prot_F-serratus_M_contig740.18661.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig740.18661.1
Unique Nameprot_F-serratus_M_contig740.18661.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1168
Homology
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: A0A6H5JUP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUP0_9PHAE)

HSP 1 Score: 1180 bits (3053), Expect = 0.000e+0
Identity = 624/878 (71.07%), Postives = 690/878 (78.59%), Query Frame = 0
Query:  322 RQDKQAAAIQRQGLKVGAFGKERLVYHNDYVVHEDLGFCRYLAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRMPVDIRVALLRGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVKGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITLEYLPNSEPSSPVATATSAGADEDPKG---WAAGPPKNPFASALKHPLSSAAAAGDASTPSGTPPGGVREAGEGQQAQFQEAG-------------------------------RRNGWVGSPADARGRRTAAGRKAGGGGEGDTSVTAVTATAGAVAATEEVPFAVMRGADVEQERWEILLRQGPLGQDSLRHVCFRHDAGGVVLRGVSGKEEAWLRGEREEWLDHLLSVLLPLVEYVETKQSLQL--TMTPPTR 1163
            RQD  +A IQ+QGLKVGAFGKER+VYH+DY+VHEDLGFCRYLAPEF  DA  +EI+LEF+D NLPI +D+S+LLTRYRAADAARVPLSVV +Q +WLRHKLKVQERVTKQA+NVMDLYAKRAR+ER+PC+PDGP+M+ FC GF++ PT DQLRCL EIE+DM+WRK+PMDRLLCGDVGFGKTEVA+RA+FRMVR+ KQVALLAPTTILAAQHYRTLLKRMP D+ VALLRGGN++GSR IKEAIRN TV VVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVL+TGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPP  RQNVTTYIMK TD+I++RA+TREMSRGGQVF VVPRINQIE AW QI+RCVP A+VAVGHSK+K LEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVV DSHMFGLSQLYQMRGRVGRS+VAAYTYLLYPPGH L+NEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDI PVLRCEVDMGF  EL+GSVPA+YMTC+DEER RQ++RLRVCNSFRELVRIAKEWV +Y EMP+ VRRLFKHTHL+TACRLLG+SS++LE+LP  + S   A A   G  +   G   W     K P    L+                         A E   AQ +EA                                                       GG   GD                + VPFAVMRG +VEQERWEIL RQGPL    L+ + FR D GGV LRGV+G+EEAWL+G+REEWLDHLLSVLLPLVEYVETKQSLQ+  T  PP +
Sbjct:  331 RQDALSANIQKQGLKVGAFGKERIVYHHDYMVHEDLGFCRYLAPEFTPDANPDEILLEFSDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVNVALLRGGNSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQVFYVVPRINQIEDAWLQISRCVPNARVAVGHSKIKNLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVQDSHMFGLSQLYQMRGRVGRSDVAAYTYLLYPPGHQLSNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDIQPVLRCEVDMGFGDELKGSVPADYMTCDDEERERQIDRLRVCNSFRELVRIAKEWVNSYSEMPVAVRRLFKHTHLNTACRLLGISSLSLEFLPERDASLGEADAAGEGGGDAVNGGAGWTGAGAKKPMVEDLE------------------------AARESHAAQDREASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGVKSGDP--------------VKLVPFAVMRGPEVEQERWEILFRQGPLEYSQLQRMSFRGDVGGVALRGVAGEEEAWLKGDREEWLDHLLSVLLPLVEYVETKQSLQMKSTRAPPPK 1170          
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: D8LDP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP5_ECTSI)

HSP 1 Score: 1155 bits (2987), Expect = 0.000e+0
Identity = 611/830 (73.61%), Postives = 674/830 (81.20%), Query Frame = 0
Query:  352 VVHEDLGFCRYLAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRMPVDIRVALLRGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVKGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITLEYLPNSEPSSPVATATSAGADEDPKG---WAAGPPKNPFASALKHPLSSAAAAGDASTPSGTPPGGVREAGEGQQAQFQEAGRRNGWVGSPADARGRRTAAGRKAGGGGEGDTSVTAVTATA----------GAVAATEEV---PFAVMRGADVEQERWEILLRQGPLGQDSLRHVCFRHDAGGVVLRGVSGKEEAWLRGEREEWLDHLLSVLLPLVEYVETKQSLQL--TMTPPTR 1163
            +VHEDLGFCRYLAPEF  DA  EEI+LEF+D NLPI +D+S+LLTRYRAADAARVPLSVV +Q +WLRHKLKVQERVTKQA+NVMDLYAKRAR+ER+PC+PDGP+M+ FC GF++ PT DQLRCL EIE+DM+WRK+PMDRLLCGDVGFGKTEVA+RA+FRMVR+ KQVALLAPTTILAAQHYRTLLKRMP D+ VALLRGGN++GSR IKEAIRN TV VVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVL+TGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPP  RQNVTTYIMK TD+I++RA+TREMSRGGQVF VVPRINQIE AW QI+RCVP A+VAVGHSK+K LEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVV DSHMFGLSQLYQMRGRVGRS+VAAYTYLLYPPGH L+NEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDI PVLRCEVDMGF  EL+GSVPA+YMTC+DEER RQ++RLRVCNSFRELVRIAKEWV +Y EMP+ VRRLFKHTHL+TACRLLG+SS++LE+LP  + S   A A   G  +   G   W     + P    L+    S AA               R AG G  +                      T  GR +GGG      V AV A            G V + E V   PFAVMRG +VEQERWEIL RQGPL    L+ + FR D GGV LRGV+G+EEAWL+G+REEWLDHLLSVLLPLVEYVETKQSLQ+  T  PP +
Sbjct:    1 MVHEDLGFCRYLAPEFTPDANPEEILLEFSDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVNVALLRGGNSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQVFYVVPRINQIEDAWLQISRCVPNARVAVGHSKIKNLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVQDSHMFGLSQLYQMRGRVGRSDVAAYTYLLYPPGHQLSNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDIQPVLRCEVDMGFGAELKGSVPADYMTCDDEERERQIDRLRVCNSFRELVRIAKEWVNSYSEMPVAVRRLFKHTHLNTACRLLGISSLSLEFLPERDASLGEADAAGEGGGDAVNGGVGWTGAGARKPMVEDLEAARESHAAQD-------------RAAGVGGDSXXXXXXXXXXXXXXXXXV---ATVNGRPSGGG--TPKQVVAVDAAXXXXXXPAPAPGGVKSGEPVKLVPFAVMRGPEVEQERWEILFRQGPLEYSQLQRISFRGDVGGVALRGVAGEEEAWLKGDREEWLDHLLSVLLPLVEYVETKQSLQMKSTRAPPPK 812          
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: A0A835YLF5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLF5_9STRA)

HSP 1 Score: 765 bits (1976), Expect = 3.180e-262
Identity = 392/614 (63.84%), Postives = 472/614 (76.87%), Query Frame = 0
Query:  334 GLKVGAFGKERLVYHNDYVVHEDLGFCRY--LAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRMPVDIRVALLRGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVKGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITLE 945
            GL VG  GKER+ Y  DY+VHE++G CRY          ++ E I LEFAD  + + R +S LLTR+RA D+  V LS   +   WLR K KV  +V  QA++VM LYA+RA   R PC PDGPD   FCA F + PT DQ RC++EIE DMVWR+ PMDRLLCGDVGFGKTEVA+RAI+R VRN +QVALLAPTTILAAQHYRTLL R+P D+RV LLRGGNT  +RDIK  +   TVDVVVGTH+LL RKVEF  LGLLV+DEEQKFGV+QKE+LK L+TGVDVLTLTATPIPRTLHMSL+GIRDLS I SPPEGR NVTTYIMK+TD++++RA+ RE+ R GQVF +VPRI+ I+ A  ++++  P A+V VGHSKV+ LE+ VL FTLG GD+L+ATSIIENGIDMPNVNSI++ DSHMFGLSQLYQMRGRVGRS+ AAYTYLLY P   LT +AKRRLKA+RELS LGSG+ELANRDLEIRGAG++FGTDQSGD+  +GYELYMNMLE A+   RGT I  VL+C +D+G      GSVP +Y+  +    A++V+RLRV   + +LV IA++WV  YG +P   R LF H H+  ACR LGV +ITL+
