mRNA_F-serratus_M_contig1247.1867.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1247.1867.1 vs. uniprot
Match: A0A6H5KX94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX94_9PHAE) HSP 1 Score: 286 bits (733), Expect = 7.560e-91 Identity = 190/399 (47.62%), Postives = 230/399 (57.64%), Query Frame = 1
Query: 28 MALVPFSYANPFTDQLKLKERLFTIDGRLLRIKQAWKEGGKGGTDVGFGASVYPAAYVLAEHLERHPHLVRGKRVIELDACFSTFLYLLLCSLAFLSLRAPQFPGASEVCLTDGDDESLRLTRDNVEANTPQGLWKSGRYRHLTTATDDCPLPLAVVERDA------GDGDRGS----------HPPAMT-----VRKLRWGCVDDMAALHLD--------SPR-WDVVLGSDIAALPYESSFKDLLRTIVALV---EGRGGRAGEVAEPPLLTTPSAAPIALVCPERTTISSVRAQKTKNGSDGEGVTSPPLLPLPDDAAKEKWLHEDVPKRG---RGRGGVLVLLAHKQRHVSEEAFFEALKNELGEESSLP-TREDDVHPDFRGEGIVIHKYQLFV 1113
MALV SYA+PFTDQL+L+ERLFTIDG+LL+I+QAWK GKGGTD+GFGASVYPAAYVLAE+LERHP+LVRGKRVIEL FL + A GA+EVCLTDGD+ESL+LT+ NV N + R T + D AV D D GS PP T V++LRWGC DDM A+ + SPR WDVVLGSDIAALPY S++ DLL+TIV+LV +G G PP + A + T ISS A + DG G S P + K + + + G GR V+VLLAHK+RH+SEEAFFE LK ELG E S+ T EDD+HPDFRG GI +H + + V
Sbjct: 1 MALVLHSYASPFTDQLQLRERLFTIDGKLLKIQQAWKGDGKGGTDIGFGASVYPAAYVLAEYLERHPYLVRGKRVIELGT-----------GTGFLGIAAATL-GAAEVCLTDGDEESLKLTQRNVTGNLSPAVC---RRSPSTASCCDQQQAQAVTAADKERTPCNADSTAGSTNIVESPVDRRPPLATAATVSVQQLRWGCADDMHAVGVPRRGDGDSGSPRAWDVVLGSDIAALPYASAYGDLLQTIVSLVNITDGSGQDKHTAPSPPR----TIADHVTGADQNTEISSTAAPDSCEPLDGSGRESGTGKPAITKTSAMKGVMAEAGRSGSEREGRRQVVVLLAHKRRHISEEAFFEDLKEELGGERSVRGTSEDDIHPDFRGTGIRLHMFVVDV 380
BLAST of mRNA_F-serratus_M_contig1247.1867.1 vs. uniprot
Match: D7FHI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHI4_ECTSI) HSP 1 Score: 285 bits (728), Expect = 7.190e-90 Identity = 190/406 (46.80%), Postives = 227/406 (55.91%), Query Frame = 1
Query: 28 MALVPFSYANPFTDQLKLKERLFTIDGRLLRIKQAWKEGGKGGTDVGFGASVYPAAYVLAEHLERHPHLVRGKRVIELDACFSTFLYLLLCSLAFLSLRAPQFPGASEVCLTDGDDESLRLTRDNVEANTPQGLWKSGRYRHLTTATDDCPLPLAVVERDAG---DGDRGS----------HPPAMT------------VRKLRWGCVDDMAALHL---------DSPRWDVVLGSDIAALPYESSFKDLLRTIVALVEGRGGRAGEVAEPPLLTTPSAAPIALVCP------ERTTISSVRAQKTKNGSDGEGVTSPPLLPLPDDAAKEKWLHEDVPKRGRGRGG---VLVLLAHKQRHVSEEAFFEALKNELGEESSLP-TREDDVHPDFRGEGIVIHKYQLFV 1113
