mRNA_F-serratus_M_contig737.18612.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig737.18612.1
Unique NamemRNA_F-serratus_M_contig737.18612.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig737.18612.1 vs. uniprot
Match: D8LIW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW9_ECTSI)

HSP 1 Score: 378 bits (971), Expect = 3.430e-111
Identity = 329/868 (37.90%), Postives = 429/868 (49.42%), Query Frame = 3
Query:  849 MEHVRGKTSEDGTPSVTFPRNFDRVVGLMGHNDLRGPASEQ-----------------NTCDGGGGISEGRALARDGTKDQRAPPSWTKHLLEEGLDRTKTFAKYRGILFAEGEDGKERLMRGLAKMRELDLRLARITERARDLRRIPFGEEENANKVASIPEVT---QATRYTHSQGSVTVGDIASIIP--------SSEAPTAGPPHDAVTLQTSKHSMGTEGKC-----------ESRNDGRCSQAFEGRSAN-KAFMTQKPHRNRFHGAGGGASWTLCTDTRVVLAPRSLDRSDAAISPSPHQDLV---NKVGDEGATSGAGSRS------------------GVSFVLKNKQHAAKVRR-RLTDEQEGLVSRFLIDADGFNDEGGKIGE-PTGVWAEIAPYGGAGASQNTARLAEIDAQVASMRG---LVPDESTSNDKA-------------------------------------------------NHGTSEEKNLPLARKKYF--PGEATLREQHATRQMRQREREIDAALEQVREALFKDS-PGGTRRRENAVDAALEIASSAPLNIQARVRQGVGRVESLLERSGAQPVGEWELKHVLRQSEQELQGKQLASPQRIEELLTTVRRESADGALRADNSLVGTSKTDNHHQHARMECEHNDIPSEIDLETFFSQQEETNDISSVNRDAPPTHGAVDILIGRAKPLNNQGGGLWLRRKGYVRARGITPRDESRDVSGEAEIKIEGKDLQRQSSPLHAGGARENVDTRNPTNMHVEAVTVVASTWQRAQATGHQDSRRPRRNPRNKQHLVTAAGDDVAEAVTSPEIIALFRAPLLAPA-LYPPIAGIAAAAVASGGSNRLK 3095
            ME VR +T EDGTP VTFPRNFD +VGLMG NDL   + +Q                 N+ +GGGG + GR          RAPP WT++LLEEGLDRTK F++YRG+ FAE + G +RLMRGLAK+RELD+RL R+T RAR+L+ +     E A + A++   T   +       +G V V D+ +  P        SSE    GP    V++ +++ S                  +   DG  S + + ++   +AF+TQ      F G      ++    T +     S++ SD     S  Q      + VG  G  SG+ +                     VSFVL+NK++AA+  R RLTDEQE LVSRF+ DADGFND+G   GE P+GVWAEI PYGG G S++ ARLAEI+A++ +MRG   L  D+ T  +K                                                    GT        A   Y   PG+A LREQ A R+ R RER ID ALEQ+R++LFK+S  GG   RE AVDAALE+A SAPL++Q RVR+G GR++SLL   G QPVGEWE+KH LRQ E+EL+GK LAS +RIEE+L TVR+E+A  A  A  S           QH     + +  P    L+ FFS ++   +I       P    A     GR +        L L   G  R     P  E++   G+      G     ++ P  AG  RE   TR P+     AV+   ST       G     RPR  PR K++               PE+ ALFRAPLL P  L PPIAGIAAAAVA+GGS R+K
Sbjct:    1 MEGVRARTREDGTPKVTFPRNFDEIVGLMGRNDLEDRSPDQASAASNRSGYAGKGAGGNSREGGGGKASGRETG------DRAPP-WTQYLLEEGLDRTKEFSRYRGM-FAEEQTGGDRLMRGLAKIRELDVRLLRVTGRARELKLMAREAAEQAERAAAVGIATSKGERALCLKGRGPVAVEDVPTNHPPLRLPLPLSSELAPFGPVSSRVSIGSARKSEAIAXXXXXXXXXXXXXXQHDGDGGASNSRDRQARRGRAFVTQN-----FRGTARTGGYSNAGSTAI-----SVNGSDDNTCSSRAQGFSRGKSGVGSHGGDSGSQNEGRGXXXXXXXXXXXXXXXXXVSFVLRNKRYAARASRGRLTDEQESLVSRFVQDADGFNDDGEPTGEEPSGVWAEITPYGGTGTSEDNARLAEINAKLLAMRGAETLDRDDDTQEEKGAPINASEQQQRSPKTATDIEPARVQNDCGREAPPPXXXXXXXXXXXXXXXSGTKGAAAATAAVPGYATTPGDAALREQRAKREARCRERAIDTALEQLRDSLFKESVAGGRSLREKAVDAALELARSAPLDMQGRVRRGAGRIDSLLGGEGPQPVGEWEVKHALRQGEEELRGKDLASRERIEEILATVRQETA--ATAASRSATNPPPP----QHGSDAIDPDRFPHGTSLDDFFSLKDGPAEIE------PQLAAAA---TGRPR--------LMLPLSGSQRF----PHAEAKHDEGKG-----GAGTSGETPPEQAG--REI--TRGPSTGRSAAVSDEVSTTSGEGPPGAARHARPRL-PRKKKNYTAVP----------PEVAALFRAPLLVPRHLEPPIAGIAAAAVAAGGSRRVK 803          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig737.18612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LIW9_ECTSI3.430e-11137.