mRNA_F-serratus_M_contig1243.1862.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1243.1862.1
Unique NamemRNA_F-serratus_M_contig1243.1862.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE)

HSP 1 Score: 338 bits (868), Expect = 4.610e-111
Identity = 162/248 (65.32%), Postives = 201/248 (81.05%), Query Frame = 1
Query:    7 QEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAEKY 750
            Q  AE   EGLEG+E LDDNDLGFQ LNSFGLGYRL  ++S    +K+R L+GA SLYD+R+ +NIPAFWSW NP++ P+WERA+NVDMIMNMEIMLWA+VNGG+  Y++ V +HADTTW D+VRDDYST+HVADYDP TG+LV++GTYQG+ D+STW+RGQAWA+YG  M+YRYLKE +FL  ++  L YF DNLP D +P ADFDAPV + DN KDSSATAIV SALFE++  TG+  YL  A+++
Sbjct:   19 QTYAEDMQEGLEGIEVLDDNDLGFQTLNSFGLGYRLVGTTS----FKDRTLSGAQSLYDYRYVSNIPAFWSWANPTNEPQWERAVNVDMIMNMEIMLWAAVNGGDAEYSDAVENHADTTWADLVRDDYSTYHVADYDPSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFTMVYRYLKEQRFLDYAINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFELTGEPTYLEKAQEF 261          
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 6.450e-111
Identity = 156/234 (66.67%), Postives = 190/234 (81.20%), Query Frame = 1
Query:   16 AEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETG 717
            AEF+C GLEG+E  +DND GFQ+LNSFGLGYRL+ S    D Y +RVLTGA++L+DFRW  NIPA+WSWENP+ RP+W+RA+NVDM+MN+EI+LWA +NGG     E V  HAD+TWKDIVR+D ST HVA YD DTG+ +E GTYQGY ++STWTRGQAWA+YG  M+YR+L E +FL RS+  LKY++DNLP D IPPADFDAP SATDNGKDSSA AIV+S L E++ ETG
Sbjct:  110 AEFYCSGLEGLESEEDNDTGFQILNSFGLGYRLTGS----DDYLQRVLTGAEALHDFRWDGNIPAYWSWENPTKRPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VEGHADSTWKDIVREDNSTNHVAAYDIDTGEFIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETG 338          
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 2.150e-109
Identity = 164/245 (66.94%), Postives = 198/245 (80.82%), Query Frame = 1
Query:   16 AEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAEKY 750
            AE   EGLEGVE LDDNDLGFQ LNSFGLGYRL    S    +KER L GA+SLYDFR+ +NIPAFWSW+ PS  P+WERA+NVDMIMNMEIMLWA+ NGG+T Y++ V +HADTTW D+VR+DYST+HVADYDP TGDL ++GTYQG+ D+STW+RGQAWAVYG  M++RYLK+ +FL RS+  L YF DNLP D +P ADFDAP ++ DN KDSSATAIVASALFE++  TG+  YL  A+++
Sbjct:   22 AEDIQEGLEGVELLDDNDLGFQTLNSFGLGYRLVGKGS----FKERTLAGAESLYDFRYASNIPAFWSWKKPSKEPQWERAVNVDMIMNMEIMLWAANNGGDTDYSDAVENHADTTWADLVREDYSTYHVADYDPSTGDLEDKGTYQGWQDDSTWSRGQAWAVYGFAMVHRYLKDERFLDRSILTLGYFVDNLPDDNVPYADFDAPENS-DNPKDSSATAIVASALFELFELTGEPTYLEKAQEF 261          
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 6.630e-107
Identity = 159/245 (64.90%), Postives = 196/245 (80.00%), Query Frame = 1
Query:   16 AEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAEKY 750