Sbjct:    5 GLPVGPRGKERVAYEGDYLVHENIGVCRYKRAVTSVANGSEWEAIELEFADGVVEVARIDSRLLTRFRAGDSRGVKLSRYADASRWLRAKEKVATKVRAQAVDVMALYARRAGTARAPCAPDGPDYAAFCARFPHAPTPDQARCMEEIEQDMVWRQRPMDRLLCGDVGFGKTEVAMRAIYRAVRNGRQVALLAPTTILAAQHYRTLLARLPSDMRVELLRGGNTRDARDIKVRMAEGTVDVVVGTHTLLGRKVEFSGLGLLVVDEEQKFGVHQKERLKALATGVDVLTLTATPIPRTLHMSLSGIRDLSIIQSPPEGRLNVTTYIMKSTDEVIQRAVARELRRKGQVFFIVPRISDIDAAAARLHKLAPAARVVVGHSKVRDLEERVLNFTLGIGDVLVATSIIENGIDMPNVNSIIIQDSHMFGLSQLYQMRGRVGRSDKAAYTYLLYGPDVRLTADAKRRLKALRELSTLGSGYELANRDLEIRGAGSVFGTDQSGDVGAVGYELYMNMLEAALADARGTSIQAVLKCHIDLGLDLAARGSVPTDYIPLDVV--AQEVDRLRVARGYGDLVDIAQQWVNTYGPLPPAARALFAHHHVLAACRRLGVETITLD 616          
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: A0A7S3XMP5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMP5_HETAK)

HSP 1 Score: 567 bits (1462), Expect = 1.220e-183
Identity = 313/620 (50.48%), Postives = 414/620 (66.77%), Query Frame = 0
Query:  334 GLKVGAFGKERLVYHNDYVVHEDLGFCRY--LAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGT--WLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRMPVDIRVALLRGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVKGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGD-LKDIGYELYMNMLEKAIVSVRGTDITPVLRCEV------DMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSI 942
            G+ VG  G ER VY  D +VH + G CR+     +   DA+ +  +L+FAD  + +   ++ LLTRY++ + A     + +  G   W     K +    K A ++M LYA R    REPC PDG +M  F AGF + PT DQ    + +  DMVWRK PMDRL+CGDVGFGKTEVA+RAI+R VRN +QVALLAPTT+LAAQH RTL +RMP D+ V  LRGGNT  +R  KE +    ++VVVGTH+LL  KV F  LGL+V+DEEQ+FGV QKEKLK  S  VDVLTL+ATPIPRTL MSL+G+RD+S+I++ PEGRQNV+T + +   ++++ AI  E+ R GQVF VVPR+  +E A E + + VP  +VAV H ++KG EDV++QFTLG  D+L+AT+IIENG+D+PNVN+IVV ++ M GLSQLYQ+RGRVGRSN  A+ YLL+  G  LT++A  RL AM+++S LG G E+A RDL+IRGAG+I  T Q G  + + G +LYM +LE+++  +RGT +TP L C V      D   A  L  ++PA Y+  +   R +   R RV ++  ELV IA+EW  AYG  P  V+RL K  HL  A R LGV  I
Sbjct:  112 GMLVGPPGNERTVYEGDLLVHRNHGLCRFEQAVGQRTGDARRKGFLLQFADQQVTLPLGQAELLTRYKSREQAGENPKLAKFTGRRGWSTKLQKAKLHTDKLAKDIMMLYADRDGRYREPCLPDGEEMWAFEAGFHFQPTPDQRTAFEAVMKDMVWRKRPMDRLICGDVGFGKTEVAMRAIYRAVRNGRQVALLAPTTVLAAQHLRTLRRRMP-DVAVECLRGGNTRENRRTKERLAAGELEVVVGTHALLGNKVAFQRLGLVVVDEEQRFGVAQKEKLKAASADVDVLTLSATPIPRTLQMSLSGLRDMSSIYTAPEGRQNVSTTVARMGQEVIREAIQYELDRDGQVFYVVPRVAMVEEAVETLQQLVPGVRVAVCHGQMKGTEDVIVQFTLGSADVLVATTIIENGLDIPNVNTIVVQNADMLGLSQLYQLRGRVGRSNRDAHAYLLHG-GRGLTSDAMMRLAAMKQMSTLGCGREVARRDLDIRGAGSILSTKQKGGGVGEFGLDLYMQVLEESMAELRGTALTPALACAVALPGLPDPDAAAHLGDALPAAYIP-DPAARRQAYNRARVADTREELVAIAEEWNAAYGPPPARVKRLLKVRHLQVAGRTLGVERI 728          
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: B7GBS8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GBS8_PHATC)

HSP 1 Score: 499 bits (1286), Expect = 3.770e-156
Identity = 272/589 (46.18%), Postives = 390/589 (66.21%), Query Frame = 0
Query:  368 LEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVP-LSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDM-EVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRM----PVDIRVALLRGG---NTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVK--GLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGF-ARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITL 944
