mRNA_F-serratus_M_contig738.18641.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig738.18641.1
Unique NamemRNA_F-serratus_M_contig738.18641.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig738.18641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig738contigF-serratus_M_contig738:335983..338801 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons2
Model size264
Cds size231
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig738.18641.1prot_F-serratus_M_contig738.18641.1Fucus serratus malepolypeptideF-serratus_M_contig738 336015..338801 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932237.588165-UTR-F-serratus_M_contig738:335982..3360141622932237.588165-UTR-F-serratus_M_contig738:335982..336014Fucus serratus maleUTRF-serratus_M_contig738 335983..336014 +
1690964212.6221154-UTR-F-serratus_M_contig738:335982..3360141690964212.6221154-UTR-F-serratus_M_contig738:335982..336014Fucus serratus maleUTRF-serratus_M_contig738 335983..336014 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932237.6145945-CDS-F-serratus_M_contig738:336014..3361341622932237.6145945-CDS-F-serratus_M_contig738:336014..336134Fucus serratus maleCDSF-serratus_M_contig738 336015..336134 +
1690964212.633825-CDS-F-serratus_M_contig738:336014..3361341690964212.633825-CDS-F-serratus_M_contig738:336014..336134Fucus serratus maleCDSF-serratus_M_contig738 336015..336134 +
1622932237.6324077-CDS-F-serratus_M_contig738:338690..3388011622932237.6324077-CDS-F-serratus_M_contig738:338690..338801Fucus serratus maleCDSF-serratus_M_contig738 338691..338801 +
1690964212.645146-CDS-F-serratus_M_contig738:338690..3388011690964212.645146-CDS-F-serratus_M_contig738:338690..338801Fucus serratus maleCDSF-serratus_M_contig738 338691..338801 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig738.18641.1

>prot_F-serratus_M_contig738.18641.1 ID=prot_F-serratus_M_contig738.18641.1|Name=mRNA_F-serratus_M_contig738.18641.1|organism=Fucus serratus male|type=polypeptide|length=77bp
MARMTRRVLVRRAWGNVLRRACSLMGKCFGRSWNFFLKNKGMNEDKPSRG
FRTTKSTLAGLLVTVMETETDEEGRER
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mRNA from alignment at F-serratus_M_contig738:335983..338801+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig738.18641.1 ID=mRNA_F-serratus_M_contig738.18641.1|Name=mRNA_F-serratus_M_contig738.18641.1|organism=Fucus serratus male|type=mRNA|length=2819bp|location=Sequence derived from alignment at F-serratus_M_contig738:335983..338801+ (Fucus serratus male)
CGAGCTCGAAGGAGAGGAGGATTGGGAAGGCGATGGCAAGGATGACTCGT
CGCGTACTGGTCCGCCGAGCTTGGGGAAATGTTCTCCGCCGAGCTTGCTC
GTTGATGGGGAAATGTTTTGGGAGGAGCTGGAATTTTTTTCTGAAGAACA
AGGTGAGGTTTGCAAGAGCAGACAAAGCTGGAGCTCAAACACAGCCCGGC
ATGAATGTGGTACTCTTATAATTTCTGTACCAGTCTACGGAACTACAGGC
ACTCGAATTTAGACGGAAACAGCACCAGTAATCAACAAACATACCTGGTA
CTACTGCTGTACAACAGTATATACAGTACTCGTTTCAATCATTGCTTTTG
TCCTTGCTGTTTTTCTGGTGTCCCTGCATGGTGATTAATGTAAGTGTACA
GTATGACGGTGGATTCCTCCCCGATATTCTACTGTTGACCCAATGTTACC
ACCATAGGGGAACCCGTTTAAATGCCATGAAGAGGTTTTGTATTTGCAGC
CTTCGAGCCGACCTGAACGTTTTGACATGTTTCCCCCTGACTGGGGGATG
CTAAGGTCTAGGTGCGTTCTGTATTTCTTTAAACAAGGAGGGAAGCTCCA