            AEF+C GLEG+E  +DND GFQ+LNSFGLGYRL+ S    + Y +RVLTGA++L+ FRW  NIPA+WSWENPS RP+W+RA+NVDM+MN+EI+LWA +NGG     E VA HAD+TWKDIVR+D ST HVA YD DTG+L+E GTYQGY ++STWTRGQAWA+YG  M+YR+L E +FL RS+  L+Y++DNLP D IPPADFDAP SATDNGKDSSA AIV+S L E++ ET D  YL  ++ Y
Sbjct:  147 AEFYCSGLEGLESEEDNDTGFQILNSFGLGYRLTGS----EEYLQRVLTGAEALHGFRWDGNIPAYWSWENPSRRPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VAGHADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLEYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQTY 386          
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 1.880e-106
Identity = 157/239 (65.69%), Postives = 192/239 (80.33%), Query Frame = 1
Query:   16 AEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYL 732
            AE   EGLEGVE LDDNDLGFQ LNSFGLGYRL  +SS +D      L+GA SLYD+R+ +NIPAFWSW NP S P+WERA+NVDMIMNMEIMLWA+VN G+  Y++   +HADTTW D+VRDDYSTFHVADY+  TG+LV++GTYQG+ D+STW+RGQAWA+YG +M++RYL++P+FL   +  L YF DNLP D +P ADFDAPV + DN KDSSATAIV SALFE++ +TG+  YL
Sbjct:   80 AEDMQEGLEGVELLDDNDLGFQTLNSFGLGYRLVGTSSFKDI----TLSGAQSLYDYRYVSNIPAFWSWANPKSEPQWERAVNVDMIMNMEIMLWAAVNDGDAEYSDAAENHADTTWADLVRDDYSTFHVADYNKSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFIMVHRYLQKPRFLDYGINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFEQTGEPSYL 313          
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: A0A6H5JQR3_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQR3_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 5.310e-64
Identity = 113/239 (47.28%), Postives = 149/239 (62.34%), Query Frame = 1
Query:   34 GLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAEKY 750
            GLE VE +DDND+G Q LNSFG  +RL ++S     Y  R    A +LY+ R+  NIPAFWSW NP + P+WER +NVD+I+N EI+LWA+VNGG   Y+   A                         D G     G YQG+ D+STW+RGQAWA+YG  M++RYLK+ +FL+ ++  L YF D+LP D +P ADFDAPV + DN KDSS TAIV SAL E++   G+  YL  A+++
Sbjct:   11 GLEEVERMDDNDVGLQTLNSFGQVHRLVNASH----YHARTRAAAQTLYNLRYDENIPAFWSWANPKNEPQWERVVNVDVIINTEIVLWAAVNGGKANYSAAAARAR---------------------ADLG-----GAYQGWQDDSTWSRGQAWAMYGFTMVHRYLKKQRFLEYAINTLSYFIDSLPDDNVPYADFDAPVDS-DNPKDSSVTAIVTSALLELFELIGEPSYLEKAQEF 218          
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: A0A6N6ZAI7_9BACT (Putative unsaturated glucuronyl hydrolase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZAI7_9BACT)

HSP 1 Score: 211 bits (537), Expect = 2.300e-62
Identity = 113/242 (46.69%), Postives = 155/242 (64.05%), Query Frame = 1
Query:   31 EGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRPEWER-AINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYF---DDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAE 744
