRQ-CGGRWNRHQILNQLRGETIHARLNRDSYSVAS-DGDVVA-------NVPAQMWHTLARAFEVAD--GGDA---------------AWARWTLCFSK-TVQALAERGDLAQIRTLVKEKFPLYAH-IPVLLERIGDHQENIIETVALVVVHA 388
            +T LMHAARGG ++  LA+ K+     N    G++       LD AL V+   G++  +  R       +LL  AA  G +DVL  V L I +                  K +RP        P    +   +++IN RG  +   AI SG T  ++ V +L+   + D + + WD L G T + SSL CAA     A   G  MFD V   L+Q      DD             ++ V   L     +       RG GK  ISPL GA   SN  LF++VY+ Y +  G RW R Q+L Q+       R   +   +   + D+ A       ++PA MW  + +A++ A     DA               +W      +S+  V+  A+RG    +R LV+E FPL+ H IP LLE IGDH+++IIET+   V +A
Sbjct:  323 VTELMHAARGGLVSLELALNKLPLASRNIAEGGFTVA-----LDNALAVNMTIGNTQEQSHRTKAWGWALLLAAAAKLGDIDVLYHVLLAIKKGKFTLVKHGENDHDFRLAKVERPAGGGWVELPRGDRVQEAVRAINTRGKSVFSYAILSGRTDAMELVYDLVRGLFGDKTSQTWDTLSGKTNKSSSLTCAASASMEADNHGITMFDKVFSLLQQQT----DD-------------RLLVQRQLSPRFAMPH-----RGKGKVKISPLVGAAFSSNWILFRKVYDTYEEWTGHRWWRQQVLAQIPSGPPRRRSVLELQEMHDCEDDIPALIIRGAWSIPAVMWRDIVKAYQRAQLCSPDATSRGVPQPLRINPLPSWRDEFKGYSRRAVKEAAKRGTFRSLRDLVQEGFPLHEHHIPALLENIGDHEKDIIETILATVTNA 737          
BLAST of mRNA_F-serratus_M_contig741.18677.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 5.500e-22
Identity = 132/422 (31.28%), Postives = 169/422 (40.05%), Query Frame = 0
Query:    1 MTALMHAARGGRLAFNLAVVKIDNLLGNSTSLGYSPLTDIQF-LDAALGVDEFDGDSPARDRRR---------GMLLEEAAAGGSLDVLQQVALEIT---------------RKDQRPTDDSASPDSPTLLRVLKSINGRGTCLLRSAISSGNTRMVKWVAELISHHY-RDSKEVWDRLRGH------TGEKSSLACAALTPTTAKKSGRHMFDTVLRCLRQAAKNMYDDPPRQQDVSPRPTKKVFVNELLRNELVVTREDSNDRGGGKTSISPLGGAVLQSNRQLFKRVYEAYRQCGGR-WNRHQILNQLRGETIHARLNRDSYSVASDGDVVANVPAQMWHTLARAFEVADGGDAAWARWTLCFSKTVQALAERGDLAQIRTLVKEKFPLYA-HIPVLLERIGDHQENIIETVALVVVHA 388
            +T LMHAARGG ++  LA+         +  L  S L D    LD AL V+  D   PA D  R         G+LL  AA  G +DVL  V   I                RK +    +    D   +  V++ ++  G  L   AI SG T  VK V  LI   + +   E W  L G         E S LACAA         GR  FD V   L+  A    D+   +  + P+P             L +T          KT ISPL GA   SN  LF RVY+ Y     + W R    N LR  T          S  S G+ + +     W    RA+                 S+ V   +ERG    +R LVKE FPL+  HIP LL  IGDH+++IIETV   V +A
Sbjct:  306 VTELMHAARGGLVSLELAL---------NEPLPSSRLEDGSISLDGALNVEACD--EPASDEPRWEPQPAWGKGLLLAAAAERGDIDVLHVVLTAIKDNKFTKEPNTDRFTLRKQESRLAELPYGDGEKVRTVVREMSKGGKSLFSEAILSGQTVAVKHVYRLIVKLFGKTHPETWAILTGRDFNSGKVAEASPLACAASASMEPCDHGRDTFDLVYSYLQTHAP---DEKKLRIQLVPQPP-----------PLDLT---------AKTQISPLVGAAFSSNWILFWRVYDTYTTLAKKPWLR---TNALRRAT----------SDKSGGEELMS-----WREYLRAYS----------------SRAVHVASERGAFTDLRDLVKEGFPLHDDHIPALLVSIGDHEQDIIETVLFAVANA 659          
BLAST of mRNA_F-serratus_M_contig741.18677.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 2.860e-20
