mRNA_F-serratus_M_contig740.18661.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: A0A6H5JUP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUP0_9PHAE) HSP 1 Score: 1180 bits (3053), Expect = 0.000e+0 Identity = 624/878 (71.07%), Postives = 690/878 (78.59%), Query Frame = 3
Query: 1011 RQDKQAAAIQRQGLKVGAFGKERLVYHNDYVVHEDLGFCRYLAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRMPVDIRVALLRGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVKGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITLEYLPNSEPSSPVATATSAGADEDPKG---WAAGPPKNPFASALKHPLSSAAAAGDASTPSGTPPGGVREAGEGQQAQFQEAG-------------------------------RRNGWVGSPADARGRRTAAGRKAGGGGEGDTSVTAVTATAGAVAATEEVPFAVMRGADVEQERWEILLRQGPLGQDSLRHVCFRHDAGGVVLRGVSGKEEAWLRGEREEWLDHLLSVLLPLVEYVETKQSLQL--TMTPPTR 3536
RQD +A IQ+QGLKVGAFGKER+VYH+DY+VHEDLGFCRYLAPEF DA +EI+LEF+D NLPI +D+S+LLTRYRAADAARVPLSVV +Q +WLRHKLKVQERVTKQA+NVMDLYAKRAR+ER+PC+PDGP+M+ FC GF++ PT DQLRCL EIE+DM+WRK+PMDRLLCGDVGFGKTEVA+RA+FRMVR+ KQVALLAPTTILAAQHYRTLLKRMP D+ VALLRGGN++GSR IKEAIRN TV VVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVL+TGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPP RQNVTTYIMK TD+I++RA+TREMSRGGQVF VVPRINQIE AW QI+RCVP A+VAVGHSK+K LEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVV DSHMFGLSQLYQMRGRVGRS+VAAYTYLLYPPGH L+NEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDI PVLRCEVDMGF EL+GSVPA+YMTC+DEER RQ++RLRVCNSFRELVRIAKEWV +Y EMP+ VRRLFKHTHL+TACRLLG+SS++LE+LP + S A A G + G W K P L+ A E AQ +EA GG GD + VPFAVMRG +VEQERWEIL RQGPL L+ + FR D GGV LRGV+G+EEAWL+G+REEWLDHLLSVLLPLVEYVETKQSLQ+ T PP +
Sbjct: 331 RQDALSANIQKQGLKVGAFGKERIVYHHDYMVHEDLGFCRYLAPEFTPDANPDEILLEFSDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVNVALLRGGNSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQVFYVVPRINQIEDAWLQISRCVPNARVAVGHSKIKNLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVQDSHMFGLSQLYQMRGRVGRSDVAAYTYLLYPPGHQLSNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDIQPVLRCEVDMGFGDELKGSVPADYMTCDDEERERQIDRLRVCNSFRELVRIAKEWVNSYSEMPVAVRRLFKHTHLNTACRLLGISSLSLEFLPERDASLGEADAAGEGGGDAVNGGAGWTGAGAKKPMVEDLE------------------------AARESHAAQDREASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGGVKSGDP--------------VKLVPFAVMRGPEVEQERWEILFRQGPLEYSQLQRMSFRGDVGGVALRGVAGEEEAWLKGDREEWLDHLLSVLLPLVEYVETKQSLQMKSTRAPPPK 1170
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: D8LDP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDP5_ECTSI) HSP 1 Score: 1155 bits (2987), Expect = 0.000e+0 Identity = 611/830 (73.61%), Postives = 674/830 (81.20%), Query Frame = 3
Query: 1101 VVHEDLGFCRYLAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRMPVDIRVALLRGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVKGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITLEYLPNSEPSSPVATATSAGADEDPKG---WAAGPPKNPFASALKHPLSSAAAAGDASTPSGTPPGGVREAGEGQQAQFQEAGRRNGWVGSPADARGRRTAAGRKAGGGGEGDTSVTAVTATA----------GAVAATEEV---PFAVMRGADVEQERWEILLRQGPLGQDSLRHVCFRHDAGGVVLRGVSGKEEAWLRGEREEWLDHLLSVLLPLVEYVETKQSLQL--TMTPPTR 3536
+VHEDLGFCRYLAPEF DA EEI+LEF+D NLPI +D+S+LLTRYRAADAARVPLSVV +Q +WLRHKLKVQERVTKQA+NVMDLYAKRAR+ER+PC+PDGP+M+ FC GF++ PT DQLRCL EIE+DM+WRK+PMDRLLCGDVGFGKTEVA+RA+FRMVR+ KQVALLAPTTILAAQHYRTLLKRMP D+ VALLRGGN++GSR IKEAIRN TV VVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVL+TGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPP RQNVTTYIMK TD+I++RA+TREMSRGGQVF VVPRINQIE AW QI+RCVP A+VAVGHSK+K LEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVV DSHMFGLSQLYQMRGRVGRS+VAAYTYLLYPPGH L+NEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDI PVLRCEVDMGF EL+GSVPA+YMTC+DEER RQ++RLRVCNSFRELVRIAKEWV +Y EMP+ VRRLFKHTHL+TACRLLG+SS++LE+LP + S A A G + G W + P L+ S AA R AG G + T GR +GGG V AV A G V + E V PFAVMRG +VEQERWEIL RQGPL L+ + FR D GGV LRGV+G+EEAWL+G+REEWLDHLLSVLLPLVEYVETKQSLQ+ T PP +
Sbjct: 1 MVHEDLGFCRYLAPEFTPDANPEEILLEFSDMNLPIAKDQSYLLTRYRAADAARVPLSVVSDQNSWLRHKLKVQERVTKQAVNVMDLYAKRARVERDPCKPDGPEMDEFCKGFDHQPTKDQLRCLTEIENDMIWRKIPMDRLLCGDVGFGKTEVALRAMFRMVRHNKQVALLAPTTILAAQHYRTLLKRMPADVNVALLRGGNSMGSRGIKEAIRNETVRVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLTTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPANRQNVTTYIMKGTDEIVQRALTREMSRGGQVFYVVPRINQIEDAWLQISRCVPNARVAVGHSKIKNLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVQDSHMFGLSQLYQMRGRVGRSDVAAYTYLLYPPGHQLSNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDIQPVLRCEVDMGFGAELKGSVPADYMTCDDEERERQIDRLRVCNSFRELVRIAKEWVNSYSEMPVAVRRLFKHTHLNTACRLLGISSLSLEFLPERDASLGEADAAGEGGGDAVNGGVGWTGAGARKPMVEDLEAARESHAAQD-------------RAAGVGGDSXXXXXXXXXXXXXXXXXV---ATVNGRPSGGG--TPKQVVAVDAAXXXXXXPAPAPGGVKSGEPVKLVPFAVMRGPEVEQERWEILFRQGPLEYSQLQRISFRGDVGGVALRGVAGEEEAWLKGDREEWLDHLLSVLLPLVEYVETKQSLQMKSTRAPPPK 812
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: A0A835YLF5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLF5_9STRA) HSP 1 Score: 765 bits (1976), Expect = 1.500e-260 Identity = 392/614 (63.84%), Postives = 472/614 (76.87%), Query Frame = 3