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig737contigF-serratus_M_contig737:170567..177674 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-20_001870.1
Exons11
Model size3868
Cds size3135
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932234.9033468-UTR-F-serratus_M_contig737:170566..1712851622932234.9033468-UTR-F-serratus_M_contig737:170566..171285Fucus serratus maleUTRF-serratus_M_contig737 170567..171285 -
1690964211.4808927-UTR-F-serratus_M_contig737:170566..1712851690964211.4808927-UTR-F-serratus_M_contig737:170566..171285Fucus serratus maleUTRF-serratus_M_contig737 170567..171285 -
1622932235.179962-UTR-F-serratus_M_contig737:177660..1776741622932235.179962-UTR-F-serratus_M_contig737:177660..177674Fucus serratus maleUTRF-serratus_M_contig737 177661..177674 -
1690964211.6093738-UTR-F-serratus_M_contig737:177660..1776741690964211.6093738-UTR-F-serratus_M_contig737:177660..177674Fucus serratus maleUTRF-serratus_M_contig737 177661..177674 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932234.9236987-CDS-F-serratus_M_contig737:171285..1719691622932234.9236987-CDS-F-serratus_M_contig737:171285..171969Fucus serratus maleCDSF-serratus_M_contig737 171286..171969 -
1690964211.4971144-CDS-F-serratus_M_contig737:171285..1719691690964211.4971144-CDS-F-serratus_M_contig737:171285..171969Fucus serratus maleCDSF-serratus_M_contig737 171286..171969 -
1622932234.9472594-CDS-F-serratus_M_contig737:172240..1724141622932234.9472594-CDS-F-serratus_M_contig737:172240..172414Fucus serratus maleCDSF-serratus_M_contig737 172241..172414 -
1690964211.5076437-CDS-F-serratus_M_contig737:172240..1724141690964211.5076437-CDS-F-serratus_M_contig737:172240..172414Fucus serratus maleCDSF-serratus_M_contig737 172241..172414 -
1622932234.9642072-CDS-F-serratus_M_contig737:172854..1730221622932234.9642072-CDS-F-serratus_M_contig737:172854..173022Fucus serratus maleCDSF-serratus_M_contig737 172855..173022 -
1690964211.5194476-CDS-F-serratus_M_contig737:172854..1730221690964211.5194476-CDS-F-serratus_M_contig737:172854..173022Fucus serratus maleCDSF-serratus_M_contig737 172855..173022 -
1622932234.9829493-CDS-F-serratus_M_contig737:173213..1733591622932234.9829493-CDS-F-serratus_M_contig737:173213..173359Fucus serratus maleCDSF-serratus_M_contig737 173214..173359 -
1690964211.5298405-CDS-F-serratus_M_contig737:173213..1733591690964211.5298405-CDS-F-serratus_M_contig737:173213..173359Fucus serratus maleCDSF-serratus_M_contig737 173214..173359 -
1622932235.0020912-CDS-F-serratus_M_contig737:173605..1736731622932235.0020912-CDS-F-serratus_M_contig737:173605..173673Fucus serratus maleCDSF-serratus_M_contig737 173606..173673 -
