prot_F-serratus_M_contig740.18664.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig740.18664.1
Unique Nameprot_F-serratus_M_contig740.18664.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length228
Homology
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BLAST of mRNA_F-serratus_M_contig740.18664.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 4.070e-28
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 0 
Query:  152 FSMAAISMGLGGSEARGFSSAEFVGSCFRRGRKDGLLLHYVDKAPSDYPLEYESKIAGASSIDWSLMRKDLKVDALC 228
            FSMA  S GL GSE RG  SAEFVGSCFR+GRKDGLLL+YV+KAP DYP E ESK AGA+S+DWS+MRK LKVDA C
Sbjct:  120 FSMATFSGGLDGSEGRGIPSAEFVGSCFRKGRKDGLLLYYVEKAPRDYPFEVESKAAGAASLDWSVMRKHLKVDAFC 196
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BLAST of mRNA_F-serratus_M_contig740.18664.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 8.920e-27
Identity = 56/75 (74.67%), Postives = 62/75 (82.67%), Query Frame = 0 
Query:  154 MAAISMGLGGSEARGFSSAEFVGSCFRRGRKDGLLLHYVDKAPSDYPLEYESKIAGASSIDWSLMRKDLKVDALC 228
            MA  S GL GSE RG  SAEFVGSCFR+GRKDGLLL+YV+KAP DYP E ESK AGA+S+DWS+MRK LKVDA C
Sbjct:    1 MATFSGGLDGSEGRGIPSAEFVGSCFRKGRKDGLLLYYVEKAPRDYPFEVESKAAGAASLDWSVMRKHLKVDAFC 75
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig740.18664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L351_9PHAE4.070e-2875.32DNMT1-RFD domain-containing protein n=1 Tax=Ectoca... [more]
D7G6R7_ECTSI8.920e-2774.67Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig740contigF-serratus_M_contig740:342565..343369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig740.18664.1mRNA_F-serratus_M_contig740.18664.1Fucus serratus malemRNAF-serratus_M_contig740 342565..343371 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig740.18664.1 ID=prot_F-serratus_M_contig740.18664.1|Name=mRNA_F-serratus_M_contig740.18664.1|organism=Fucus serratus male|type=polypeptide|length=228bp
PGGAPTPAAAKGVAGPNRGKGSRVVGNKMELTPNTSDSSNRKRPAEESAH
SDIFDSDDGSLPSGSAKRARKSKSKIRMDGGGVSRGEGKENATKLGVGGA
KGGNALGSGSSKVQGKTPTPGASGAHKKRKANAVEKSGSTPPRKKRTLMQ
RFSMAAISMGLGGSEARGFSSAEFVGSCFRRGRKDGLLLHYVDKAPSDYP
LEYESKIAGASSIDWSLMRKDLKVDALC
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