Query: 1047 GLKVGAFGKERLVYHNDYVVHEDLGFCRY--LAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRMPVDIRVALLRGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVKGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITLE 2882
GL VG GKER+ Y DY+VHE++G CRY ++ E I LEFAD + + R +S LLTR+RA D+ V LS + WLR K KV +V QA++VM LYA+RA R PC PDGPD FCA F + PT DQ RC++EIE DMVWR+ PMDRLLCGDVGFGKTEVA+RAI+R VRN +QVALLAPTTILAAQHYRTLL R+P D+RV LLRGGNT +RDIK + TVDVVVGTH+LL RKVEF LGLLV+DEEQKFGV+QKE+LK L+TGVDVLTLTATPIPRTLHMSL+GIRDLS I SPPEGR NVTTYIMK+TD++++RA+ RE+ R GQVF +VPRI+ I+ A ++++ P A+V VGHSKV+ LE+ VL FTLG GD+L+ATSIIENGIDMPNVNSI++ DSHMFGLSQLYQMRGRVGRS+ AAYTYLLY P LT +AKRRLKA+RELS LGSG+ELANRDLEIRGAG++FGTDQSGD+ +GYELYMNMLE A+ RGT I VL+C +D+G GSVP +Y+ + A++V+RLRV + +LV IA++WV YG +P R LF H H+ ACR LGV +ITL+
Sbjct: 5 GLPVGPRGKERVAYEGDYLVHENIGVCRYKRAVTSVANGSEWEAIELEFADGVVEVARIDSRLLTRFRAGDSRGVKLSRYADASRWLRAKEKVATKVRAQAVDVMALYARRAGTARAPCAPDGPDYAAFCARFPHAPTPDQARCMEEIEQDMVWRQRPMDRLLCGDVGFGKTEVAMRAIYRAVRNGRQVALLAPTTILAAQHYRTLLARLPSDMRVELLRGGNTRDARDIKVRMAEGTVDVVVGTHTLLGRKVEFSGLGLLVVDEEQKFGVHQKERLKALATGVDVLTLTATPIPRTLHMSLSGIRDLSIIQSPPEGRLNVTTYIMKSTDEVIQRAVARELRRKGQVFFIVPRISDIDAAAARLHKLAPAARVVVGHSKVRDLEERVLNFTLGIGDVLVATSIIENGIDMPNVNSIIIQDSHMFGLSQLYQMRGRVGRSDKAAYTYLLYGPDVRLTADAKRRLKALRELSTLGSGYELANRDLEIRGAGSVFGTDQSGDVGAVGYELYMNMLEAALADARGTSIQAVLKCHIDLGLDLAARGSVPTDYIPLDVV--AQEVDRLRVARGYGDLVDIAQQWVNTYGPLPPAARALFAHHHVLAACRRLGVETITLD 616
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: A0A7S3XMP5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMP5_HETAK) HSP 1 Score: 567 bits (1462), Expect = 3.070e-182 Identity = 313/620 (50.48%), Postives = 414/620 (66.77%), Query Frame = 3
Query: 1047 GLKVGAFGKERLVYHNDYVVHEDLGFCRY--LAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGT--WLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRMPVDIRVALLRGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVKGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGD-LKDIGYELYMNMLEKAIVSVRGTDITPVLRCEV------DMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSI 2873
G+ VG G ER VY D +VH + G CR+ + DA+ + +L+FAD + + ++ LLTRY++ + A + + G W K + K A ++M LYA R REPC PDG +M F AGF + PT DQ + + DMVWRK PMDRL+CGDVGFGKTEVA+RAI+R VRN +QVALLAPTT+LAAQH RTL +RMP D+ V LRGGNT +R KE + ++VVVGTH+LL KV F LGL+V+DEEQ+FGV QKEKLK S VDVLTL+ATPIPRTL MSL+G+RD+S+I++ PEGRQNV+T + + ++++ AI E+ R GQVF VVPR+ +E A E + + VP +VAV H ++KG EDV++QFTLG D+L+AT+IIENG+D+PNVN+IVV ++ M GLSQLYQ+RGRVGRSN A+ YLL+ G LT++A RL AM+++S LG G E+A RDL+IRGAG+I T Q G + + G +LYM +LE+++ +RGT +TP L C V D A L ++PA Y+ + R + R RV ++ ELV IA+EW AYG P V+RL K HL A R LGV I