1690964211.5386317-CDS-F-serratus_M_contig737:173605..1736731690964211.5386317-CDS-F-serratus_M_contig737:173605..173673Fucus serratus maleCDSF-serratus_M_contig737 173606..173673 -
1622932235.0157616-CDS-F-serratus_M_contig737:173958..1740921622932235.0157616-CDS-F-serratus_M_contig737:173958..174092Fucus serratus maleCDSF-serratus_M_contig737 173959..174092 -
1690964211.5471802-CDS-F-serratus_M_contig737:173958..1740921690964211.5471802-CDS-F-serratus_M_contig737:173958..174092Fucus serratus maleCDSF-serratus_M_contig737 173959..174092 -
1622932235.0423205-CDS-F-serratus_M_contig737:174587..1748421622932235.0423205-CDS-F-serratus_M_contig737:174587..174842Fucus serratus maleCDSF-serratus_M_contig737 174588..174842 -
1690964211.5559506-CDS-F-serratus_M_contig737:174587..1748421690964211.5559506-CDS-F-serratus_M_contig737:174587..174842Fucus serratus maleCDSF-serratus_M_contig737 174588..174842 -
1622932235.0638618-CDS-F-serratus_M_contig737:174976..1752011622932235.0638618-CDS-F-serratus_M_contig737:174976..175201Fucus serratus maleCDSF-serratus_M_contig737 174977..175201 -
1690964211.5652695-CDS-F-serratus_M_contig737:174976..1752011690964211.5652695-CDS-F-serratus_M_contig737:174976..175201Fucus serratus maleCDSF-serratus_M_contig737 174977..175201 -
1622932235.0953963-CDS-F-serratus_M_contig737:175490..1756541622932235.0953963-CDS-F-serratus_M_contig737:175490..175654Fucus serratus maleCDSF-serratus_M_contig737 175491..175654 -
1690964211.575098-CDS-F-serratus_M_contig737:175490..1756541690964211.575098-CDS-F-serratus_M_contig737:175490..175654Fucus serratus maleCDSF-serratus_M_contig737 175491..175654 -
1622932235.1208894-CDS-F-serratus_M_contig737:176292..1765551622932235.1208894-CDS-F-serratus_M_contig737:176292..176555Fucus serratus maleCDSF-serratus_M_contig737 176293..176555 -
1690964211.5854278-CDS-F-serratus_M_contig737:176292..1765551690964211.5854278-CDS-F-serratus_M_contig737:176292..176555Fucus serratus maleCDSF-serratus_M_contig737 176293..176555 -
1622932235.1393938-CDS-F-serratus_M_contig737:176806..1776601622932235.1393938-CDS-F-serratus_M_contig737:176806..177660Fucus serratus maleCDSF-serratus_M_contig737 176807..177660 -
1690964211.598559-CDS-F-serratus_M_contig737:176806..1776601690964211.598559-CDS-F-serratus_M_contig737:176806..177660Fucus serratus maleCDSF-serratus_M_contig737 176807..177660 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig737.18612.1prot_F-serratus_M_contig737.18612.1Fucus serratus malepolypeptideF-serratus_M_contig737 171286..177660 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig737.18612.1

>prot_F-serratus_M_contig737.18612.1 ID=prot_F-serratus_M_contig737.18612.1|Name=mRNA_F-serratus_M_contig737.18612.1|organism=Fucus serratus male|type=polypeptide|length=1045bp
MSFKERRGSMGAAAVEAGAFSGEDDTDQQTPGYSREYLAPEYGYSIPIKT
REGRRAFCDGGGHALAEEEIMVTDEVRHAPRGPHLISCPSESEICEPQAP
SRALHDKGTEFGQASLPSKQLDAGFQRRQLTRPASTGAETQTVRSIADIA