MALV SYA+PFTDQL+LKER FTIDG+LL+I+QAWK GKGGTD+GFGASVYPAAYVLAE+LERHP+LVRGKRVIEL C + L A L F GA+EVCLTDGD+ESL+LT+ NV N + A E G D GS PP T V+KLRWGC DDM A + S WDVVLGSDIAALPY S++ DLL+TIV+LV G +G+V+ T PS P + + T IS+ A + DG G S P + K L D + R G V+VLLAHK+RHVSEEAFFE L+ ELG E S+ T EDD+HPDFRG GI +H + + V
Sbjct: 1 MALVLHSYASPFTDQLQLKERFFTIDGKLLKIQQAWKGDGKGGTDIGFGASVYPAAYVLAEYLERHPYLVRGKRVIELGGCCAIPARAAL--FAALQYHCMTFKGAAEVCLTDGDEESLKLTQRNVTDNLQPDFSRRSPSTASCCDQQQAQDATAAEEERTGCNADSKGGSTNSVESSADRRPPQATAATISATAATISVQKLRWGCADDMHAAGVPLGGDGDSGSSRAWDVVLGSDIAALPYASAYGDLLQTIVSLVNNTKG-SGQVSH----TAPS--PPRTISDHVTGEDQNTEISNTAASDSCEALDGSGCESGRGEPAIIKTSPMKGLMADAGRSRSERAGRRRVVVLLAHKRRHVSEEAFFEDLREELGGERSVRGTSEDDIHPDFRGTGIRLHMFVVDV 397
BLAST of mRNA_F-serratus_M_contig1247.1867.1 vs. uniprot
Match: A0A7R9UFK0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFK0_9STRA) HSP 1 Score: 124 bits (311), Expect = 4.970e-29 Identity = 81/231 (35.06%), Postives = 120/231 (51.95%), Query Frame = 1
Query: 19 ERDMALVPFSYANPFTDQLKLKERLFTIDGRLLRIKQAWKEGGKGGTDVGFGASVYPAAYVLAEHLERHPHLVRGKRVIELDACFSTFLYLLLCSLAFLSLRAPQFPGASEVCLTDGDDESLRLTRDNVEANTPQGLWKSGRYRHLTTATDDCPLPLAVVERDAGDGDRGSHPPAMTVRKLRWGCVDDMAALHLDSPRWDVVLGSDIAALPYESSFKDLLRTIVALVEGRG 711
+ DM++VPF+Y N FT+++KL ER F + GR LRI+Q + GKGG+ +GFG S Y AA+VL+ LE + +V GKRV+EL C +++ A AS V TDGD E L L +N AN + E +A A+ V + WG + ALH P +DVVL +D+AA+PYE +++ L++++++LV G
Sbjct: 18 KSDMSIVPFTYNNAFTEEVKLPERHFELFGRFLRIQQRYAADGKGGSALGFGKSAYNAAFVLSALLESNADIVEGKRVVELG-----------CGPGLVAIAAA-LAKASRVLATDGDAEVLNLAAENFAAN--------------------------LNEEEA---------KAVAVAEFLWGDEEQRRALH--GP-FDVVLAADVAAVPYEEAYEALVQSLLSLVSPEG 198
BLAST of mRNA_F-serratus_M_contig1247.1867.1 vs. uniprot
Match: A0A0N7L683_PLAHL (Predicted methyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L683_PLAHL) HSP 1 Score: 121 bits (304), Expect = 1.270e-28 Identity = 79/225 (35.11%), Postives = 111/225 (49.33%), Query Frame = 1
Query: 16 PERDMALVPFSYANPFTDQLKLKERLFTIDGRLLRIKQAWKEGGKGGTDVGFGASVYPAAYVLAEHLERHPHLVRGKRVIELDACFSTFLYLLLCSLAFLSLRAPQFPGASEVCLTDGDDESLRLTRDNVEANTPQGLWKSGRYRHLTTATDDCPLPLAVVERDAGDGDRGSHPPAMTVRKLRWGCVDD-MAALHLDSPRWDVVLGSDIAALPYESSFKDLLRTI 687
P ALVPFS+ NPF + L+ R F I G+ +RI QAW+ G+GGT +G+GASVY AA L+ +L HP LV+G R+IEL C + + A S V +TDGD S+ LT+ NV N + D C TV K WG ++ + ++H +DV++G+DI A PY S+FK+L+RT+
