mRNA_F-serratus_M_contig737.18623.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: D8LIY1_ECTSI (ClpS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIY1_ECTSI) HSP 1 Score: 239 bits (609), Expect = 5.710e-77 Identity = 130/193 (67.36%), Postives = 151/193 (78.24%), Query Frame = 1
Query: 16 FLRSLIFWLCLCAGRGFVMLPTARLPGRGLPTSRSCAPRNKLRSVSTDVSPPRITAASRWVRMSTA-DQEESTGG-TGTGVQTIVKKRVEVLTVPEEKEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESGDGGE 588
FL+++ WLCLCAGR FV LPTA G A R++ ++ R++ SRW+ MS+A DQ+ STGG TGTGVQTIVK++V+ + + KE+L KEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHK+GKATVTQAWKSK+E YCLQLQQCGLTASIAPDSKFEGG G GG+
Sbjct: 7 FLKAVALWLCLCAGRAFVALPTAAPRGVARRAVTGDAARSQQPVGCCGLTQQRVSQRSRWLSMSSATDQDVSTGGGTGTGVQTIVKEKVKEMVEVDNKEELDKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKSGKATVTQAWKSKSESYCLQLQQCGLTASIAPDSKFEGGGEGAGGK 199
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A835ZHY3_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHY3_9STRA) HSP 1 Score: 159 bits (401), Expect = 8.830e-47 Identity = 79/93 (84.95%), Postives = 86/93 (92.47%), Query Frame = 1
Query: 301 KEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKF-EGGESG 576
KE+L KE+WWRVILHND+IHTFDYVT SITKVVKKLTMK AYE+TMETHKAGKATVTQAWKS+AE YCL LQQCGLTASIAPDSKF +GG+ G
Sbjct: 23 KEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIAPDSKFGKGGDEG 115
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A835ZBL6_9STRA (Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL6_9STRA) HSP 1 Score: 153 bits (387), Expect = 2.460e-44 Identity = 81/110 (73.64%), Postives = 89/110 (80.91%), Query Frame = 1
Query: 220 EESTGGTGTGVQTIVKKRVE--VLTVPEEKEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIA 543
E TG TG +VK RV+ V + KE+L KE+WWRVILHND+IHTFDYVT SITKVVKKLTMK AYE+TMETHKAGKATVTQAWKS+AE YCL LQQCGLTASIA
Sbjct: 41 EVQTGSPSTGTSVLVKDRVKEKVEDQVQRKEQLDKEKWWRVILHNDDIHTFDYVTLSITKVVKKLTMKIAYEITMETHKAGKATVTQAWKSQAETYCLGLQQCGLTASIA 150
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A7S2W133_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W133_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.300e-33 Identity = 62/116 (53.45%), Postives = 79/116 (68.10%), Query Frame = 1
Query: 241 GTGVQTIVKKRVEVLTVPEEKEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESGDGGE 588
G GV TI R + T EEK L KE WWRV+LHNDEIHTF+YVT+++ KVV ++T +KA+++T TH +G +T+T WKS AE C+ LQ GLT SIAPD FE G GG+
Sbjct: 7 GRGVTTITIDRTDTDTKVEEKMDLDKEGWWRVLLHNDEIHTFEYVTEALVKVVPQITKRKAFQITRRTHMSGVSTITTVWKSLAEQMCMGLQTFGLTVSIAPDEDFEDNREGGGGQ 122
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A813J9Y2_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J9Y2_POLGL) HSP 1 Score: 127 bits (318), Expect = 6.170e-33 Identity = 58/92 (63.04%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 301 KEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESG 576
KE+ KE+WWRV+LHND+IHTF+YVT +TKVV+ LT +KAY +T E H +GKATV WK+ AE +C++LQQ GLT SIAPDSKFEG + G
Sbjct: 139 KEEFEKEKWWRVLLHNDDIHTFEYVTNCLTKVVQHLTRRKAYNITWEAHSSGKATVACVWKALAEQFCVKLQQDGLTVSIAPDSKFEGNKGG 230
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A7S1RIS0_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RIS0_ALECA) HSP 1 Score: 125 bits (314), Expect = 1.020e-32 Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 1
Query: 301 KEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESG 576
KE+ KE+WWRV+LHND+IHTF+YVT +T++V LT +KAY +T E H +GKATV WKS +E YC+ LQQ GLT SIAPDSKFEG + G