CGGTGAGACAAATAGAAGGCAGAATCGCCGACGAAACGTCTATGCCTCCC
TTGAATTATGAATGCTCGGGCCCGGCTGCTAAAGACAACCAGCGTCGTGG
GTACACACGGGCTTCGCCGCGCTTCTACGGTGAAAATAAAACTCGCTCTT
CCATTCCAAAAAACGCGGGCGAACCTTTATCCCGCCGCCCAAATACGTGT
GAACCTCAACCAATCATATGAGATGCCAGGGTCCACGTCATGATGTATTT
TCTTTTCTTAAAAGTAACCTATTGTATGAAGGAGGATTGGTCCTGGAAAC
GGTGCGCTTTTTCCTAAAAACTTGACCCACGAGAAAAATGTTTCCGAAAC
TGTCTATTGTCACGAACCCGAGATTTTATAATTTGACGAAAAGTCCCGAA
ATGGTATTCTGATTGGTCAATGTGCACAGTCTTTGATACACCCGAACCCA
AATCGATGCACCTTACAGATTAGAAGCTCACTACGCTCGCAATAAAATAC
CCGCAGTAAATTTACAATATAATATTCTACACATAGGACATATCAGATCC
CTGTAAATCGATCTAGATCGTTACATCGACAGATCGCGGTTGATCTGTCG
CGACAGATCATCTGTGCACGTTTGCCGGCAGCTGATCTGTAGCCACAGGT
CATCTGTACACTTTTGCCGGCAGCTGATCTGTAGCCACAGATCATCTGTA
CATGTTTGGCAGCAGCTGATCTGTACCCACAGATCATCTGTATATGATTG
GCAACAGCTGATCTGTAGCCACACACCATCTGTACATGTTTGGCAACAGC
TGATCTGCAGCCACAGATCATCTGTACATGTTTGGCAGCAGCTGATCTGT
AGCCACAGATGAACTAGATCATGATCTGTCCTATGTGTGATATGTTATTA
ATAGTACACACATACTGGTAGGACATATCAGATCCCTGTAGATCGATCTA
GATCGTCACATCGACAGATCACGGTTGAACTGTCGCGACAGATCATCTGT
GCACGTTTGCCTTCAGCTGATCTGTAGCCACAGATCATCTGTACACGTTT
GCCGGCAGCTGATCTGTAGCCATAGCTCATCTGTAGATGTTTGGCAGCAG
CTGATCTGTAGCCACAGACCAACTGTTCATGTTTGGCAACAACTGATATT
TAGCCACAGATCATCTGTACATGTTTGGCAACAGCTGATCTGTTGCCTCA
GACCATCTGTACATGTTTGGCAGCAGCTGACCTGTTGGCCACAGATCATC
TGTATATGTTTGGCAGCAGCTGATCTGTAGCCACAGATGAACTAGATCAT
GATCTGTCCTATGTGTGCAATATTCATCATGTATCAGCATAATATTCAAT
TAGAAATGTTGAACGATACTATCAACCCCACCGGCCGTGGTTGAACGTTT
CTACAAAAATACTCCATAATGTTGATTACCTGGTAAAAATACTCCATAAT
GTTGATTACCTGGTATCACGTCGGTACTTTCAACATGCCCACTTCATACC
AATAGTGGGTATGGGAAAGAGAGGCGTATATCAATTGGTCCATAGTGACC
TGCTAAGGCAGTACTCGTTCGGAACTACCTTGAGGTTTACTGGCCCTATG
CCGGCGGAATCTCGGCAGTGAACGCCATCGGTACGCAATTGTGTGATCCG
ATAAACTTGGGACTTACCCGATGGCGTATGGCGGTTTAAAATAAATATAT
GGACGCCGCCACGGAACTCGGGAGGAATCCCATAAGTAAGCACCAAATTC
AGCCTGAGTATGGAGATGAGCAGGCTGGCGCGGGACGGGATTGCCGAAAC
CGTCTCACGAGACCAGTTTCTCAGGCACGAACGCGGACAGGGGAATATTC
ATTTTCCTTGTTCAGCTGACCACGAGCAGGATTGGCAACTTAAGCCGGTT
GATCCATACTCTGCTATATGTGTGACCATACAACATGTGATAAAAATCAG
CCATTAGTAAAAATAATAAATAATAACCAAACTGGTGAAATAATATCATA
CATATGTCGTGCTGATCTCAAACAATATTTCTAACAAGAACACCATTATA
ACTATATAATCTCCTCCCCCACCTCCCCCCCTCCCCCAATAAAAAAAACA
ATACGAAGGGCATGAACGAGGACAAGCCCTCTCGCGGATTCCGCACTACC
AAGAGCACGCTAGCAGGGCTGCTGGTGACGGTGATGGAGACGGAGACGGA
TGAAGAAGGCCGAGAGCGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig738:335983..338801+

>mRNA_F-serratus_M_contig738.18641.1 ID=mRNA_F-serratus_M_contig738.18641.1|Name=mRNA_F-serratus_M_contig738.18641.1|organism=Fucus serratus male|type=CDS|length=462bp|location=Sequence derived from alignment at F-serratus_M_contig738:335983..338801+ (Fucus serratus male)
ATGGCAAGGATGACTCGTCGCGTACTGGTCCGCCGAGCTTGGGGAAATGT
TCTCCGCCGAGCTTGCTCGTTGATGGGGAAATGTTTTGGGAGGAGCTGGA
ATTTTTTTCTGAAGAACAAGATGGCAAGGATGACTCGTCGCGTACTGGTC
CGCCGAGCTTGGGGAAATGTTCTCCGCCGAGCTTGCTCGTTGATGGGGAA
ATGTTTTGGGAGGAGCTGGAATTTTTTTCTGAAGAACAAGGGCATGAACG
AGGACAAGCCCTCTCGCGGATTCCGCACTACCAAGAGCACGCTAGCAGGG
CTGCTGGTGACGGTGATGGAGACGGAGACGGATGAAGAAGGCCGAGAGCG
CGGCATGAACGAGGACAAGCCCTCTCGCGGATTCCGCACTACCAAGAGCA
CGCTAGCAGGGCTGCTGGTGACGGTGATGGAGACGGAGACGGATGAAGAA
GGCCGAGAGCGC
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