Sbjct: 22 PVAASALVPFSFHNPFHNALQDATRWFPIAGKAIRIDQAWQSDGRGGTTLGYGASVYDAAIALSLYLVDHPDLVKGNRIIELG-----------CGPGLVGVVAAHLEPKS-VVITDGDSASVALTQHNVHLNN--------------LSADIC-----------------------TVEKYIWGDLEHHLVSMHAP---YDVIIGADIVACPYASAFKELMRTL 194
BLAST of mRNA_F-serratus_M_contig1247.1867.1 vs. uniprot
Match: W2NJ79_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2NJ79_PHYPR) HSP 1 Score: 120 bits (301), Expect = 3.520e-28 Identity = 79/227 (34.80%), Postives = 109/227 (48.02%), Query Frame = 1
Query: 16 PERDMALVPFSYANPFTDQLKLKERLFTIDGRLLRIKQAWKEGGKGGTDVGFGASVYPAAYVLAEHLERHPHLVRGKRVIELDACFSTFLYLLLCSLAFLSLRAPQFPGASEVCLTDGDDESLRLTRDNVEANTPQGLWKSGRYRHLTTATDDCPLPLAVVERDAGDGDRGSHPPAMTVRKLRWGCVDDMAALHLDSPRWDVVLGSDIAALPYESSFKDLLRTIVAL 696
P ALVPFS+ NPF D L+ R F I G+ +RI QAW+ G+GGT +GFGASVY AA L+ +L HP LV+GKRV+EL C + + A S + +TDGD S+ LT+ N+E N + + C T K WG DM + +DV+LG+DI A PY S+F+ L+ ++ A+
Sbjct: 26 PSAASALVPFSFRNPFHDALRDATRWFPIAGKRIRIDQAWQSDGRGGTTLGFGASVYDAAIALSLYLAAHPDLVKGKRVVELG-----------CGPGLVGVVAAHLQPKS-IVVTDGDPASVALTQHNIEVNE--------------LSKEIC-----------------------TADKYLWG---DMEHHLVRGHNYDVILGADIVACPYASAFEALMTSLQAM 200
BLAST of mRNA_F-serratus_M_contig1247.1867.1 vs. uniprot
Match: A0A484DR85_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DR85_BRELC) HSP 1 Score: 117 bits (294), Expect = 3.990e-27 Identity = 77/224 (34.38%), Postives = 104/224 (46.43%), Query Frame = 1
Query: 16 PERDMALVPFSYANPFTDQLKLKERLFTIDGRLLRIKQAWKEGGKGGTDVGFGASVYPAAYVLAEHLERHPHLVRGKRVIELDACFSTFLYLLLCSLAFLSLRAPQFPGASEVCLTDGDDESLRLTRDNVEANTPQGLWKSGRYRHLTTATDDCPLPLAVVERDAGDGDRGSHPPAMTVRKLRWGCVDDMAALHLDSPRWDVVLGSDIAALPYESSFKDLLRTI 687
P +V FS+ NPF D L+ R F I G+ +RI QAW+ G+GGT +GFGASVY AA L+ ++ HPHLV+GKRVIEL C + + A F V +TDGD S+ LTR N+ N + + C T K WG + DS +D++LG+DI A PY S+F LL ++
Sbjct: 23 PPTTSQIVAFSFRNPFHDALRDSTRRFPIAGKSIRIDQAWQSDGRGGTALGFGASVYDAAIALSLYIADHPHLVKGKRVIELG-----------CGPGLVGIVAAHFE-PKHVVITDGDPASVALTRHNIRLND--------------VSEEIC-----------------------TTDKYLWGDLKHHLVEEHDS--FDIILGADIVACPYASAFNALLTSL 195
BLAST of mRNA_F-serratus_M_contig1247.1867.1 vs. uniprot
Match: A0A8K1C253_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C253_PYTOL) HSP 1 Score: 117 bits (292), Expect = 6.280e-27 Identity = 81/224 (36.16%), Postives = 107/224 (47.77%), Query Frame = 1
