prot_F-serratus_M_contig74.18652.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig74.18652.1
Unique Nameprot_F-serratus_M_contig74.18652.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length523
Homology
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BLAST of mRNA_F-serratus_M_contig74.18652.1 vs. uniprot
Match: D7FHQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ2_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 4.280e-28
Identity = 68/88 (77.27%), Postives = 78/88 (88.64%), Query Frame = 0 
Query:    1 MARRLKESSIAINQTLRAQTQVLEDTGEAATVNVDKVKRETARVTERLRKRRAAVCVSWCMIIMVIVTFLVTYVLVILPFDKRRGPFV 88
            MA RLKESS+AINQTLR QTQVLEDTG+AAT NVD+VKRE ARV+ERLRK+RAA+  SWCM+I V+VTF  TY LVI+PF+KRRGPFV
Sbjct:  203 MAGRLKESSVAINQTLRTQTQVLEDTGDAATQNVDRVKRENARVSERLRKKRAAMFASWCMMITVVVTFFATYFLVIVPFEKRRGPFV 290
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BLAST of mRNA_F-serratus_M_contig74.18652.1 vs. uniprot
Match: A0A6H5L6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N4_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 3.510e-26
Identity = 77/142 (54.23%), Postives = 95/142 (66.90%), Query Frame = 0 
Query:    1 MARRLKESSIAINQTLRAQTQVLEDTGEAATVNVDKVKRETARVTERLRKRRAAVCVSWCMIIMVIVTFLVTYVLVILPFDKRRGPFVRRSRSTATVRQSRDVSASVQRQKHVKQQQQIHQLHREMSCQDAADLEEVVRDSQ 142
            MA RLKESS+AINQTLR QTQVLEDTG+AA  NV +VKRE ARV+ERLRK+RAA+  SWCM+I V+ TF  TY LVI+PF+KRRGPFV       T R S    A+  R++   Q + +       +   AA  EE+ R +Q
Sbjct:  209 MAGRLKESSVAINQTLRTQTQVLEDTGDAAIQNVGRVKRENARVSERLRKKRAAMFASWCMMITVVATFFATYFLVIMPFEKRRGPFV-------TARTSAFAQAAEPRERIPSQHEHV------ATAAGAATAEEIQRRAQ 337
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig74.18652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHQ2_ECTSI4.280e-2877.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6N4_9PHAE3.510e-2654.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 501..521
NoneNo IPR availableCOILSCoilCoilcoord: 330..350
NoneNo IPR availablePANTHERPTHR13050:SF7VESICLE TRANSPORT PROTEIN USE1coord: 1..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..522
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
IPR019150Vesicle transport protein, Use1PFAMPF09753Use1coord: 1..72
e-value: 4.8E-12
score: 46.1
IPR019150Vesicle transport protein, Use1PANTHERPTHR13050USE1-LIKE PROTEINcoord: 1..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig74contigF-serratus_M_contig74:596852..614907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig74.18652.1mRNA_F-serratus_M_contig74.18652.1Fucus serratus malemRNAF-serratus_M_contig74 596785..615733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig74.18652.1 ID=prot_F-serratus_M_contig74.18652.1|Name=mRNA_F-serratus_M_contig74.18652.1|organism=Fucus serratus male|type=polypeptide|length=523bp
MARRLKESSIAINQTLRAQTQVLEDTGEAATVNVDKVKRETARVTERLRK
RRAAVCVSWCMIIMVIVTFLVTYVLVILPFDKRRGPFVRRSRSTATVRQS
RDVSASVQRQKHVKQQQQIHQLHREMSCQDAADLEEVVRDSQPGGSRGDG
TRSKGDPVHDILEDKPSAGQQSVPASPKASREKREATQKQIEGSAKEDSK
ANGIDQAAPLSEESAGPNEGSDRADPGEAEAALLAIHPEIEIAEERGHEG
AEDAAPLSAESARPNEEFGPNEGSDRADPGEAEAALLAIHPEIEIAEERG
HDGAEDGAAREGHEQDVEEEAAAEEESTVLDEKRTQLTEEEEVEEEEEEA
FQRPGAEEARTSHQPANAVPRPPLAADGDSEGYHRQHGERVAVAEQVRGE
KEAVTPGASEGPDIPRRPAVRFDGGAAYGVILGTTTEKSTESRAQRDDGE
GKSAAAAVTRAADSSSAVADAPCEETSQTALAVEEGGDASADGGADEDGS
LEAVRRRLRESMGNKRGAQDEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019150Vesicle_transport_protein_Use1