VCAPAFGPSRTWLSPSVSPVARRKASELPEQDVLQQKEKRSSSRSLENFI
SCQGKVTLTSRSDVKYLQSQMERVDRVKDLDKQINVLKSSSPQEKRSLSP
RAGKKVFLSTMNTFDAAYHSVRRDLEQYMEHVRGKTSEDGTPSVTFPRNF
DRVVGLMGHNDLRGPASEQNTCDGGGGISEGRALARDGTKDQRAPPSWTK
HLLEEGLDRTKTFAKYRGILFAEGEDGKERLMRGLAKMRELDLRLARITE
RARDLRRIPFGEEENANKVASIPEVTQATRYTHSQGSVTVGDIASIIPSS
EAPTAGPPHDAVTLQTSKHSMGTEGKCESRNDGRCSQAFEGRSANKAFMT
QKPHRNRFHGAGGGASWTLCTDTRVVLAPRSLDRSDAAISPSPHQDLVNK
VGDEGATSGAGSRSGVSFVLKNKQHAAKVRRRLTDEQEGLVSRFLIDADG
FNDEGGKIGEPTGVWAEIAPYGGAGASQNTARLAEIDAQVASMRGLVPDE
STSNDKANHGTSEEKNLPLARKKYFPGEATLREQHATRQMRQREREIDAA
LEQVREALFKDSPGGTRRRENAVDAALEIASSAPLNIQARVRQGVGRVES
LLERSGAQPVGEWELKHVLRQSEQELQGKQLASPQRIEELLTTVRRESAD
GALRADNSLVGTSKTDNHHQHARMECEHNDIPSEIDLETFFSQQEETNDI
SSVNRDAPPTHGAVDILIGRAKPLNNQGGGLWLRRKGYVRARGITPRDES
RDVSGEAEIKIEGKDLQRQSSPLHAGGARENVDTRNPTNMHVEAVTVVAS
TWQRAQATGHQDSRRPRRNPRNKQHLVTAAGDDVAEAVTSPEIIALFRAP
LLAPALYPPIAGIAAAAVASGGSNRLKNIRGELAGAGRLQPTGS*
back to top

mRNA from alignment at F-serratus_M_contig737:170567..177674-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig737.18612.1 ID=mRNA_F-serratus_M_contig737.18612.1|Name=mRNA_F-serratus_M_contig737.18612.1|organism=Fucus serratus male|type=mRNA|length=7108bp|location=Sequence derived from alignment at F-serratus_M_contig737:170567..177674- (Fucus serratus male)
ATTGGGAACTAGCGATGAGTTTTAAGGAGAGACGTGGTAGTATGGGCGCC GCAGCGGTCGAAGCCGGTGCATTTTCGGGCGAAGACGATACAGATCAACA GACGCCAGGATATTCCCGCGAGTATCTGGCACCGGAATACGGTTATTCCA TCCCAATCAAGACCCGTGAGGGTCGAAGGGCATTCTGTGATGGTGGTGGT CACGCTCTCGCGGAAGAAGAAATAATGGTGACGGATGAAGTGCGTCACGC GCCTAGAGGCCCACATCTCATTTCCTGTCCATCAGAAAGTGAAATATGTG AACCGCAAGCGCCGTCGCGAGCCTTACATGATAAGGGCACAGAATTTGGG CAGGCGTCCCTGCCATCGAAACAGTTGGACGCAGGATTTCAACGTCGACA GCTTACCAGGCCAGCGTCGACCGGCGCTGAAACTCAAACTGTTAGATCTA TAGCTGACATCGCCGTGTGCGCCCCGGCTTTTGGGCCCTCTCGAACGTGG CTTTCCCCATCCGTGAGCCCAGTAGCACGACGAAAAGCTTCAGAGCTACC AGAACAGGATGTCTTGCAGCAAAAAGAAAAACGCAGCAGCAGCAGATCGC TTGAGAATTTTATTTCTTGTCAAGGCAAAGTTACCTTGACGTCACGCAGC GATGTAAAATATCTGCAGAGTCAAATGGAGAGAGTCGACCGAGTAAAAGA TCTCGACAAGCAGATCAACGTCTTAAAAAGTTCTTCGCCCCAAGAAAAAC GTTCACTGTCACCAAGAGCGGGCAAGAAGGTGTTCTTGTCCACCATGAAC ACGTTCGACGCGGCGTATCACAGTGTCCGGAGGGATCTTGAGCAGTACAT GGAACACGTGCGAGGAAAGTGAGGGGTAAATCGACCTTCCACACGAACGG TTCATCCTTGATCTTTTTTCGTATCAGGGATCTAATATGCTCGAATGATG TCTATCGCAGTTATATCGGTACCGCGGTAATCACGAGGGCCATGCCGTAT AAATACTGAACTCGCGGGTTGTATCAAGAGCTTCTGAAAATCACCATTAA TTAGAATGCAGATTATCATGAGCGTACGTTACATCTTTCAGTGCTGATAC CCAAACCATCATCTTCCAGAACGAGCGAAGATGGGACCCCTTCCGTCACT TTCCCGAGGAACTTTGACCGAGTTGTCGGCCTAATGGGCCATAACGACTT GAGGGGACCAGCTTCGGAGCAGAACACGTGCGACGGAGGCGGCGGTATAA GTGAAGGCAGAGCACTCGCAAGAGATGGCACAAAAGATCAAAGGGCTCCG CCCTCTTGGACAAAGCACCTTCTGGAAGAAGGTCTCGATAGGACGAAGAC CTTCGCGAAATACAGAGGCATATTATTTGCAGGCGAGAAGCAGAGTAATG AGAATAACTGTAAACAGATACAGTACGTGAAAGCAGGGGACATCGAGCGC TGAAATACTCATACTTTCTCGTGATTCAGTTTGTGAATGTTCATGGATTG TTGACGATGTAAGTTGGAAGCGATAAACCAAAAGACTGCTGAGTCATGAC TGAGTATTCTAGTGGTTTAGCGCTTTAAACTTACAAAAGATTTGCGCGGA