Query: 31 ALVPFSYANPFTDQLKLKERLFTIDGRLLRIKQAWKEGGKGGTDVGFGASVYPAAYVLAEHLERHPHLVRGKRVIELDACFSTFLYLLLCSLAFLSLRAPQFPGASEVCLTDGDDESLRLTRDNVEANTPQGLWKSGRYRHLTTATDDCPLPLAVVERDAGDGDRGSHPPAMTVRKLRWGCVDDMAALHLDSPRWDVVLGSDIAALPYESSFKDLLRTIVALVE 702
ALVPFS+ NPF D L+ + R F I R + I+Q WK GKGGT +GFGASVY AA L+ +LE H LVR KRVIEL C + + A A +V +TDGD S+ LT N+E N +E+ P + WG D+ + D+P +DVV+G+DI A PY +F LLR + L +
Sbjct: 28 ALVPFSFRNPFHDALRDEIRRFPIAKRQIMIRQGWKNDGKGGTTLGFGASVYDAAIALSLYLEAHCDLVRNKRVIELG-----------CGPGLVGIVAAHLQ-ADQVVVTDGDPASVHLTAANIELNE--------------------------LEK-----------PQCIATEYLWG--DETNGVLQDAP-YDVVVGADIVACPYADAFDALLRAFLQLTD 199
BLAST of mRNA_F-serratus_M_contig1247.1867.1 vs. uniprot
Match: A0A3R7KI17_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KI17_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.280e-26 Identity = 78/222 (35.14%), Postives = 105/222 (47.30%), Query Frame = 1
Query: 31 ALVPFSYANPFTDQLKLKERLFTIDGRLLRIKQAWKEGGKGGTDVGFGASVYPAAYVLAEHLERHPHLVRGKRVIELDACFSTFLYLLLCSLAFLSLRAPQFPGASEVCLTDGDDESLRLTRDNVEANTPQGLWKSGRYRHLTTATDDCPLPLAVVERDAGDGDRGSHPPAMTVRKLRWGCVDDMAALHLDSPRWDVVLGSDIAALPYESSFKDLLRTIVAL 696
ALVPFS+ N F D L+ R F I G+ ++I QAW+ G+GGT +GFGASVY AA L+ +LE H L+ GKRVIEL C + + A F V +TDGD S+ LT N+ N LP V T K WG +D L + +DV+LG+DI A PY S+F+ L+ ++ A+
Sbjct: 44 ALVPFSFRNHFHDALRDATRWFPIAGKRIQIDQAWQGDGRGGTAIGFGASVYDAAIALSLYLESHRDLIHGKRVIELG-----------CGPGLVGVVAAHFE-PKNVVITDGDPASVELTLQNIGVNN---------------------LPAEVC----------------TAEKYLWGDLDHR--LVSKTNHYDVILGADIVACPYASAFEALMESLQAM 214
BLAST of mRNA_F-serratus_M_contig1247.1867.1 vs. uniprot
Match: A0A2D4CGG4_PYTIN (Uncharacterized protein (Fragment) n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CGG4_PYTIN) HSP 1 Score: 114 bits (285), Expect = 2.900e-26 Identity = 81/222 (36.49%), Postives = 108/222 (48.65%), Query Frame = 1
Query: 31 ALVPFSYANPFTDQLKLKERLFTIDGRLLRIKQAWKEGGKGGTDVGFGASVYPAAYVLAEHLERHPHLVRGKRVIELDACFSTFLYLLLCSLAFLSLRAPQFPGASEVCLTDGDDESLRLTRDNVEANTPQGLWKSGRYRHLTTATDDCPLPLAVVERDAGDGDRGSHPPAMTVRKLRWGCVDDMAALHLDSPRWDVVLGSDIAALPYESSFKDLLRTIVAL 696
ALVPFS+ NP+ D L+ + R F I R + I+QAW+ GKGGT +GFGASVY AA L+ L+ H LV+GKRVIEL C + + A AS V +TDGDD S+ LT N+ N+ ++ DA R P + WG D A+ L +DV+LG+DI A PY +F LL+ + L