            L + +   + + +AD  + +  D ++ L+RYRA DA   P LS V+ +  W + K KV+E   + A +V+ LYA R  ++R+P  P   D+ + F   F Y+PTTDQ +C +EIE+DMVWR  PMDRL+CGDVGFGKTEVAIRA+FR + N +Q ALLAPT +LAAQHY+ ++KRM      +I +ALLRGG    T   R+++  I      ++VGTH+LLS +++F NLGLLV+DEEQ+FGV QKE+LK++  G+DVLTL+ATPIPRTL MSL+GIRD STI SPP  R+   T++   ++DI+K AI+ E++RGGQ + VVPRI+ ++ A + I    P  ++   H +++  G E+ V +F  G  D+LLAT++IENG+D+P+VN+IVV +S  FG+S LYQ+RGRVGRS+  A+ Y LY    ++T +A  RL+A+ ELS LGSGF++ANRDLEIRGAG++ GT+QSG    +G++LYM ML+K+I  +RG D+  V R  +           S+P  ++    E R+ +  + R+  S   LV +  EW + YG +P  ++   K  HLH   R LG+  + L
Sbjct:  171 LSNPQTTVLEITYADAVVHVPVDRAYRLSRYRAGDAVVKPKLSRVKGEA-WSKAKQKVEENTLQLAQDVLALYATRETLQRQPFDPSVEDVVQEFSKSFLYEPTTDQKKCFEEIENDMVWRSRPMDRLICGDVGFGKTEVAIRALFRSIINGRQAALLAPTGVLAAQHYKNIVKRMGPGTEYNINIALLRGGMGKQTKAGRELRGEIEGGKTQLIVGTHALLSNEMKFKNLGLLVVDEEQRFGVKQKERLKLICDGIDVLTLSATPIPRTLQMSLSGIRDTSTIRSPPPMRKPTVTHVQDFSEDIVKTAISTELARGGQCYYVVPRISMLDEAEQTIQSLFPGIRIIQAHGRMQRNGAEENVAEFAEGNYDVLLATTVIENGVDIPSVNTIVVQNSQAFGMSTLYQLRGRVGRSDKQAFAYFLYRE-ESITEQAAMRLQAIGELSELGSGFDVANRDLEIRGAGSLLGTEQSGMAAKVGFDLYMRMLKKSIRKLRGLDLPLVPRTNILFPTDGSPSTFSLPMSFIERQSERRSEET-KARLAESTSALVTLTNEWKSKYGSLPSTLQNQLKTLHLHACTRRLGIDLVGL 756          
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: A0A6H1TVP7_9CYAN (Transcription-repair-coupling factor n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1TVP7_9CYAN)

HSP 1 Score: 501 bits (1289), Expect = 3.970e-154
Identity = 270/600 (45.00%), Postives = 399/600 (66.50%), Query Frame = 0
Query:  350 DYVVHEDLGFCRYLAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRM-PVDIRVALLRGGNTLGSR-DIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVKG--LEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITLE 945
            DYVVH   G  R++  E LE+   E + +++AD  L +R D+   L+R+R     R  L+ ++    W + K KV++ + K A++++DLYAKR++ +     PD P  +     F Y PT DQL+  Q+++ DM   + PMDRL+CGDVGFGKTEVAIRAIF+ V   KQVALLAPTTIL  QHY TL +R  P  I+VALL    T   R DI++ +    +DVVVGTHS+L + V+F +LGLLV+DEEQ+FGVNQKEK+K   T VDVLTL+ATPIPRTL+M+++GIR++S I +PP  R+ + T++    ++ ++ AI +E+ RGGQVF VVPRI  I+     + + +P A++A+ H ++    LE +VL F+ G  DIL+ T+IIE+G+D+P VN+I++ D+H FGLSQLYQ+RGRVGR+ + A+ ++ YP    L+++A++RL+A++E S LGSG++LA RD+EIRG GN+ G +QSG +  IG++LYM ML++AI  +RG +I  V   +VD+     +   +P +Y+T  D++      ++   +S +EL +IA +W   YG +P PV++L +   L    + LG S I  E
Sbjct:  504 DYVVHRHHGIGRFIKLEKLENR--EYLAVKYADGLLKVRVDQLDSLSRFRQTGRGRPQLNKLQNNKAWEKTKNKVRKAIKKLAVDLLDLYAKRSKQQGFLYPPDMPWQQELEDSFPYQPTPDQLKATQDVKRDMEGDR-PMDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERFAPYPIQVALLNRFRTAQERRDIQQRLATGELDVVVGTHSILGKTVKFRDLGLLVVDEEQRFGVNQKEKIKSYKTQVDVLTLSATPIPRTLYMAMSGIREMSLITTPPPSRRPIQTHLAPYDEETVRTAIRQELDRGGQVFYVVPRIEGIDELAASLQQTIPSARIAIAHGQMAASELESIVLGFSSGEADILVCTTIIESGLDIPRVNTILIEDAHRFGLSQLYQLRGRVGRAGIQAHAWMFYPKDKVLSDDARKRLRAIQEFSQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDAIGFDLYMEMLQEAIREIRGQEIPQVEETQVDL----PMTAFIPTDYITDLDQKMV-AYRQIASASSRKELTQIAADWSDRYGPLPNPVKQLMQIVELKQIAKPLGFSRIKPE 1095          