            +G+       DND GFQ+  +FG    L +     D Y   ++ GAD+L D RW +NI AF +W    S P  E   +N+DM+MNMEI+LWAS +GGNT +A+    HAD +W+D+VRDDYSTFHV DY+ D G +  + T+QG+  +STW+RGQAWAVYG  M+YRY + P+ L+R+     YF    +    D +P +DFDAP+ + +N +D+SA AIVASA  E+Y  TG+ KYL  AE
Sbjct:  102 QGVRSRATATDNDTGFQIYCAFGTALMLGADVDTSD-YTSVIIQGADTLIDERWNSNIGAFRAWPASDSTPNTEPFEVNIDMMMNMEIILWASQHGGNTAWADAAISHADASWEDLVRDDYSTFHVVDYNLD-GSVDSKRTHQGWKTDSTWSRGQAWAVYGYTMLYRYTQLPRMLERAEHTFDYFMTATEAQVDDYVPYSDFDAPIDS-ENPRDTSAAAIVASAALELYQTTGEQKYLTAAE 340          
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL)

HSP 1 Score: 189 bits (479), Expect = 3.230e-54
Identity = 105/246 (42.68%), Postives = 148/246 (60.16%), Query Frame = 1
Query:    7 QEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSWENPSSRP-EWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPS---DGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYL 732
            Q+ AE + EG+       DND GFQ+ NSFGLGY +    S  D YK+ ++ GA +L   R+  +I AF SW    S P      +N+D +MNME++LW   +     + +    HAD TW+  VR++ ST+HV  Y P +G++V++ T+QG+   STW+RGQAW+VY   M YRY    + L+RS+   +YF ++      D +P +DFDAP+   DN +DSSATAIVASAL E+Y  T   KYL
Sbjct:  103 QQYAEHWTEGVRSRAYATDNDTGFQIFNSFGLGYTMGKKPS--DDYKQVLIDGASTLVKQRYNKDIGAFRSWRQGISNPTRLPFEVNIDQLMNMELVLWVGKHANKPEFTKMAISHADKTWEHGVRENGSTYHVVSYSP-SGEVVKKRTHQGWKTESTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIESTKQQTQDLVPYSDFDAPID-DDNPRDSSATAIVASALIELYKITQQEKYL 344          
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: UPI001F1B9B3F (glycoside hydrolase family 88 protein n=1 Tax=Vibrio hippocampi TaxID=654686 RepID=UPI001F1B9B3F)

HSP 1 Score: 189 bits (479), Expect = 3.230e-54
Identity = 109/253 (43.08%), Postives = 152/253 (60.08%), Query Frame = 1
Query:    7 QEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSW----ENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYF---DDNLPSDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAE 744
            Q+KAEF+ EG+       DND GFQV +SFGLGY +   +S  D YK+ +  GA++L   R+  +I AF SW    +NP++ P     +N+D +MNME++LW   N     Y +    HAD TW+  VRD+ ST+HV  Y+ D G +  + T+QG+  +STW+RGQAW+VY   M YR+    + L+RS+    YF        +D +P +DFDAP+    N KD+SATA+VAS L E+Y  T D KYL  AE
Sbjct:  102 QKKAEFWTEGVRSRAYATDNDTGFQVFDSFGLGYTIGGVTS--DDYKQVLKDGANTLVTERYNKDIGAFRSWNQRIDNPTTLPF---EVNIDQLMNMELVLWVGANADKPEYTQMAVSHADKTWQHGVRDNGSTYHVVSYNLD-GSVDSKRTHQGWQTDSTWSRGQAWSVYAYAMYYRFTGLERMLERSIKSYDYFLSATQQQTNDLVPYSDFDAPIDVR-NPKDTSATAVVASGLLELYHITKDEKYLNDAE 347          
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Match: UPI00200F5605 (glycoside hydrolase family 88 protein n=1 Tax=Agarivorans sp. TSD2052 TaxID=2937286 RepID=UPI00200F5605)