Sbjct: 20 ALVPFSFLNPYHDALRDELRRFPIADRQILIQQAWQPDGKGGTAIGFGASVYDAAIALSLFLDSHRDLVQGKRVIELG-----------CGPGLVGIVAAHLNAAS-VLVTDGDDASVALTATNISRNS--------------------------LDADA----RCRAAPYL------WG---DAASCVLQDAPFDVILGADIVACPYADAFDALLQAFLQL 190
BLAST of mRNA_F-serratus_M_contig1247.1867.1 vs. uniprot
Match: A0A662XPA4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPA4_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.420e-26 Identity = 81/223 (36.32%), Postives = 106/223 (47.53%), Query Frame = 1
Query: 31 ALVPFSYANPFTDQLKLKERLFTIDGRLLRIKQAWKEGGKGGTDVGFGASVYPAAYVLAEHLERHPHLVRGKRVIELDACFSTFLYLLLCSLAFLSLRAPQFPGASEVCLTDGDDESLRLTRDNVEANTPQGLWKSGRYRHLTTATDDCPLPLAVVERDAGDGDRGSHPPAMTVRKLRWGCVDDMAALHLDSP-RWDVVLGSDIAALPYESSFKDLLRTIVAL 696
ALVPFS+ NPF D L+ R F I G+ +RI QAW+ G+GGT +GFGASVY AA L+ +LE H V GKRVIEL C + + A V +TDGD S+ LTR N+ AT+ P L V E + WG V ++P +DV+LG+DI A PY S+F L+ ++ AL
Sbjct: 24 ALVPFSFRNPFHDALRDATRWFPIAGKRIRIDQAWQSDGRGGTALGFGASVYDAAIALSLYLEAHRGTVGGKRVIELG-----------CGPGLVGVVAAHL-NPKYVVITDGDPASVTLTRRNI-------------------ATNALPDDLCVAE------------------EYLWGDVKHHLVPTPENPVHYDVILGADIVACPYASAFDALMASLRAL 197 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1247.1867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1247.1867.1 >prot_F-serratus_M_contig1247.1867.1 ID=prot_F-serratus_M_contig1247.1867.1|Name=mRNA_F-serratus_M_contig1247.1867.1|organism=Fucus serratus male|type=polypeptide|length=363bp MALVPFSYANPFTDQLKLKERLFTIDGRLLRIKQAWKEGGKGGTDVGFGAback to top mRNA from alignment at F-serratus_M_contig1247:80172..91865- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1247.1867.1 ID=mRNA_F-serratus_M_contig1247.1867.1|Name=mRNA_F-serratus_M_contig1247.1867.1|organism=Fucus serratus male|type=mRNA|length=11694bp|location=Sequence derived from alignment at F-serratus_M_contig1247:80172..91865- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1247:80172..91865- >mRNA_F-serratus_M_contig1247.1867.1 ID=mRNA_F-serratus_M_contig1247.1867.1|Name=mRNA_F-serratus_M_contig1247.1867.1|organism=Fucus serratus male|type=CDS|length=2178bp|location=Sequence derived from alignment at F-serratus_M_contig1247:80172..91865- (Fucus serratus male)back to top |