ACAGTGATCTCCGGGGACCTCCCCTCGCCACGCACTGCAGTATCTACAAT GGCCGCAACTAATTTTTTCATTCATACCGGGGATTGAACCGCGAAGAAGC GATAAACCACTAGACTGCTGAGTCATGACTGAGTAGTCTAGTGGTTTAGC GCTTCTAACTTACAGAAAATATCACGTGTGGAAGCTATCGAGGCAGCGGC GACACGGAATATGCTATGTTTGCCTTGAGTTTTGGACGTTGCAACAAGTT TTTTAAAATAAAAAATATGTCCTTAGTTATTTCCTAAAAAAAACAACTGC ACCCTTGCCCACTCCTTTCCACGCAGGCGCAAAGTTGAGCGAGAGTAATT TTTTAGAGTAATTTTTGCCCAATCAAAGTCAAATAACTAGTGTCAGGAAT TTGTATGTCGCGTATCTCAGAGGGTGAGGATGGGAAGGAACGTCTCATGC GGGGCCTAGCGAAGATGAGAGAGCTCGATCTTCGACTAGCAAGGATAACT GAGAGGGCGCGAGACTTGAGGAGAATACCGTTTGGAGAAGAGGAAAACGC AAATAAAGTTGCAAGCATACCCGAGGTTACACAGGTGACACCAACCGACA ACCTGCCCTATTTATTCGCAGGGAACCCGTTTGGCAAATCGAGAGATATT TTTAATATGGGCATATGGTGGCAACCCGCTTGGAGCCAGGAGTTCCCAAC AGTGCTTGAAATTTGTCAGGGATGTCCGCCGGAGTGATAATATTTGTCGA GAATGCCTAAAACACCAACGGTCTTGATAGCGGTTTGAAGCGGGCTTGTA AAAAAATGGGCAAATTCCCCCACTACCTTGAAATTCAAATCGTTGCACGA CCTTGCTGCTTGATTGTCAGTAGGCGACCCGATATACACATAGCCAAGGA TCCGTCACGGTAGGCGATATCGCCAGCATCATTCCATCTTCGGAAGCACC AACAGCGGGTCCTCCACATGATGCCGTGACCCTGCAAACTAGCAAGCATT CAATGGGAACAGAGGGAAAATGCGAGAGCCGAAATGACGGTAGATGCAGT CAAGCGTTCGAAGGACGTTCAGCAAACAAGGCCTTCATGACGCAAAAGTA AGCCCTGGATCTTGGGGGGAGGTGGAGGAAAGGATGGGAGGGTAGCCGCT GGAAGGCGTGGATGCTTAATGTGCAATTACGATCGATATTGGTCACCTGT AGTCGGCCGCCGACCTCGCGCTCCGCTACATGCCGCATCGGAACAGATTT CATGGGGCTGGCGGAGGAGCATCATGGACGCTATGCACCGATACTAGGGT TGTATTGGCGCCACGTTCTTTGGACCGAAGCGATGCCGCTATCAGCCCAA GTCCCCATCAAGACTTAGTAAACAAGGTCGGTGACGAGGGCGCAACCAGT GGCGCGGGCTCCCGTAGCGGCGTTTCTTTCGTGCTGAAGAACAAGCAACA TGCGGCGAAAGTACGCAGAAGGCTCACGGACGAGCAGGTGCTGAACGCCG TAATTTTCTGCGAGATATTTCCCGTAAATAAACTGCAAGGTCTCTCACGG CTAGTTATGGTAAATTCACTGTCACTTATCCCAGACCGTAGTTGAAAGTA CATAGAGTACAATTGATTAAAAACTATAAAGTCCTCTCTGCCTAATTTTT TCGGCCGTACAGACACGAATACACCGCGACAAGCTACGTCCCCAAAAAGG TTCTAGCGGGATACGTTCATGCGCCGACTGGTTTCATTGACTGCGTCATT GTAGAGCGAAGAAACTAATCTCGGCAGGATGGTGGGTGTAAAATATTAAG CCTACGGCTGCTTAGGCTCGTGTTCTTCCATTGTATTTGTTCGGTGGCAA TCAAGCCTTTAGACGCAGCCGTGTTCTATTCGCTGCACATTTGTACTGCG AGGTAAGCACGTGCAGTTTTGGGTCCCTTTGGCACCTTCGTAGCGTCGAT GGTGTGCCACTCACTGCTTTGCGTGATGACAGGAGGGTTTGGTGTCCCGA TTCCTCATCGATGCTGATGGGTTCAACGACGAGGGCGGAAAGATCGGCGA ACCGACTGGCGTATGGGCCGAGATAGCGCCGTACGGTGGAGCAGGCGCGA GTCAAAATACTGCAAGGTATCGTTGTGGACGGGTGATTCCAATTATAGAA AAGAGAGCAAAACATATTGACTCGGAACATGCACAGTACTGGTTGAGATT TCGGTGTGCCTGGTGTCATAAATCGACAAAAACCATCAGGTGGTGAGCCA ACCCAGAGACTTTCCCATTCGACATGATGACAAGTATCCACGGAACAAAC CGGGAACATCCTTGTATTGCAAAAACGGGTATATAACTTGTCCCAGTAGA TCTTCCTCAATCACTTCGCGCTGGTGCCTGTCGAACTCGGCTCGCGCACA GATTAGCCGAAATCGATGCTCAAGTTGCATCCATGCGTGGTCTGGTTCCG GACGAAAGCACGAGCAACGGTCAGTCAATCACTTGACGAAATACGTCTGC CTCGTTTCGAGTCATCACCTGAAATCCGATCGCATTCTTCACGACTCAGC AAATGTTGTACAAGTTTGGCGGGAGACCCACCCTCCCAACACCCAACTTC TACGTCCACCACCCCATGAGAGGAGAGCCTCTCACAACCGAAACGCCACT TAACTCTCCTCCTGCTACTCTCGATCTTAATGCCTTGATGTAACTTTGCT GATCCGAAACAAAAGACAAAGCTAATCACGGAACCTCGGAAGAGAAGAAT TTACCTCTCGCGAGAAAGAAGTATTTTCCAGGCGAGGCCACCTTGCGGGA GCAGCACGCCACTCGGCAGATGCGGCAGCGGGAGCGGGAGATCGACGCCG CGTTAGAGCAGGTACGGTGACCGCGTGGAGTTGCTACTGTTGAAAACTCG