mRNA_F-serratus_M_contig7374.18626.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7374.18626.1 vs. uniprot
Match: D7FMN1_ECTSI (Casein kinase I n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN1_ECTSI) HSP 1 Score: 59.7 bits (143), Expect = 7.080e-9 Identity = 40/61 (65.57%), Postives = 41/61 (67.21%), Query Frame = 1
Query: 31 VAGDEAEGEARGKKRRRKNSAGADAA-----SAMELRVGKKYRL---IGSGSFGDIYLGTN 189
VAG EAR KRRRK S +A SAMELRVGKKYRL IGSGSFGDIYLGTN
Sbjct: 72 VAGTNEGAEARATKRRRKTSPSTTSAEEAERSAMELRVGKKYRLGRKIGSGSFGDIYLGTN 132
BLAST of mRNA_F-serratus_M_contig7374.18626.1 vs. uniprot
Match: A0A662WQX3_9STRA (Casein kinase I (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQX3_9STRA) HSP 1 Score: 49.3 bits (116), Expect = 3.650e-6 Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 1
Query: 109 SAMELRVGKKYRL---IGSGSFGDIYLGTN 189
SA+ELRVGKK+RL IGSGSFGDIYLGTN
Sbjct: 7 SALELRVGKKFRLGRKIGSGSFGDIYLGTN 36
BLAST of mRNA_F-serratus_M_contig7374.18626.1 vs. uniprot
Match: A0A7R9VV50_9STRA (Casein kinase I (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VV50_9STRA) HSP 1 Score: 48.9 bits (115), Expect = 8.720e-6 Identity = 25/28 (89.29%), Postives = 25/28 (89.29%), Query Frame = 1
Query: 115 MELRVGKKYRL---IGSGSFGDIYLGTN 189
MELRVGKKYRL IGSGSFGDIYLGTN
Sbjct: 44 MELRVGKKYRLGKKIGSGSFGDIYLGTN 71
BLAST of mRNA_F-serratus_M_contig7374.18626.1 vs. uniprot
Match: A0A1B3SP00_9STRA (Casein kinase I n=1 Tax=Eurychasma dicksonii TaxID=159317 RepID=A0A1B3SP00_9STRA) HSP 1 Score: 49.7 bits (117), Expect = 2.410e-5 Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 1
Query: 109 SAMELRVGKKYRL---IGSGSFGDIYLGTN 189
+A+ELRVGKKYRL IGSGSFGDIYLGTN
Sbjct: 7 TALELRVGKKYRLGRKIGSGSFGDIYLGTN 36
BLAST of mRNA_F-serratus_M_contig7374.18626.1 vs. uniprot
Match: UPI000C253D5A (casein kinase I-like n=1 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C253D5A) HSP 1 Score: 47.0 bits (110), Expect = 2.700e-5 Identity = 24/28 (85.71%), Postives = 24/28 (85.71%), Query Frame = 1
Query: 115 MELRVGKKYRL---IGSGSFGDIYLGTN 189
MELRVG KYRL IGSGSFGDIYLGTN
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGTN 28
BLAST of mRNA_F-serratus_M_contig7374.18626.1 vs. uniprot
Match: A0A8C7YDP5_9TELE (Protein kinase domain-containing protein n=1 Tax=Oryzias sinensis TaxID=183150 RepID=A0A8C7YDP5_9TELE) HSP 1 Score: 47.0 bits (110), Expect = 3.210e-5 Identity = 24/28 (85.71%), Postives = 24/28 (85.71%), Query Frame = 1
Query: 115 MELRVGKKYRL---IGSGSFGDIYLGTN 189
MELRVG KYRL IGSGSFGDIYLGTN
Sbjct: 1 MELRVGNKYRLGRKIGSGSFGDIYLGTN 28
BLAST of mRNA_F-serratus_M_contig7374.18626.1 vs. uniprot
Match: H3HDS0_PHYRM (Casein kinase I n=28 Tax=Oomycota TaxID=4762 RepID=H3HDS0_PHYRM) HSP 1 Score: 49.3 bits (116), Expect = 3.290e-5 Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 1
Query: 109 SAMELRVGKKYRL---IGSGSFGDIYLGTN 189
SA+ELRVGKK+RL IGSGSFGDIYLGTN
Sbjct: 7 SALELRVGKKFRLGRKIGSGSFGDIYLGTN 36
BLAST of mRNA_F-serratus_M_contig7374.18626.1 vs. uniprot
Match: A0A662Y1I2_9STRA (Casein kinase I (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1I2_9STRA) HSP 1 Score: 49.3 bits (116), Expect = 3.310e-5 Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 1
Query: 109 SAMELRVGKKYRL---IGSGSFGDIYLGTN 189
SA+ELRVGKK+RL IGSGSFGDIYLGTN
Sbjct: 16 SALELRVGKKFRLGRKIGSGSFGDIYLGTN 45
BLAST of mRNA_F-serratus_M_contig7374.18626.1 vs. uniprot
Match: A0A485LGB4_9STRA (Casein kinase I n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGB4_9STRA) HSP 1 Score: 49.3 bits (116), Expect = 3.310e-5 Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 1
Query: 109 SAMELRVGKKYRL---IGSGSFGDIYLGTN 189
SA+ELRVGKK+RL IGSGSFGDIYLGTN
Sbjct: 7 SALELRVGKKFRLGRKIGSGSFGDIYLGTN 36
BLAST of mRNA_F-serratus_M_contig7374.18626.1 vs. uniprot
Match: A0A7S3DXS6_9STRA (Casein kinase I (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DXS6_9STRA) HSP 1 Score: 48.9 bits (115), Expect = 3.620e-5 Identity = 25/28 (89.29%), Postives = 25/28 (89.29%), Query Frame = 1
Query: 115 MELRVGKKYRL---IGSGSFGDIYLGTN 189
MELRVGKKYRL IGSGSFGDIYLGTN
Sbjct: 1 MELRVGKKYRLGRKIGSGSFGDIYLGTN 28 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7374.18626.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7374.18626.1 >prot_F-serratus_M_contig7374.18626.1 ID=prot_F-serratus_M_contig7374.18626.1|Name=mRNA_F-serratus_M_contig7374.18626.1|organism=Fucus serratus male|type=polypeptide|length=63bp PTSATPFNGAVAGDEAEGEARGKKRRRKNSAGADAASAMELRVGKKYRLIback to top mRNA from alignment at F-serratus_M_contig7374:12067..15310- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7374.18626.1 ID=mRNA_F-serratus_M_contig7374.18626.1|Name=mRNA_F-serratus_M_contig7374.18626.1|organism=Fucus serratus male|type=mRNA|length=3244bp|location=Sequence derived from alignment at F-serratus_M_contig7374:12067..15310- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7374:12067..15310- >mRNA_F-serratus_M_contig7374.18626.1 ID=mRNA_F-serratus_M_contig7374.18626.1|Name=mRNA_F-serratus_M_contig7374.18626.1|organism=Fucus serratus male|type=CDS|length=378bp|location=Sequence derived from alignment at F-serratus_M_contig7374:12067..15310- (Fucus serratus male)back to top |