HSP 1 Score: 186 bits (473), Expect = 2.180e-53
Identity = 107/253 (42.29%), Postives = 154/253 (60.87%), Query Frame = 1
Query:    7 QEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKERVLTGADSLYDFRWTANIPAFWSW----ENPSSRPEWERAINVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLP---SDGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAE 744
            Q++A+F+ +G+       DND GFQ+ +SFGLGY L  +++    YK+ ++ GA+++ + R+  NI  F SW    +NP+  P     +N+D +MNME++LW   N     Y E    HAD TW+  +R + ST+HV  Y  D G +V++ T+QG+  +STW+RGQAW+VY   M YRY    + L+RS+   +YF +       D IP ADFDAP+    N +DSSATAIVASAL E+Y  T + KYL  AE
Sbjct:   97 QQRAKFWTDGVRSRAYATDNDTGFQIFDSFGLGYTLGGNAT--PDYKKVLIGGANTMVEQRYNKNIGTFRSWRQGAKNPTILPF---EVNIDQLMNMELILWVGQNADKPDYTEMAISHADKTWEHNLRKNASTYHVVGYGLD-GKVVDKRTHQGWKADSTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIEATKLQTQDFIPYADFDAPIDDK-NPRDSSATAIVASALLELYKITNEEKYLVDAE 342          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1243.1862.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQV0_9PHAE4.610e-11165.32GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LHN8_ECTSI6.450e-11166.67Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
D7FQV4_ECTSI2.150e-10966.94Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6H5KCI0_9PHAE6.630e-10764.90GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FUJ9_ECTSI1.880e-10665.69Unsaturated glucuronyl hydrolase, family GH88 n=3 ... [more]
A0A6H5JQR3_9PHAE5.310e-6447.28GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6N6ZAI7_9BACT2.300e-6246.69Putative unsaturated glucuronyl hydrolase n=1 Tax=... [more]
R9PSV9_AGAAL3.230e-5442.68Putative unsaturated glucuronyl hydrolase n=4 Tax=... [more]
UPI001F1B9B3F3.230e-5443.08glycoside hydrolase family 88 protein n=1 Tax=Vibr... [more]
UPI00200F56052.180e-5342.29glycoside hydrolase family 88 protein n=1 Tax=Agar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1243contigF-serratus_M_contig1243:277199..279859 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score338.2
Seed ortholog evalue3.3e-90
Seed eggNOG ortholog2880.D7FUK0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glycosyl Hydrolase Family 88
EggNOG OGs2CYCX@1,2S3MN@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size751
Cds size750
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929171.1651666-CDS-F-serratus_M_contig1243:277198..2772331622929171.1651666-CDS-F-serratus_M_contig1243:277198..277233Fucus serratus maleCDSF-serratus_M_contig1243 277199..277233 -
1690962734.9161198-CDS-F-serratus_M_contig1243:277198..2772331690962734.9161198-CDS-F-serratus_M_contig1243:277198..277233Fucus serratus maleCDSF-serratus_M_contig1243 277199..277233 -