Sbjct: 112 GMLVGPPGNERTVYEGDLLVHRNHGLCRFEQAVGQRTGDARRKGFLLQFADQQVTLPLGQAELLTRYKSREQAGENPKLAKFTGRRGWSTKLQKAKLHTDKLAKDIMMLYADRDGRYREPCLPDGEEMWAFEAGFHFQPTPDQRTAFEAVMKDMVWRKRPMDRLICGDVGFGKTEVAMRAIYRAVRNGRQVALLAPTTVLAAQHLRTLRRRMP-DVAVECLRGGNTRENRRTKERLAAGELEVVVGTHALLGNKVAFQRLGLVVVDEEQRFGVAQKEKLKAASADVDVLTLSATPIPRTLQMSLSGLRDMSSIYTAPEGRQNVSTTVARMGQEVIREAIQYELDRDGQVFYVVPRVAMVEEAVETLQQLVPGVRVAVCHGQMKGTEDVIVQFTLGSADVLVATTIIENGLDIPNVNTIVVQNADMLGLSQLYQLRGRVGRSNRDAHAYLLHG-GRGLTSDAMMRLAAMKQMSTLGCGREVARRDLDIRGAGSILSTKQKGGGVGEFGLDLYMQVLEESMAELRGTALTPALACAVALPGLPDPDAAAHLGDALPAAYIP-DPAARRQAYNRARVADTREELVAIAEEWNAAYGPPPARVKRLLKVRHLQVAGRTLGVERI 728
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: B7GBS8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GBS8_PHATC) HSP 1 Score: 499 bits (1286), Expect = 6.820e-155 Identity = 272/589 (46.18%), Postives = 390/589 (66.21%), Query Frame = 3
Query: 1149 LEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVP-LSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDM-EVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRM----PVDIRVALLRGG---NTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVK--GLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGF-ARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITL 2879
L + + + + +AD + + D ++ L+RYRA DA P LS V+ + W + K KV+E + A +V+ LYA R ++R+P P D+ + F F Y+PTTDQ +C +EIE+DMVWR PMDRL+CGDVGFGKTEVAIRA+FR + N +Q ALLAPT +LAAQHY+ ++KRM +I +ALLRGG T R+++ I ++VGTH+LLS +++F NLGLLV+DEEQ+FGV QKE+LK++ G+DVLTL+ATPIPRTL MSL+GIRD STI SPP R+ T++ ++DI+K AI+ E++RGGQ + VVPRI+ ++ A + I P ++ H +++ G E+ V +F G D+LLAT++IENG+D+P+VN+IVV +S FG+S LYQ+RGRVGRS+ A+ Y LY ++T +A RL+A+ ELS LGSGF++ANRDLEIRGAG++ GT+QSG +G++LYM ML+K+I +RG D+ V R + S+P ++ E R+ + + R+ S LV + EW + YG +P ++ K HLH R LG+ + L
Sbjct: 171 LSNPQTTVLEITYADAVVHVPVDRAYRLSRYRAGDAVVKPKLSRVKGEA-WSKAKQKVEENTLQLAQDVLALYATRETLQRQPFDPSVEDVVQEFSKSFLYEPTTDQKKCFEEIENDMVWRSRPMDRLICGDVGFGKTEVAIRALFRSIINGRQAALLAPTGVLAAQHYKNIVKRMGPGTEYNINIALLRGGMGKQTKAGRELRGEIEGGKTQLIVGTHALLSNEMKFKNLGLLVVDEEQRFGVKQKERLKLICDGIDVLTLSATPIPRTLQMSLSGIRDTSTIRSPPPMRKPTVTHVQDFSEDIVKTAISTELARGGQCYYVVPRISMLDEAEQTIQSLFPGIRIIQAHGRMQRNGAEENVAEFAEGNYDVLLATTVIENGVDIPSVNTIVVQNSQAFGMSTLYQLRGRVGRSDKQAFAYFLYRE-ESITEQAAMRLQAIGELSELGSGFDVANRDLEIRGAGSLLGTEQSGMAAKVGFDLYMRMLKKSIRKLRGLDLPLVPRTNILFPTDGSPSTFSLPMSFIERQSERRSEET-KARLAESTSALVTLTNEWKSKYGSLPSTLQNQLKTLHLHACTRRLGIDLVGL 756