ATTCAATCCGTTGTCTGTCCCAGTCTTGCAGATTTCCTGTCAGATGTGTG ATTTGAGCCATTGTTTGTGACAATGTCACCTATTCCGCGTTAACAAAGTG AAGCTCTAACTCTTTTGTGGAACACTCGGTACATGTCTCCTGCTGAGTTT AGGTTCGCGAGGCCCTTTTCAAGGACTCACCGGGGGGAACAAGAAGAAGA GAGAACGCAGTAGACGCAGCGCTTGAAATAGCCAGCTCAGCGCCATTGAA TATTCAAGCCAGGGTTAGGCAAGGCGTGGGCCGTGTGGAATCACTACTCG AAAGAAGCGGTGCTCAGCCGGTGAGGAAGGAGGAGCTTGAGACCATCCAT CTGTAACATATTTAGATCTGACAGCGTCGACTTATCATTTTTTGTTGCAA TGAAAATATGTGGGGCCGTGATACGCTTCTCAGCGGTGGGAATGAGGAAG CAAGGACAGGCGGGCGCCACTCAAGGTACTTTGGCCCCACTCATTCACGT GGGAGATCTTGAACGTATGCTCAACGGGGACGGAGAAACCATGGTGTGCG CGCACACAGCAAGTTAAAGTCATGCGGGCATAACGTCAGGGGGACTTGGA TATTCTAACCGAAAGAGCGATCGCTGTCTTGAGCGTTCGCAGAACTGTCG CTATGCCATCTGGCCCAACCACCCAATAGCCCCGGTTTCAAGCATATGCA TCATGCTGTCGTCACCCACCGGACAATATCAAGTGTACATGGTTTCGGCA TCCAACACAGGTCGGAGAATGGGAGTTGAAGCACGTCCTGAGGCAGAGCG AGCAGGAGCTGCAGGGCAAGCAACTGGCGAGTCCACAGCGCATAGAAGAG CTGCTCACGACTGTGCGTCGCGAGTCCGCTGATGGTGCGCTGCGCGCCGA CAACAGTTTGGTTGGCACTTCCAAGACAGACAATGTAAGAACGAGTTGTT GGATCTTGAGTACAAAGGCCCTTTCTATCTGGCGCTTAGGTTGGAAGACG CGTTTTCGCTTTCATGCATGTAGTAGGATGTTAAATAGTGAATGGGCACT TCCTTCAATCAGTTTGCAGGGTAACGTTAGTTGAGAAAGCCAGTTTCCAT GGTTCACAATGACGCGCAAAGATCATTTTTCTGCCCCCAAATTACCACCC CCCTCCAACCCTCGGCGCCTTAACCTCATTGCGTTGCACGTTGCCTTTCG TGTAGCACCACCAACACGCGCGAATGGAGTGCGAGCACAACGACATCCCG TCGGAGATCGATCTCGAAACCTTCTTCTCGCAACAAGAGGAAACAAATGA TATATCTAGTGTCAACAGAGATGCACCCCCTACGCACGGTGCCGTCGACA TCTTGATCGGGAGGGCTAAGCCCCTGAACAATCAAGGTGGAGGTTTATGG CTTCGGCGCAAGGGGTATGTTCGGGCAAGGGGTATCACGCCGCGGGATGA GTCGCGAGATGTAAGCGGGGAGGCAGAAATCAAAATCGAAGGGAAGGATC TACAAAGGCAGTCGTCGCCCTTGCACGCGGGAGGAGCACGGGAAAATGTT GATACCAGAAACCCAACAAATATGCATGTTGAGGCTGTGACGGTTGTTGC ATCTACCTGGCAGAGGGCCCAAGCGACGGGCCACCAAGATAGTCGACGCC CTAGGCGAAACCCCAGAAATAAACAGCATCTAGTAACTGCTGCTGGAGAT GATGTCGCGGAAGCGGTTACTTCTCCGGAAATCATAGCGCTATTTCGGGC CCCTCTTCTCGCTCCAGCCCTCTATCCACCGATCGCTGGCATTGCAGCAG CGGCGGTGGCTTCAGGTGGTTCGAATCGCCTTAAAAACATAAGGGGGGAG CTAGCTGGTGCTGGGCGACTGCAACCAACTGGGAGTTAGCATGCGGGTCC GCGGGTCTGAGAGACGATTGTCTGTGTGTACTGTCGGGAGATACGTTGCA TCGTCTTTTGTATTAATAGTCAAGCGAGATCAAGTGCGTTTGATGGTTGA GTTTTTTTACTCAAAAGCCATGGTTCTTATGACAATGATCAGGCACGGTG CCCTCGAAATATACAGTTAAGTCGCCCACTGCCCGATGGGTCACTTTCGA GGGACTACCCCCTGGGATAGGGATATATTTCTATTGTTTTCTCCGCAGCA GCGCAATGACGTGATGACGTATACGAAATAATGGGGTGATGGATCGATAC CACGGAGTTCTTAGTTATTGACGAGGTACCTTTCTGTGCTATTCTCCATC ATAATTCGGAGAAACGTATAACAATGATGAAGCACTATTAATAGTAGGGC TATGCCTGTGACGCCGGGAAAGATGTATTTGATGAAGTGCGAGGACCTCA CTTTTGCATGATGTGTAAATATTCAAGGGCGTCAAATACTGCTAGCGCAG TACTCCGGCCAAAAAAATGGGTCTATCGGGTAAACCGTCAAAATTCAAGA CGGAGTAATACAATACAGCCATCTACTACACTCGTACGTAGGAAGGCGTT GTCAATCCTCCCGCCCAAGGTATGAAAGCACCAGTAGTCGTAGTTTAACA AGAAGATGCTTCACGCTAAAACGACAACAGCGAAGAAGGGTAGCAGAGCA GATCACCT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig737:170567..177674-

>mRNA_F-serratus_M_contig737.18612.1 ID=mRNA_F-serratus_M_contig737.18612.1|Name=mRNA_F-serratus_M_contig737.18612.1|organism=Fucus serratus male|type=CDS|length=6270bp|location=Sequence derived from alignment at F-serratus_M_contig737:170567..177674- (Fucus serratus male)