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: A0A1E7FE91_9STRA (p-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE91_9STRA)

HSP 1 Score: 479 bits (1232), Expect = 5.290e-153
Identity = 258/572 (45.10%), Postives = 369/572 (64.51%), Query Frame = 0
Query:  378 LEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPD-MEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRMPVD----IRVALLRGG---NTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKV--KGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGV 939
            + +AD  + +  D ++ L+RYRA DAA  P         W   + KV+    + A +V+ LYA R  ++R+P  PD    ++ F   F ++PT+DQ +C +++E+DMVWR  PMDRL+CGDVGFGKTEVAIRA+FR V N +Q A+LAPT +LA+QH++ + KR+  D     RV LLRGG   NT   R+I+  I +   D+++GTH+LLS+ ++F +LGLLV+DEEQ+FGV QKE+LK++  GVDVLTL+ATPIPRTL MSL+GIRD STI +PP  R+   TY+     +++K+AI +E+ RGGQ + VVPRI  I  A E I  C P+  V   H ++     E+ V  F  G  D+LLAT++IENG+D+P VN+I++ DS  FG+S LYQ+RGRVGRS++  Y+Y L+     +T ++  RL+A+ EL+ LGSGF++ANRDLEIRGAG++ GT+QSG    +G++LYM ML+K+I  +RG D+  V R              +P +YM   D+ +  +   +R+  S   LV +   W   YG +P  ++   K  HLH   R LG+
Sbjct:    3 ITYADGIVHVPVDRAYRLSRYRAGDAAVKPRLSKVRGDQWRNARKKVEASTLELAQDVLALYATRETLQRQPFDPDNEGKVKEFEKTFRFEPTSDQNKCFEDVENDMVWRSRPMDRLICGDVGFGKTEVAIRALFRTVTNGRQSAMLAPTGVLASQHFKNICKRVGEDSEYGFRVGLLRGGMTANTKVGREIRGKIEDGHFDIIIGTHALLSKSLKFKDLGLLVVDEEQRFGVKQKERLKLICEGVDVLTLSATPIPRTLQMSLSGIRDTSTIRTPPPMRKATKTYVQSFDKEVIKKAIGKELERGGQCYYVVPRIAMIAEAEETIRECFPDITVIQAHGRMGRNKAEENVSTFAEGGIDVLLATTVIENGVDIPTVNTIIIQDSQNFGMSTLYQLRGRVGRSDLQGYSYFLHNEDK-VTEQSVMRLQAIGELNELGSGFDVANRDLEIRGAGSLLGTEQSGAAARVGFDLYMRMLKKSIRQLRGLDLPLVPRTNESGKIVSVHAFQIPEDYMPDADQRQIAET-AVRLSESSARLVELTNVWKDEYGPLPATLQAKLKIMHLHACTRRLGI 572          
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: B7JVA1_RIPO1 (Transcription-repair-coupling factor n=1 Tax=Rippkaea orientalis (strain PCC 8801) TaxID=41431 RepID=B7JVA1_RIPO1)

HSP 1 Score: 494 bits (1273), Expect = 6.540e-152
Identity = 276/602 (45.85%), Postives = 396/602 (65.78%), Query Frame = 0
Query:  350 DYVVHEDLGFCRYLAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGT-WLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRN-KKQVALLAPTTILAAQHYRTLLKRM-PVDIRVALL-RGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSK--VKGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITLE 945
            DYV+H++ G  ++L  E L  A  E +++++ D  L +  D    L+RYR   +   P  + +  G  W + K +V++ + K A+++++LYAKRA+ E     PD P  E     F Y PT DQL+ +Q+++ D+   + PMDRL+CGDVGFGKTEVA+RAIF+ V +  KQVALLAPTTIL  QHY TL +R  P  I + LL R   T   +DI + +    +D+VVGTH LL + V+F NLGLLVIDEEQ+FGVNQKEK+KVL T VDVLTLTATPIPRTL+MSL+GIR++S I +PP  R+ + T++     D+++ AI  E+ RGGQ+F VVPR+  IE    QI + VP A++ + H +  V  LE  +L F  G  DIL+ T+IIE+G+D+P VN+I+V D+  FGLSQLYQ+RGRVGRS + A+ +LLYP    L+  A++RL+A++E S LGSG++LA RD+EIRG GN+ G +QSG +  IG+ELYM ML++AI  ++G +I  V   ++D+    +L   +P++Y+  + +++     R+ + NS  +L  I K+W   YG +P PVR+L +   L    + LG S I +E