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: A0A6H1TVP7_9CYAN (Transcription-repair-coupling factor n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1TVP7_9CYAN) HSP 1 Score: 501 bits (1289), Expect = 7.230e-153 Identity = 270/600 (45.00%), Postives = 399/600 (66.50%), Query Frame = 3
Query: 1095 DYVVHEDLGFCRYLAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRM-PVDIRVALLRGGNTLGSR-DIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVKG--LEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITLE 2882
DYVVH G R++ E LE+ E + +++AD L +R D+ L+R+R R L+ ++ W + K KV++ + K A++++DLYAKR++ + PD P + F Y PT DQL+ Q+++ DM + PMDRL+CGDVGFGKTEVAIRAIF+ V KQVALLAPTTIL QHY TL +R P I+VALL T R DI++ + +DVVVGTHS+L + V+F +LGLLV+DEEQ+FGVNQKEK+K T VDVLTL+ATPIPRTL+M+++GIR++S I +PP R+ + T++ ++ ++ AI +E+ RGGQVF VVPRI I+ + + +P A++A+ H ++ LE +VL F+ G DIL+ T+IIE+G+D+P VN+I++ D+H FGLSQLYQ+RGRVGR+ + A+ ++ YP L+++A++RL+A++E S LGSG++LA RD+EIRG GN+ G +QSG + IG++LYM ML++AI +RG +I V +VD+ + +P +Y+T D++ ++ +S +EL +IA +W YG +P PV++L + L + LG S I E
Sbjct: 504 DYVVHRHHGIGRFIKLEKLENR--EYLAVKYADGLLKVRVDQLDSLSRFRQTGRGRPQLNKLQNNKAWEKTKNKVRKAIKKLAVDLLDLYAKRSKQQGFLYPPDMPWQQELEDSFPYQPTPDQLKATQDVKRDMEGDR-PMDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERFAPYPIQVALLNRFRTAQERRDIQQRLATGELDVVVGTHSILGKTVKFRDLGLLVVDEEQRFGVNQKEKIKSYKTQVDVLTLSATPIPRTLYMAMSGIREMSLITTPPPSRRPIQTHLAPYDEETVRTAIRQELDRGGQVFYVVPRIEGIDELAASLQQTIPSARIAIAHGQMAASELESIVLGFSSGEADILVCTTIIESGLDIPRVNTILIEDAHRFGLSQLYQLRGRVGRAGIQAHAWMFYPKDKVLSDDARKRLRAIQEFSQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDAIGFDLYMEMLQEAIREIRGQEIPQVEETQVDL----PMTAFIPTDYITDLDQKMV-AYRQIASASSRKELTQIAADWSDRYGPLPNPVKQLMQIVELKQIAKPLGFSRIKPE 1095
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: A0A1E7FE91_9STRA (p-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE91_9STRA) HSP 1 Score: 479 bits (1232), Expect = 8.490e-152 Identity = 258/572 (45.10%), Postives = 369/572 (64.51%), Query Frame = 3
Query: 1179 LEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPD-MEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRMPVD----IRVALLRGG---NTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKV--KGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGV 2864