ATGAGTTTTAAGGAGAGACGTGGTAGTATGGGCGCCGCAGCGGTCGAAGC
CGGTGCATTTTCGGGCGAAGACGATACAGATCAACAGACGCCAGGATATT
CCCGCGAGTATCTGGCACCGGAATACGGTTATTCCATCCCAATCAAGACC
CGTGAGGGTCGAAGGGCATTCTGTGATGGTGGTGGTCACGCTCTCGCGGA
AGAAGAAATAATGGTGACGGATGAAGTGCGTCACGCGCCTAGAGGCCCAC
ATCTCATTTCCTGTCCATCAGAAAGTGAAATATGTGAACCGCAAGCGCCG
TCGCGAGCCTTACATGATAAGGGCACAGAATTTGGGCAGGCGTCCCTGCC
ATCGAAACAGTTGGACGCAGGATTTCAACGTCGACAGCTTACCAGGCCAG
CGTCGACCGGCGCTGAAACTCAAACTGTTAGATCTATAGCTGACATCGCC
GTGTGCGCCCCGGCTTTTGGGCCCTCTCGAACGTGGCTTTCCCCATCCGT
GAGCCCAGTAGCACGACGAAAAGCTTCAGAGCTACCAGAACAGGATGTCT
TGCAGCAAAAAGAAAAACGCAGCAGCAGCAGATCGCTTGAGAATTTTATT
TCTTGTCAAGGCAAAGTTACCTTGACGTCACGCAGCGATGTAAAATATCT
GCAGAGTCAAATGGAGAGAGTCGACCGAGTAAAAGATCTCGACAAGCAGA
TCAACGTCTTAAAAAGTTCTTCGCCCCAAGAAAAACGTTCACTGTCACCA
AGAGCGGGCAAGAAGGTGTTCTTGTCCACCATGAACACGTTCGACGCGGC
GTATCACAGTGTCCGGAGGGATCTTGAGCAGTACATGGAACACGTGCGAG
GAAAATGAGTTTTAAGGAGAGACGTGGTAGTATGGGCGCCGCAGCGGTCG
AAGCCGGTGCATTTTCGGGCGAAGACGATACAGATCAACAGACGCCAGGA
TATTCCCGCGAGTATCTGGCACCGGAATACGGTTATTCCATCCCAATCAA
GACCCGTGAGGGTCGAAGGGCATTCTGTGATGGTGGTGGTCACGCTCTCG
CGGAAGAAGAAATAATGGTGACGGATGAAGTGCGTCACGCGCCTAGAGGC
CCACATCTCATTTCCTGTCCATCAGAAAGTGAAATATGTGAACCGCAAGC
GCCGTCGCGAGCCTTACATGATAAGGGCACAGAATTTGGGCAGGCGTCCC
TGCCATCGAAACAGTTGGACGCAGGATTTCAACGTCGACAGCTTACCAGG
CCAGCGTCGACCGGCGCTGAAACTCAAACTGTTAGATCTATAGCTGACAT
CGCCGTGTGCGCCCCGGCTTTTGGGCCCTCTCGAACGTGGCTTTCCCCAT
CCGTGAGCCCAGTAGCACGACGAAAAGCTTCAGAGCTACCAGAACAGGAT
GTCTTGCAGCAAAAAGAAAAACGCAGCAGCAGCAGATCGCTTGAGAATTT
TATTTCTTGTCAAGGCAAAGTTACCTTGACGTCACGCAGCGATGTAAAAT
ATCTGCAGAGTCAAATGGAGAGAGTCGACCGAGTAAAAGATCTCGACAAG
CAGATCAACGTCTTAAAAAGTTCTTCGCCCCAAGAAAAACGTTCACTGTC
ACCAAGAGCGGGCAAGAAGGTGTTCTTGTCCACCATGAACACGTTCGACG
CGGCGTATCACAGTGTCCGGAGGGATCTTGAGCAGTACATGGAACACGTG
CGAGGAAAAACGAGCGAAGATGGGACCCCTTCCGTCACTTTCCCGAGGAA
CTTTGACCGAGTTGTCGGCCTAATGGGCCATAACGACTTGAGGGGACCAG
CTTCGGAGCAGAACACGTGCGACGGAGGCGGCGGTATAAGTGAAGGCAGA
GCACTCGCAAGAGATGGCACAAAAGATCAAAGGGCTCCGCCCTCTTGGAC
AAAGCACCTTCTGGAAGAAGGTCTCGATAGGACGAAGACCTTCGCGAAAT
ACAGAGGCATATTATTTGCAGAACGAGCGAAGATGGGACCCCTTCCGTCA
CTTTCCCGAGGAACTTTGACCGAGTTGTCGGCCTAATGGGCCATAACGAC
TTGAGGGGACCAGCTTCGGAGCAGAACACGTGCGACGGAGGCGGCGGTAT
AAGTGAAGGCAGAGCACTCGCAAGAGATGGCACAAAAGATCAAAGGGCTC
CGCCCTCTTGGACAAAGCACCTTCTGGAAGAAGGTCTCGATAGGACGAAG
ACCTTCGCGAAATACAGAGGCATATTATTTGCAGAGGGTGAGGATGGGAA
GGAACGTCTCATGCGGGGCCTAGCGAAGATGAGAGAGCTCGATCTTCGAC
TAGCAAGGATAACTGAGAGGGCGCGAGACTTGAGGAGAATACCGTTTGGA
GAAGAGGAAAACGCAAATAAAGTTGCAAGCATACCCGAGGTTACACAGAG
GGTGAGGATGGGAAGGAACGTCTCATGCGGGGCCTAGCGAAGATGAGAGA
GCTCGATCTTCGACTAGCAAGGATAACTGAGAGGGCGCGAGACTTGAGGA
GAATACCGTTTGGAGAAGAGGAAAACGCAAATAAAGTTGCAAGCATACCC
GAGGTTACACAGGCGACCCGATATACACATAGCCAAGGATCCGTCACGGT
AGGCGATATCGCCAGCATCATTCCATCTTCGGAAGCACCAACAGCGGGTC
CTCCACATGATGCCGTGACCCTGCAAACTAGCAAGCATTCAATGGGAACA
GAGGGAAAATGCGAGAGCCGAAATGACGGTAGATGCAGTCAAGCGTTCGA
AGGACGTTCAGCAAACAAGGCCTTCATGACGCAAAAGGCGACCCGATATA