Sbjct:  494 DYVIHKNHGLGKFLKLESL--ATREYLVIQYEDGLLRVPADSFDSLSRYRHTGSH--PPELHKMTGKIWEKTKQRVRKSIKKLAVDLLNLYAKRAKKEGFIYPPDTPWQEELEDSFPYQPTPDQLKAVQDVKMDLESDR-PMDRLVCGDVGFGKTEVAVRAIFKAVTSGHKQVALLAPTTILTQQHYHTLKERFAPYPINIGLLNRFRTTSEKKDIVQRLATGELDIVVGTHQLLGQSVKFKNLGLLVIDEEQRFGVNQKEKIKVLKTEVDVLTLTATPIPRTLYMSLSGIREISLITTPPPSRRPIKTHLSSYNPDVVRTAIRNELDRGGQIFYVVPRVEGIEEVAGQIQQMVPSARIVIAHGQMDVNDLEMTMLGFNNGEADILVCTTIIESGLDIPRVNTIIVEDAQKFGLSQLYQLRGRVGRSGIQAHAWLLYPNKGQLSETARQRLRALQEFSQLGSGYQLATRDMEIRGVGNLLGAEQSGQMMAIGFELYMEMLQEAIKEIQGQEIPKVDETQIDL----QLTAFIPSDYIP-DLQQKMDAYRRIAMANSKEQLEEIVKDWTDRYGTIPSPVRQLLQVIELKQIGKSLGFSRIKVE 1085          
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: UPI001FF4BB70 (transcription-repair coupling factor n=1 Tax=Synechococcus sp. C9 TaxID=102119 RepID=UPI001FF4BB70)

HSP 1 Score: 493 bits (1268), Expect = 1.720e-151
Identity = 272/599 (45.41%), Postives = 398/599 (66.44%), Query Frame = 0
Query:  350 DYVVHEDLGFCRYLAPEFLE-DAKAEE-IMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRM-PVDIRVALL-RGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKV--KGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSI 942
            DYV+H   G  ++L  + LE D +  E ++L++AD  L +  D+   L+RYR     +  L  +  + TW + + KV++ + K A+N+++LYAKRA   R P  PD P  +     F Y  T DQ + +Q +++D+   + PMDRL+CGDVGFGKTEVAIRAIF+++   +QVALLAPTT+LA QHY TL +R  P  I++ALL R  +    + I   ++   +D VVGTH LLS  V F +LGLLV+DEEQ+FGVN KEK+K L T VDVLTLTATPIPRTL M+L+G+R++S I +PP  R+ + T+++    + ++ AI +E+ RGGQVF V+P+I  +E A  QI + +P AK+ + H ++  + LE  +L F+ G  DIL+ T+I+E+G+D+P VN+I++ D+H FGL+QLYQ+RGRVGR+ V AY +L YP    LT EAK RL+A++E +HLGSG++LA RDL+IRGAG+I G +QSG +  +G++LY+ ML++AI  VRG +I  V   ++D+     L   +PA YM  N E++      L    + +EL +IA+EWV +YGE+P+PV +L     +    + LG+S I
Sbjct:  467 DYVIHRHHGCGQFLRLDKLEIDGQIREYLVLQYADGLLQVAVDQVGSLSRYRGGGTQKPELHRLANK-TWEKTREKVRKSLKKLAVNLLELYAKRAEQTRTPYSPDSPWQKELEDSFPYALTPDQAKAIQAVKADLEAPR-PMDRLVCGDVGFGKTEVAIRAIFKVLLAGRQVALLAPTTVLAQQHYHTLKERFAPYPIQIALLNRFRSPQERKQILAKLKTGELDCVVGTHQLLSNTVTFRDLGLLVVDEEQRFGVNHKEKIKALKTTVDVLTLTATPIPRTLSMALSGLREMSLITTPPPSRRPIKTHLIPYQPETIRAAIAQELDRGGQVFYVLPKIAGMEAAIAQIQQMIPTAKIMLAHGQLAPEELEVAMLAFSNGEADILVCTTIVESGLDIPRVNTIIIEDAHRFGLAQLYQLRGRVGRAGVQAYAWLTYPSEELLTEEAKARLRAIQEFTHLGSGYQLALRDLDIRGAGDILGAEQSGQVAAVGFDLYLEMLQEAIQEVRGQEIPSVDDTQIDLN----LTAFIPANYMP-NLEQKLSAYRTLATAETPQELTKIAQEWVNSYGELPVPVVQLILVMRVKLLAKQLGISRI 1058          
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: UPI001A0F713F (Transcription-repair coupling factor n=1 Tax=Thermoleptolyngbya sp. M55_K2018_002 TaxID=2747808 RepID=UPI001A0F713F)

HSP 1 Score: 482 bits (1241), Expect = 2.270e-151
Identity = 266/599 (44.41%), Postives = 391/599 (65.28%), Query Frame = 0
Query:  350 DYVVHEDLGFCRYLAPEFL--EDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRM-PVDIRVALLRGGNTLGSR-DIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVKG--LEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSI 942