+ +AD + + D ++ L+RYRA DAA P W + KV+ + A +V+ LYA R ++R+P PD ++ F F ++PT+DQ +C +++E+DMVWR PMDRL+CGDVGFGKTEVAIRA+FR V N +Q A+LAPT +LA+QH++ + KR+ D RV LLRGG NT R+I+ I + D+++GTH+LLS+ ++F +LGLLV+DEEQ+FGV QKE+LK++ GVDVLTL+ATPIPRTL MSL+GIRD STI +PP R+ TY+ +++K+AI +E+ RGGQ + VVPRI I A E I C P+ V H ++ E+ V F G D+LLAT++IENG+D+P VN+I++ DS FG+S LYQ+RGRVGRS++ Y+Y L+ +T ++ RL+A+ EL+ LGSGF++ANRDLEIRGAG++ GT+QSG +G++LYM ML+K+I +RG D+ V R +P +YM D+ + + +R+ S LV + W YG +P ++ K HLH R LG+
Sbjct: 3 ITYADGIVHVPVDRAYRLSRYRAGDAAVKPRLSKVRGDQWRNARKKVEASTLELAQDVLALYATRETLQRQPFDPDNEGKVKEFEKTFRFEPTSDQNKCFEDVENDMVWRSRPMDRLICGDVGFGKTEVAIRALFRTVTNGRQSAMLAPTGVLASQHFKNICKRVGEDSEYGFRVGLLRGGMTANTKVGREIRGKIEDGHFDIIIGTHALLSKSLKFKDLGLLVVDEEQRFGVKQKERLKLICEGVDVLTLSATPIPRTLQMSLSGIRDTSTIRTPPPMRKATKTYVQSFDKEVIKKAIGKELERGGQCYYVVPRIAMIAEAEETIRECFPDITVIQAHGRMGRNKAEENVSTFAEGGIDVLLATTVIENGVDIPTVNTIIIQDSQNFGMSTLYQLRGRVGRSDLQGYSYFLHNEDK-VTEQSVMRLQAIGELNELGSGFDVANRDLEIRGAGSLLGTEQSGAAARVGFDLYMRMLKKSIRQLRGLDLPLVPRTNESGKIVSVHAFQIPEDYMPDADQRQIAET-AVRLSESSARLVELTNVWKDEYGPLPATLQAKLKIMHLHACTRRLGI 572
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: B7JVA1_RIPO1 (Transcription-repair-coupling factor n=1 Tax=Rippkaea orientalis (strain PCC 8801) TaxID=41431 RepID=B7JVA1_RIPO1) HSP 1 Score: 494 bits (1273), Expect = 1.150e-150 Identity = 276/602 (45.85%), Postives = 396/602 (65.78%), Query Frame = 3
Query: 1095 DYVVHEDLGFCRYLAPEFLEDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGT-WLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRN-KKQVALLAPTTILAAQHYRTLLKRM-PVDIRVALL-RGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSK--VKGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSITLE 2882
DYV+H++ G ++L E L A E +++++ D L + D L+RYR + P + + G W + K +V++ + K A+++++LYAKRA+ E PD P E F Y PT DQL+ +Q+++ D+ + PMDRL+CGDVGFGKTEVA+RAIF+ V + KQVALLAPTTIL QHY TL +R P I + LL R T +DI + + +D+VVGTH LL + V+F NLGLLVIDEEQ+FGVNQKEK+KVL T VDVLTLTATPIPRTL+MSL+GIR++S I +PP R+ + T++ D+++ AI E+ RGGQ+F VVPR+ IE QI + VP A++ + H + V LE +L F G DIL+ T+IIE+G+D+P VN+I+V D+ FGLSQLYQ+RGRVGRS + A+ +LLYP L+ A++RL+A++E S LGSG++LA RD+EIRG GN+ G +QSG + IG+ELYM ML++AI ++G +I V ++D+ +L +P++Y+ + +++ R+ + NS +L I K+W YG +P PVR+L + L + LG S I +E
Sbjct: 494 DYVIHKNHGLGKFLKLESL--ATREYLVIQYEDGLLRVPADSFDSLSRYRHTGSH--PPELHKMTGKIWEKTKQRVRKSIKKLAVDLLNLYAKRAKKEGFIYPPDTPWQEELEDSFPYQPTPDQLKAVQDVKMDLESDR-PMDRLVCGDVGFGKTEVAVRAIFKAVTSGHKQVALLAPTTILTQQHYHTLKERFAPYPINIGLLNRFRTTSEKKDIVQRLATGELDIVVGTHQLLGQSVKFKNLGLLVIDEEQRFGVNQKEKIKVLKTEVDVLTLTATPIPRTLYMSLSGIREISLITTPPPSRRPIKTHLSSYNPDVVRTAIRNELDRGGQIFYVVPRVEGIEEVAGQIQQMVPSARIVIAHGQMDVNDLEMTMLGFNNGEADILVCTTIIESGLDIPRVNTIIVEDAQKFGLSQLYQLRGRVGRSGIQAHAWLLYPNKGQLSETARQRLRALQEFSQLGSGYQLATRDMEIRGVGNLLGAEQSGQMMAIGFELYMEMLQEAIKEIQGQEIPKVDETQIDL----QLTAFIPSDYIP-DLQQKMDAYRRIAMANSKEQLEEIVKDWTDRYGTIPSPVRQLLQVIELKQIGKSLGFSRIKVE 1085