Identity = 109/398 (27.39%), Postives = 158/398 (39.70%), Query Frame = 0
Query:   63 RGMLLEEAAAGGSLDVLQQVALEIT--------------RKDQRP--TDDS--ASPDSPTLLRVLKSINGRGTCLLRSAISSGNTRMVKWVAELISH---------------HYRDSKE---------------------VWDRLRGHTGEKSSLACAALTPTTAKKSGRHMFDTVLRCLRQAAKNMYDDPPRQQDVSPRPTKKVFVNELLRNELVVTREDSNDRGGGKTSISPLGGAVLQSNRQLFKRVYEAYRQCGGR-WNRHQILNQLRGETIHARLNRDSYSVASDGDVVA--------NVPAQMWHTLARAFEVADGGDA--------------AWARWTLCFSKT-VQALAERGDLAQIRTLVKEKFPLYA-HIPVLLERIGDHQENIIETV 381
            R +LL  AA  G +DVL  V + I               R  +RP   D++  A P S  L  VL  IN R   L   AI S     V+ + +L+                  +RD  +                     +W  L GH+   SSL CAA     A  +GR MF  V   L +  +    +             K F  ELL  + +  +  S D+   + SISPL GAV  SN  LF+ VY+ Y +  G  W R  +L Q+     H R       +    D +          +PA MW  + +A++  +  D               +W      +S+   +  A+RGD   +R LV E FPL+  H+P LLE IGDH+ ++I+T+
Sbjct:  408 RALLLAAAARLGDVDVLYHVLVAIEDDEFFLEADDAGKFRLPERPIPVDETPTAIPVSNKLREVLGMINSRNVSLFSLAILSRRHEAVELIFDLVVRLFGEDQSSRNDQRAVRFRDGDDGDQGHQGQGQRDRGNQPHHDTIWSILTGHSHTTSSLTCAASVSMEADGNGRTMFCLVFEMLEKQFRRGVGE-------------KKF-RELLSPKSMTLKSSSTDQ---EHSISPLAGAVFSSNWVLFREVYDRYEKLAGCCWQRETVLKQIPQGPPHGRSVLKDEELHEYHDNIPPLITRGAWTIPAVMWPDIVKAYKRGEPDDREGYCCCGRQHQRLLSWRDDFKHYSRRGAKVAAKRGDFTALRELVNEGFPLHDDHMPFLLENIGDHEHDVIDTI 788          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig741.18677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LH99_ECTSI1.450e-3430.54Ankyrin Repeat Transient Receptor Potential Channe... [more]
D8LH97_ECTSI5.500e-2231.28Ankyrin Repeat Transient Receptor Potential Channe... [more]
D8LHA0_ECTSI2.860e-2027.39Transient Receptor Potential Channel. Partial sequ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig741contigF-serratus_M_contig741:211835..216222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig741.18677.1mRNA_F-serratus_M_contig741.18677.1Fucus serratus malemRNAF-serratus_M_contig741 211809..216222 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig741.18677.1 ID=prot_F-serratus_M_contig741.18677.1|Name=mRNA_F-serratus_M_contig741.18677.1|organism=Fucus serratus male|type=polypeptide|length=388bp
MTALMHAARGGRLAFNLAVVKIDNLLGNSTSLGYSPLTDIQFLDAALGVD
EFDGDSPARDRRRGMLLEEAAAGGSLDVLQQVALEITRKDQRPTDDSASP
DSPTLLRVLKSINGRGTCLLRSAISSGNTRMVKWVAELISHHYRDSKEVW
DRLRGHTGEKSSLACAALTPTTAKKSGRHMFDTVLRCLRQAAKNMYDDPP
RQQDVSPRPTKKVFVNELLRNELVVTREDSNDRGGGKTSISPLGGAVLQS
NRQLFKRVYEAYRQCGGRWNRHQILNQLRGETIHARLNRDSYSVASDGDV
VANVPAQMWHTLARAFEVADGGDAAWARWTLCFSKTVQALAERGDLAQIR
TLVKEKFPLYAHIPVLLERIGDHQENIIETVALVVVHA
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