            DYVVH++ G  +++  E L  ++   E ++L++AD  L +  D+ + L+R+R     +  LS +  +  W R K KV++ + K A +++ LYA+RA+ +     PD P  E     F Y PTTDQL+ +Q+++ DM   + PMDRL+CGDVGFGKTEVAIRAIF+ +   KQVALLAPTTIL  QHY TL +R  P  I+V LL    T   + DI + + +  +DVVVGTH LL + V+F +LGLLV+DEEQ+FGVNQKEK+K L T VDVLTL+ATPIPRTL+M+L+G+R++S I +PP  R+ + T++     ++++ AI +E+ RGGQVF VVPR+  IE    +I   VP  ++A+ H +++   LE  +L F  G  DIL+ T+IIE+G+D+P VN+I++ D+  FGLSQLYQ+RGRVGR+ + A+ +L YP    LT  A++RL+A++E + LGSG++LA RD+EIRG GN+ G +QSG +  IG++LYM MLE+AI  +RG +I  V   ++D+     L   +PA+Y+   D++ +     +    + +EL  IA +W   YG +P    +LF+   L    + LG S I
Sbjct:  127 DYVVHKNHGIGQFIKLESLTLDNETREYLVLKYADGLLRVAADQVNALSRFRGVGEGKPELSKMTGKA-WERTKQKVRKAIKKVAFDLLQLYAQRAQQQGHAYPPDTPWQEEMEDSFPYQPTTDQLKAIQDVKRDMEGDR-PMDRLVCGDVGFGKTEVAIRAIFKAITAGKQVALLAPTTILTQQHYHTLKERFAPYPIQVGLLNRFRTNAEKQDILKRLASGELDVVVGTHQLLGKGVQFKDLGLLVVDEEQRFGVNQKEKIKTLKTQVDVLTLSATPIPRTLYMALSGVREMSLITTPPPSRRPIKTHLSPYDPEMVRTAIRQELDRGGQVFYVVPRVEGIEETAAKIREMVPGVRMAIAHGQMQEGELEATMLTFNNGEADILVCTTIIESGLDIPRVNTILIEDAQKFGLSQLYQLRGRVGRAGIQAHAWLFYPKQSQLTETARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDAIGFDLYMEMLEEAIKEIRGQEIPQVDDTQIDL----RLTAFIPADYIPDLDQKMS-AYRAVAAAQTKQELTEIAVDWSDRYGPIPPAALQLFRVVELKQIAKKLGFSRI 718          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUP0_9PHAE0.000e+071.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDP5_ECTSI0.000e+073.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YLF5_9STRA3.180e-26263.84P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3XMP5_HETAK1.220e-18350.48Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B7GBS8_PHATC3.770e-15646.18Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6H1TVP7_9CYAN3.970e-15445.00Transcription-repair-coupling factor n=3 Tax=Cyano... [more]
A0A1E7FE91_9STRA5.290e-15345.10p-loop containing nucleoside triphosphate hydrolas... [more]
B7JVA1_RIPO16.540e-15245.85Transcription-repair-coupling factor n=1 Tax=Rippk... [more]
UPI001FF4BB701.720e-15145.41transcription-repair coupling factor n=1 Tax=Synec... [more]
UPI001A0F713F2.270e-15144.41Transcription-repair coupling factor n=1 Tax=Therm... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003711CarD-like/TRCF domainSMARTSM01058CarD_TRCF_2coord: 349..440
e-value: 0.001
score: 6.2
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 686..771
e-value: 5.8E-13
score: 59.1
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 666..770
e-value: 9.6E-13
score: 48.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 651..815
score: 12.909
IPR005118Transcription-repair-coupling factor, C-terminal domainSMARTSM00982TRCF_a_2_acoord: 868..962
e-value: 0.0088
score: -12.9
IPR005118Transcription-repair-coupling factor, C-terminal domainPFAMPF03461TRCFcoord: 873..944
e-value: 1.3E-5
score: 25.5
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 464..652
e-value: 2.8E-30
score: 116.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 483..642
score: 18.155