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: UPI001FF4BB70 (transcription-repair coupling factor n=1 Tax=Synechococcus sp. C9 TaxID=102119 RepID=UPI001FF4BB70) HSP 1 Score: 493 bits (1268), Expect = 3.010e-150 Identity = 272/599 (45.41%), Postives = 398/599 (66.44%), Query Frame = 3
Query: 1095 DYVVHEDLGFCRYLAPEFLE-DAKAEE-IMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRM-PVDIRVALL-RGGNTLGSRDIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKV--KGLEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSI 2873
DYV+H G ++L + LE D + E ++L++AD L + D+ L+RYR + L + + TW + + KV++ + K A+N+++LYAKRA R P PD P + F Y T DQ + +Q +++D+ + PMDRL+CGDVGFGKTEVAIRAIF+++ +QVALLAPTT+LA QHY TL +R P I++ALL R + + I ++ +D VVGTH LLS V F +LGLLV+DEEQ+FGVN KEK+K L T VDVLTLTATPIPRTL M+L+G+R++S I +PP R+ + T+++ + ++ AI +E+ RGGQVF V+P+I +E A QI + +P AK+ + H ++ + LE +L F+ G DIL+ T+I+E+G+D+P VN+I++ D+H FGL+QLYQ+RGRVGR+ V AY +L YP LT EAK RL+A++E +HLGSG++LA RDL+IRGAG+I G +QSG + +G++LY+ ML++AI VRG +I V ++D+ L +PA YM N E++ L + +EL +IA+EWV +YGE+P+PV +L + + LG+S I
Sbjct: 467 DYVIHRHHGCGQFLRLDKLEIDGQIREYLVLQYADGLLQVAVDQVGSLSRYRGGGTQKPELHRLANK-TWEKTREKVRKSLKKLAVNLLELYAKRAEQTRTPYSPDSPWQKELEDSFPYALTPDQAKAIQAVKADLEAPR-PMDRLVCGDVGFGKTEVAIRAIFKVLLAGRQVALLAPTTVLAQQHYHTLKERFAPYPIQIALLNRFRSPQERKQILAKLKTGELDCVVGTHQLLSNTVTFRDLGLLVVDEEQRFGVNHKEKIKALKTTVDVLTLTATPIPRTLSMALSGLREMSLITTPPPSRRPIKTHLIPYQPETIRAAIAQELDRGGQVFYVLPKIAGMEAAIAQIQQMIPTAKIMLAHGQLAPEELEVAMLAFSNGEADILVCTTIVESGLDIPRVNTIIIEDAHRFGLAQLYQLRGRVGRAGVQAYAWLTYPSEELLTEEAKARLRAIQEFTHLGSGYQLALRDLDIRGAGDILGAEQSGQVAAVGFDLYLEMLQEAIQEVRGQEIPSVDDTQIDLN----LTAFIPANYMP-NLEQKLSAYRTLATAETPQELTKIAQEWVNSYGELPVPVVQLILVMRVKLLAKQLGISRI 1058
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Match: UPI001A0F713F (Transcription-repair coupling factor n=1 Tax=Thermoleptolyngbya sp. M55_K2018_002 TaxID=2747808 RepID=UPI001A0F713F) HSP 1 Score: 482 bits (1241), Expect = 3.730e-150 Identity = 266/599 (44.41%), Postives = 391/599 (65.28%), Query Frame = 3
Query: 1095 DYVVHEDLGFCRYLAPEFL--EDAKAEEIMLEFADTNLPIRRDESHLLTRYRAADAARVPLSVVEEQGTWLRHKLKVQERVTKQAINVMDLYAKRARIEREPCRPDGPDMEVFCAGFEYDPTTDQLRCLQEIESDMVWRKVPMDRLLCGDVGFGKTEVAIRAIFRMVRNKKQVALLAPTTILAAQHYRTLLKRM-PVDIRVALLRGGNTLGSR-DIKEAIRNCTVDVVVGTHSLLSRKVEFPNLGLLVIDEEQKFGVNQKEKLKVLSTGVDVLTLTATPIPRTLHMSLTGIRDLSTIFSPPEGRQNVTTYIMKATDDILKRAITREMSRGGQVFVVVPRINQIELAWEQINRCVPEAKVAVGHSKVKG--LEDVVLQFTLGRGDILLATSIIENGIDMPNVNSIVVMDSHMFGLSQLYQMRGRVGRSNVAAYTYLLYPPGHALTNEAKRRLKAMRELSHLGSGFELANRDLEIRGAGNIFGTDQSGDLKDIGYELYMNMLEKAIVSVRGTDITPVLRCEVDMGFARELEGSVPAEYMTCNDEERARQVERLRVCNSFRELVRIAKEWVTAYGEMPIPVRRLFKHTHLHTACRLLGVSSI 2873