1622929171.186601-CDS-F-serratus_M_contig1243:277498..2776381622929171.186601-CDS-F-serratus_M_contig1243:277498..277638Fucus serratus maleCDSF-serratus_M_contig1243 277499..277638 -
1690962734.927819-CDS-F-serratus_M_contig1243:277498..2776381690962734.927819-CDS-F-serratus_M_contig1243:277498..277638Fucus serratus maleCDSF-serratus_M_contig1243 277499..277638 -
1622929171.1992586-CDS-F-serratus_M_contig1243:277900..2780301622929171.1992586-CDS-F-serratus_M_contig1243:277900..278030Fucus serratus maleCDSF-serratus_M_contig1243 277901..278030 -
1690962734.9416363-CDS-F-serratus_M_contig1243:277900..2780301690962734.9416363-CDS-F-serratus_M_contig1243:277900..278030Fucus serratus maleCDSF-serratus_M_contig1243 277901..278030 -
1622929171.2173097-CDS-F-serratus_M_contig1243:278334..2784321622929171.2173097-CDS-F-serratus_M_contig1243:278334..278432Fucus serratus maleCDSF-serratus_M_contig1243 278335..278432 -
1690962734.9536474-CDS-F-serratus_M_contig1243:278334..2784321690962734.9536474-CDS-F-serratus_M_contig1243:278334..278432Fucus serratus maleCDSF-serratus_M_contig1243 278335..278432 -
1622929171.232941-CDS-F-serratus_M_contig1243:278691..2788431622929171.232941-CDS-F-serratus_M_contig1243:278691..278843Fucus serratus maleCDSF-serratus_M_contig1243 278692..278843 -
1690962734.9654236-CDS-F-serratus_M_contig1243:278691..2788431690962734.9654236-CDS-F-serratus_M_contig1243:278691..278843Fucus serratus maleCDSF-serratus_M_contig1243 278692..278843 -
1622929171.245016-CDS-F-serratus_M_contig1243:279250..2793641622929171.245016-CDS-F-serratus_M_contig1243:279250..279364Fucus serratus maleCDSF-serratus_M_contig1243 279251..279364 -
1690962734.9784124-CDS-F-serratus_M_contig1243:279250..2793641690962734.9784124-CDS-F-serratus_M_contig1243:279250..279364Fucus serratus maleCDSF-serratus_M_contig1243 279251..279364 -
1622929171.261087-CDS-F-serratus_M_contig1243:279778..2798591622929171.261087-CDS-F-serratus_M_contig1243:279778..279859Fucus serratus maleCDSF-serratus_M_contig1243 279779..279859 -
1690962734.9877582-CDS-F-serratus_M_contig1243:279778..2798591690962734.9877582-CDS-F-serratus_M_contig1243:279778..279859Fucus serratus maleCDSF-serratus_M_contig1243 279779..279859 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1243.1862.1prot_F-serratus_M_contig1243.1862.1Fucus serratus malepolypeptideF-serratus_M_contig1243 277199..279859 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1243.1862.1

>prot_F-serratus_M_contig1243.1862.1 ID=prot_F-serratus_M_contig1243.1862.1|Name=mRNA_F-serratus_M_contig1243.1862.1|organism=Fucus serratus male|type=polypeptide|length=250bp