Sbjct: 105 KEQFDKEKWWRVLLHNDDIHTFEYVTGCLTRIVPHLTRRKAYNITWEAHSSGKATVACVWKSLSEQYCVNLQQLGLTVSIAPDSKFEGNKGG 196
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A7S3U5D7_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3U5D7_9SPIT) HSP 1 Score: 122 bits (307), Expect = 1.310e-32 Identity = 57/92 (61.96%), Postives = 72/92 (78.26%), Query Frame = 1
Query: 301 KEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESG 576
KE+ AKE+WWRV+LHND+IHTF+YVT +TK V+ LT +KAY +T E H +GKATV WK+ AE + ++LQQ GLT SIAPDSKFEG + G
Sbjct: 29 KEQFAKEKWWRVLLHNDDIHTFEYVTGCLTKTVQHLTRRKAYNITWEAHSSGKATVACVWKNLAEQFSVKLQQDGLTVSIAPDSKFEGNKGG 120
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A7S2GQ17_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQ17_9STRA) HSP 1 Score: 122 bits (305), Expect = 3.410e-32 Identity = 64/106 (60.38%), Postives = 76/106 (71.70%), Query Frame = 1
Query: 241 GTGVQTIVKKRVEVLTVPEEKEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKF 558
G GVQTI +V+ +EKE L +E WWRV+LHNDEIHTF+YVT++I K+ +LT KKAY +T TH AG ATVT WKS AE CL LQ GLT SIAPD+KF
Sbjct: 17 GAGVQTITIDKVD--NEVQEKEDLNEEGWWRVLLHNDEIHTFEYVTEAIVKICPQLTRKKAYMITRTTHGAGVATVTTVWKSLAEQMCLGLQTFGLTVSIAPDAKF 120
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A812W203_9DINO (CPLS1 protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812W203_9DINO) HSP 1 Score: 122 bits (307), Expect = 4.710e-32 Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 1
Query: 301 KEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESG 576
KE+ KE+WWRV+LHND+IHTF+YVT + KVV+ L+ +KAY +T E H +GKATV WK+ AE +C++LQQ GLT SIAPDSKFEG + G
Sbjct: 74 KEQFEKEKWWRVLLHNDDIHTFEYVTNCLVKVVQHLSRRKAYGITWEAHSSGKATVACVWKALAEQFCVKLQQDGLTVSIAPDSKFEGNKGG 165
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Match: A0A1Z5JEC0_FISSO (ClpS domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEC0_FISSO) HSP 1 Score: 122 bits (306), Expect = 6.480e-32 Identity = 69/147 (46.94%), Postives = 97/147 (65.99%), Query Frame = 1
Query: 142 RSVSTDVSPPRITAASRWVRMSTADQEESTGGTGTGVQTIVKKRVEVLTVPEEKEKLAKEQWWRVILHNDEIHTFDYVTQSITKVVKKLTMKKAYEVTMETHKAGKATVTQAWKSKAEGYCLQLQQCGLTASIAPDSKFEGGESGDG 582
RS ST SP R++ S ++ ++ ++ ST G VQ I K T + +E+ KE+ WRV+LHNDE+HTF+YV +S+TKV+ L K A+E+ ++TH GKAT+T+ WK +AE +CL LQ+ GLT SI+PD FEGG SG G
Sbjct: 27 RSSSTLTSPQRLSDTSIYM---SSVEKSSTTKKGKSVQVIDK------TETKAEEQKKKEEMWRVVLHNDEVHTFNYVVRSLTKVIGTLDRKAAFEICVQTHGIGKATITKTWKKQAEQFCLGLQRQGLTVSISPDEDFEGGHSGGG 164 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig737.18623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig737.18623.1 >prot_F-serratus_M_contig737.18623.1 ID=prot_F-serratus_M_contig737.18623.1|Name=mRNA_F-serratus_M_contig737.18623.1|organism=Fucus serratus male|type=polypeptide|length=197bp MAIMTFLRSLIFWLCLCAGRGFVMLPTARLPGRGLPTSRSCAPRNKLRSVback to top mRNA from alignment at F-serratus_M_contig737:379360..382065- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig737.18623.1 ID=mRNA_F-serratus_M_contig737.18623.1|Name=mRNA_F-serratus_M_contig737.18623.1|organism=Fucus serratus male|type=mRNA|length=2706bp|location=Sequence derived from alignment at F-serratus_M_contig737:379360..382065- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig737:379360..382065- >mRNA_F-serratus_M_contig737.18623.1 ID=mRNA_F-serratus_M_contig737.18623.1|Name=mRNA_F-serratus_M_contig737.18623.1|organism=Fucus serratus male|type=CDS|length=1182bp|location=Sequence derived from alignment at F-serratus_M_contig737:379360..382065- (Fucus serratus male)back to top |