DYVVH++ G +++ E L ++ E ++L++AD L + D+ + L+R+R + LS + + W R K KV++ + K A +++ LYA+RA+ + PD P E F Y PTTDQL+ +Q+++ DM + PMDRL+CGDVGFGKTEVAIRAIF+ + KQVALLAPTTIL QHY TL +R P I+V LL T + DI + + + +DVVVGTH LL + V+F +LGLLV+DEEQ+FGVNQKEK+K L T VDVLTL+ATPIPRTL+M+L+G+R++S I +PP R+ + T++ ++++ AI +E+ RGGQVF VVPR+ IE +I VP ++A+ H +++ LE +L F G DIL+ T+IIE+G+D+P VN+I++ D+ FGLSQLYQ+RGRVGR+ + A+ +L YP LT A++RL+A++E + LGSG++LA RD+EIRG GN+ G +QSG + IG++LYM MLE+AI +RG +I V ++D+ L +PA+Y+ D++ + + + +EL IA +W YG +P +LF+ L + LG S I
Sbjct: 127 DYVVHKNHGIGQFIKLESLTLDNETREYLVLKYADGLLRVAADQVNALSRFRGVGEGKPELSKMTGKA-WERTKQKVRKAIKKVAFDLLQLYAQRAQQQGHAYPPDTPWQEEMEDSFPYQPTTDQLKAIQDVKRDMEGDR-PMDRLVCGDVGFGKTEVAIRAIFKAITAGKQVALLAPTTILTQQHYHTLKERFAPYPIQVGLLNRFRTNAEKQDILKRLASGELDVVVGTHQLLGKGVQFKDLGLLVVDEEQRFGVNQKEKIKTLKTQVDVLTLSATPIPRTLYMALSGVREMSLITTPPPSRRPIKTHLSPYDPEMVRTAIRQELDRGGQVFYVVPRVEGIEETAAKIREMVPGVRMAIAHGQMQEGELEATMLTFNNGEADILVCTTIIESGLDIPRVNTILIEDAQKFGLSQLYQLRGRVGRAGIQAHAWLFYPKQSQLTETARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDAIGFDLYMEMLEEAIKEIRGQEIPQVDDTQIDL----RLTAFIPADYIPDLDQKMS-AYRAVAAAQTKQELTEIAVDWSDRYGPIPPAALQLFRVVELKQIAKKLGFSRI 718 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig740.18661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig740.18661.1 >prot_F-serratus_M_contig740.18661.1 ID=prot_F-serratus_M_contig740.18661.1|Name=mRNA_F-serratus_M_contig740.18661.1|organism=Fucus serratus male|type=polypeptide|length=1168bp MNSITILLPSLCWIMRSGTGFVVQLHGGPGLASGTTRASDEHHDQRQSWTback to top mRNA from alignment at F-serratus_M_contig740:217802..236833+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig740.18661.1 ID=mRNA_F-serratus_M_contig740.18661.1|Name=mRNA_F-serratus_M_contig740.18661.1|organism=Fucus serratus male|type=mRNA|length=19032bp|location=Sequence derived from alignment at F-serratus_M_contig740:217802..236833+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig740:217802..236833+ >mRNA_F-serratus_M_contig740.18661.1 ID=mRNA_F-serratus_M_contig740.18661.1|Name=mRNA_F-serratus_M_contig740.18661.1|organism=Fucus serratus male|type=CDS|length=7008bp|location=Sequence derived from alignment at F-serratus_M_contig740:217802..236833+ (Fucus serratus male)back to top |