MPQEKAEFFCEGLEGVEELDDNDLGFQVLNSFGLGYRLSSSSSLRDAYKE
RVLTGADSLYDFRWTANIPAFWSWENPSSRPEWERAINVDMIMNMEIMLW
ASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGT
YQGYADNSTWTRGQAWAVYGNVMIYRYLKEPKFLKRSLACLKYFDDNLPS
DGIPPADFDAPVSATDNGKDSSATAIVASALFEIYAETGDSKYLAWAEKY
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mRNA from alignment at F-serratus_M_contig1243:277199..279859-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1243.1862.1 ID=mRNA_F-serratus_M_contig1243.1862.1|Name=mRNA_F-serratus_M_contig1243.1862.1|organism=Fucus serratus male|type=mRNA|length=2661bp|location=Sequence derived from alignment at F-serratus_M_contig1243:277199..279859- (Fucus serratus male)
ATGCCACAGGAGAAAGCCGAATTCTTCTGTGAAGGCCTTGAAGGCGTGGA GGAGTTGGATGACAACGATCTTGGTTTCCAGGCGAGAGATGCGGGCATGT CCACGTGTTCGTGTCCCGAGGGGCGCGTTGTCTGCGAACTGTTATTATAT AATTCCAGAATTTTTCAGCGCGGTGTTCTTACATCCATCACGAGGTCACA GCAAAGGAAGAACGCCAAGGTTCAGACATTCCCACGTGACGGACGTTTCA GCCCACAAGCGAGGTCAAAGGGGACGAAGGGATGGAGAAATCTCATTTGC ATTCTTTGTGGAAAATCGTAGCTGAAATAGAATTTCCTCTCATCGGACCT GCGTGGCTAACGAGCAGGAAGCTACCTCGCAATGCTGCGTCTCGTGCATT TACAATGCCTTGCAATGCATCTCATGCATTCATGATCTACTTGGTGTGAC ACTTGCGTAACAGAGAAGCATTGCATGCACCGCTGGCGTTTGCAGGTACT CAACTCCTTCGGTCTAGGTTACAGGCTCTCGTCGTCCAGCTCTCTCCGTG ATGCTTACAAGGAGAGGGTGCTGACGGGCGCTGATTCGCTCTACGACTTT AGGTGGACGGTAAGTACCTCTGTATACTGTATATTACCAAGTGTCACCTG GGTCTGTTAAATACTTGTGCCGCCGCCTCGTTACGAATCTCGTAGTAGCC GTACACATCGGGCGTGGGGCGTACCCGATGGGCAGCGTACCAAACTAGCC CGTTGCCGTCCTCAGGCTCGTGTAGATATTCTTGGCGAAACAATACATGG CAATCCCTTCTCGCCTGACCTAACTGCGTGCGCTACCTTCGCTAGTCACC TTCAGTAAGAGGGGACTGCTCTTGTTTGCTTGACCTAGCTGTCGAGCCTT GTCAGAAGAAAAGTACATGTCGATGGAAAATCGTTCCCGCATTTTGAGTC GTGGATGGTCCGGACGTTTTCACTGCTGAAGCCTTTCTGCTACGACCCAC TGGCGCTGAAAAACAGGCAAACATTCCCGCCTTCTGGTCGTGGGAAAACC CTTCGTCGAGGCCAGAGTGGGAGCGTGCCATCAACGTCGACATGATCATG AACATGGAGATCATGCTGTGGGCCAGTGTCAATGGAGGAAACACGACCTA CGCGGAGAACGTCGCTGAGTGAGTACTTATAGGATATGCAGATACTTTGA TTTCACTATGCAGGTCTCTTCACCCGGTGACGCATCTACTCGTCCTACAG ACCTGTCGCTACTCTACCCAGGCTTCCCTCGAGGATCAAAGAACGTTCAT GGTCGTATCCTCTAGCACCTCTTACCGTCCAATCTCACTCCCGCGAGCTC GTTTATTCTTTTTCTACGCTGACACTCCTCAAACTAAAATGCGAAACGTG ATTCTGAATCGACAACGACCCTTCCAGCCACGCCGACACCACGTGGAAGG ATATCGTCCGTGACGACTACAGCACATTCCACGTAGCGGATTATGACCCC GATACCGGAGATCTTGTGGAACAAGGTACGTAGGGTAAATGTTCACTCGC ACGTACTAAGAAAGCGATTTCAATCACATTGAGCCGCACTCTTTACGAGT TTTTGTTTCCCGTGAGCCTCGTCGGTTTGGCGTGAAACCCGAACGCAACA CCGCCGGCCAACATTGCAAGCGACGAAACGTTTTTTTGCACCCAGAAACA TGAGAACGAAGCATCGTTAAACCGGCATCGAAGTATGACTTGGACGTGAT GACTCGCCGGCATAATAGGTGCGGACGGATTTGTGCCTTTTTACTTAGAA AACGGTTGTGCGTGCATTGCTCCCTATAGGGACGTACCAAGGTTACGCCG ACAACTCTACCTGGACAAGGGGGCAGGCCTGGGCCGTTTACGGAAACGTG ATGATCTACCGCTACCTGAAGGAGCCCAAGTTCCTCAAGCGATCGCTGGC