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 490..625
e-value: 7.4E-15
score: 55.2
IPR037235TRCF-like, C-terminal domainGENE3D3.90.1150.50coord: 869..950
e-value: 1.5E-5
score: 27.3
IPR037235TRCF-like, C-terminal domainSUPERFAMILY143517TRCF domain-likecoord: 871..944
NoneNo IPR availableGENE3D3.40.50.300coord: 348..849
e-value: 1.0E-183
score: 613.6
NoneNo IPR availableGENE3D3.40.50.300coord: 405..644
e-value: 1.0E-183
score: 613.6
NoneNo IPR availablePANTHERPTHR14025FAMILY NOT NAMEDcoord: 312..945
NoneNo IPR availablePANTHERPTHR14025:SF29TRANSCRIPTION-REPAIR-COUPLING FACTORcoord: 312..945
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..32
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..1167
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.591
IPR036101CarD-like/TRCF domain superfamilyGENE3D2.30.30.840coord: 349..404
e-value: 1.0E-183
score: 613.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 422..646
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 645..847

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig740contigF-serratus_M_contig740:217849..236497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig740.18661.1mRNA_F-serratus_M_contig740.18661.1Fucus serratus malemRNAF-serratus_M_contig740 217802..236833 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig740.18661.1 ID=prot_F-serratus_M_contig740.18661.1|Name=mRNA_F-serratus_M_contig740.18661.1|organism=Fucus serratus male|type=polypeptide|length=1168bp
MNSITILLPSLCWIMRSGTGFVVQLHGGPGLASGTTRASDEHHDQRQSWT
SHRFSAAYKHLRFDSRPDRLRSKLYGSYSSPLAAEGATRSHRRPFVQLRH
ADSATRLVWETAAPAAPAIHRRTRLPRAKIHLYAVAGGGGGAEVTSDTPS
SKPKRRGRPPKSSVNTSEQKAKVIATAKRMAASVATTAPAREATKGATVA
TSTEGVNEGTRRVEDEGGQVVETVGIGDSIAVGDDEASVAFESITRSTTV
GEDIPWKGAAPFPSGEPDVEEKAGEDEEAGGERSPPRTKARKKSLGGKGS
KARASDGDEGLSTGEMEREETRQDKQAAAIQRQGLKVGAFGKERLVYHND
YVVHEDLGFCRYLAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRA
ADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPC
RPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGF
GKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRMPVDIRVALL
RGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKF
GVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQ
NVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVP
EAKVAVGHSKVKGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVM
DSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMREL
SHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSV
RGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSF
RELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITLEYLPNS
EPSSPVATATSAGADEDPKGWAAGPPKNPFASALKHPLSSAAAAGDASTP
SGTPPGGVREAGEGQQAQFQEAGRRNGWVGSPADARGRRTAAGRKAGGGG
EGDTSVTAVTATAGAVAATEEVPFAVMRGADVEQERWEILLRQGPLGQDS
LRHVCFRHDAGGVVLRGVSGKEEAWLRGEREEWLDHLLSVLLPLVEYVET
KQSLQLTMTPPTRNHVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003711CarD-like/TRCF_domain
IPR001650Helicase_C
IPR005118TRCF_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR037235TRCF-like_C
IPR036101CarD-like/TRCF_dom_sf
IPR027417P-loop_NTPase