CTGTCTCAAGTGAGATTTGGTGTGAGGTTCAGAAGTACCACAATGTGTTG CAAGCGATTTCCCCTTCACATAGCCCGTGTCTACGCTCCGCGGAAAACTC GCACCGGATAGAAGCTTCACGCTGAACGCGACAGGGCTGGGAACATTTGC TGGCAATACTATTGATATACGCCGTCTGCTCCTCCTGTTAATACTTCGTA CCGAGTCAAGCTTTTTACTGAGAACGTCCTATGTCGTTCGGCCCGCTGCC CCCCGCCGGGTTCGACTGCAGGTACTTCGACGACAATCTGCCGAGCGATG GAATCCCTCCAGCGGACTTCGATGCCCCGGTTTCTGCCACAGACAACGGG AAGGACAGCTCGGCCACGGCCATCGTCGCTTCCGCCCTCTTCGAGATATA TGCCGAAACCGGTGCGTCGTCACATTTGGAACTTCGAGTCACGCTGCACC ACGAACCGCCAAACGGTGTTTTATCATGTGTGTGGTCTGATACATAGCGT GACACCTTGTCTCCTTACTGAACGAAAACATATTACGTAAAGTCATCCAA TGTGGTTGAAGTTTACTCGTTTTATTTTCCTCACTGATGACATATCGTTT CTCCGGTTAATAAAATATACTGTTGACGGTTACTCTGCCGTTTACCGCCT TCTCCGACAAATCTACGCGCGGTCAGGGGACTCGAAGTACCTGGCCTGGG CGGAAAAATAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1243:277199..279859-

>mRNA_F-serratus_M_contig1243.1862.1 ID=mRNA_F-serratus_M_contig1243.1862.1|Name=mRNA_F-serratus_M_contig1243.1862.1|organism=Fucus serratus male|type=CDS|length=1500bp|location=Sequence derived from alignment at F-serratus_M_contig1243:277199..279859- (Fucus serratus male)
ATGCCACAGGAGAAAGCCGAATTCTTCTGTGAAGGCCTTGAAGGCGTGGA
GGAGTTGGATGACAACGATCTTGGTTTCCAGATGCCACAGGAGAAAGCCG
AATTCTTCTGTGAAGGCCTTGAAGGCGTGGAGGAGTTGGATGACAACGAT
CTTGGTTTCCAGGTACTCAACTCCTTCGGTCTAGGTTACAGGCTCTCGTC
GTCCAGCTCTCTCCGTGATGCTTACAAGGAGAGGGTGCTGACGGGCGCTG
ATTCGCTCTACGACTTTAGGTGGACGGTACTCAACTCCTTCGGTCTAGGT
TACAGGCTCTCGTCGTCCAGCTCTCTCCGTGATGCTTACAAGGAGAGGGT
GCTGACGGGCGCTGATTCGCTCTACGACTTTAGGTGGACGGCAAACATTC
CCGCCTTCTGGTCGTGGGAAAACCCTTCGTCGAGGCCAGAGTGGGAGCGT
GCCATCAACGTCGACATGATCATGAACATGGAGATCATGCTGTGGGCCAG
TGTCAATGGAGGAAACACGACCTACGCGGAGAACGTCGCTGAGCAAACAT
TCCCGCCTTCTGGTCGTGGGAAAACCCTTCGTCGAGGCCAGAGTGGGAGC
GTGCCATCAACGTCGACATGATCATGAACATGGAGATCATGCTGTGGGCC
AGTGTCAATGGAGGAAACACGACCTACGCGGAGAACGTCGCTGACCACGC
CGACACCACGTGGAAGGATATCGTCCGTGACGACTACAGCACATTCCACG
TAGCGGATTATGACCCCGATACCGGAGATCTTGTGGAACAAGCCACGCCG
ACACCACGTGGAAGGATATCGTCCGTGACGACTACAGCACATTCCACGTA
GCGGATTATGACCCCGATACCGGAGATCTTGTGGAACAAGGGACGTACCA
AGGTTACGCCGACAACTCTACCTGGACAAGGGGGCAGGCCTGGGCCGTTT
ACGGAAACGTGATGATCTACCGCTACCTGAAGGAGCCCAAGTTCCTCAAG
CGATCGCTGGCCTGTCTCAAGGACGTACCAAGGTTACGCCGACAACTCTA
CCTGGACAAGGGGGCAGGCCTGGGCCGTTTACGGAAACGTGATGATCTAC
CGCTACCTGAAGGAGCCCAAGTTCCTCAAGCGATCGCTGGCCTGTCTCAA
GTACTTCGACGACAATCTGCCGAGCGATGGAATCCCTCCAGCGGACTTCG
ATGCCCCGGTTTCTGCCACAGACAACGGGAAGGACAGCTCGGCCACGGCC
ATCGTCGCTTCCGCCCTCTTCGAGATATATGCCGAAACCGGTACTTCGAC
GACAATCTGCCGAGCGATGGAATCCCTCCAGCGGACTTCGATGCCCCGGT
TTCTGCCACAGACAACGGGAAGGACAGCTCGGCCACGGCCATCGTCGCTT
CCGCCCTCTTCGAGATATATGCCGAAACCGGGGACTCGAAGTACCTGGCC
TGGGCGGAAAAATACGGGACTCGAAGTACCTGGCCTGGGCGGAAAAATAC
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