CACATAGCCAAGGATCCGTCACGGTAGGCGATATCGCCAGCATCATTCCA
TCTTCGGAAGCACCAACAGCGGGTCCTCCACATGATGCCGTGACCCTGCA
AACTAGCAAGCATTCAATGGGAACAGAGGGAAAATGCGAGAGCCGAAATG
ACGGTAGATGCAGTCAAGCGTTCGAAGGACGTTCAGCAAACAAGGCCTTC
ATGACGCAAAAGCCGCATCGGAACAGATTTCATGGGGCTGGCGGAGGAGC
ATCATGGACGCTATGCACCGATACTAGGGTTGTATTGGCGCCACGTTCTT
TGGACCGAAGCGATGCCGCTATCAGCCCAAGTCCCCATCAAGACTTAGTA
AACAAGGTCGGTGACGAGGGCGCAACCAGTGGCGCGGGCTCCCGTAGCGG
CGTTTCTTTCGTGCTGAAGAACAAGCAACATGCGGCGAAAGTACGCAGAA
GGCTCACGGACGAGCAGCCGCATCGGAACAGATTTCATGGGGCTGGCGGA
GGAGCATCATGGACGCTATGCACCGATACTAGGGTTGTATTGGCGCCACG
TTCTTTGGACCGAAGCGATGCCGCTATCAGCCCAAGTCCCCATCAAGACT
TAGTAAACAAGGTCGGTGACGAGGGCGCAACCAGTGGCGCGGGCTCCCGT
AGCGGCGTTTCTTTCGTGCTGAAGAACAAGCAACATGCGGCGAAAGTACG
CAGAAGGCTCACGGACGAGCAGGAGGGTTTGGTGTCCCGATTCCTCATCG
ATGCTGATGGGTTCAACGACGAGGGCGGAAAGATCGGCGAACCGACTGGC
GTATGGGCCGAGATAGCGCCGTACGGTGGAGCAGGCGCGAGTCAAAATAC
TGCAAGGAGGGTTTGGTGTCCCGATTCCTCATCGATGCTGATGGGTTCAA
CGACGAGGGCGGAAAGATCGGCGAACCGACTGGCGTATGGGCCGAGATAG
CGCCGTACGGTGGAGCAGGCGCGAGTCAAAATACTGCAAGATTAGCCGAA
ATCGATGCTCAAGTTGCATCCATGCGTGGTCTGGTTCCGGACGAAAGCAC
GAGCAACGATTAGCCGAAATCGATGCTCAAGTTGCATCCATGCGTGGTCT
GGTTCCGGACGAAAGCACGAGCAACGACAAAGCTAATCACGGAACCTCGG
AAGAGAAGAATTTACCTCTCGCGAGAAAGAAGTATTTTCCAGGCGAGGCC
ACCTTGCGGGAGCAGCACGCCACTCGGCAGATGCGGCAGCGGGAGCGGGA
GATCGACGCCGCGTTAGAGCAGACAAAGCTAATCACGGAACCTCGGAAGA
GAAGAATTTACCTCTCGCGAGAAAGAAGTATTTTCCAGGCGAGGCCACCT
TGCGGGAGCAGCACGCCACTCGGCAGATGCGGCAGCGGGAGCGGGAGATC
GACGCCGCGTTAGAGCAGGTTCGCGAGGCCCTTTTCAAGGACTCACCGGG
GGGAACAAGAAGAAGAGAGAACGCAGTAGACGCAGCGCTTGAAATAGCCA
GCTCAGCGCCATTGAATATTCAAGCCAGGGTTAGGCAAGGCGTGGGCCGT
GTGGAATCACTACTCGAAAGAAGCGGTGCTCAGCCGGTTCGCGAGGCCCT
TTTCAAGGACTCACCGGGGGGAACAAGAAGAAGAGAGAACGCAGTAGACG
CAGCGCTTGAAATAGCCAGCTCAGCGCCATTGAATATTCAAGCCAGGGTT
AGGCAAGGCGTGGGCCGTGTGGAATCACTACTCGAAAGAAGCGGTGCTCA
GCCGGTCGGAGAATGGGAGTTGAAGCACGTCCTGAGGCAGAGCGAGCAGG
AGCTGCAGGGCAAGCAACTGGCGAGTCCACAGCGCATAGAAGAGCTGCTC
ACGACTGTGCGTCGCGAGTCCGCTGATGGTGCGCTGCGCGCCGACAACAG
TTTGGTTGGCACTTCCAAGACAGACAATGTCGGAGAATGGGAGTTGAAGC
ACGTCCTGAGGCAGAGCGAGCAGGAGCTGCAGGGCAAGCAACTGGCGAGT
CCACAGCGCATAGAAGAGCTGCTCACGACTGTGCGTCGCGAGTCCGCTGA
TGGTGCGCTGCGCGCCGACAACAGTTTGGTTGGCACTTCCAAGACAGACA
ATCACCACCAACACGCGCGAATGGAGTGCGAGCACAACGACATCCCGTCG
GAGATCGATCTCGAAACCTTCTTCTCGCAACAAGAGGAAACAAATGATAT
ATCTAGTGTCAACAGAGATGCACCCCCTACGCACGGTGCCGTCGACATCT
TGATCGGGAGGGCTAAGCCCCTGAACAATCAAGGTGGAGGTTTATGGCTT
CGGCGCAAGGGGTATGTTCGGGCAAGGGGTATCACGCCGCGGGATGAGTC
GCGAGATGTAAGCGGGGAGGCAGAAATCAAAATCGAAGGGAAGGATCTAC
AAAGGCAGTCGTCGCCCTTGCACGCGGGAGGAGCACGGGAAAATGTTGAT
ACCAGAAACCCAACAAATATGCATGTTGAGGCTGTGACGGTTGTTGCATC
TACCTGGCAGAGGGCCCAAGCGACGGGCCACCAAGATAGTCGACGCCCTA
GGCGAAACCCCAGAAATAAACAGCATCTAGTAACTGCTGCTGGAGATGAT
GTCGCGGAAGCGGTTACTTCTCCGGAAATCATAGCGCTATTTCGGGCCCC
TCTTCTCGCTCCAGCCCTCTATCCACCGATCGCTGGCATTGCAGCAGCGG
CGGTGGCTTCAGGTGGTTCGAATCGCCTTAAAAACATAAGGGGGGAGCTA
GCTGGTGCTGGGCGACTGCAACCAACTGGGAGTTAGCACCACCAACACGC
GCGAATGGAGTGCGAGCACAACGACATCCCGTCGGAGATCGATCTCGAAA
CCTTCTTCTCGCAACAAGAGGAAACAAATGATATATCTAGTGTCAACAGA
GATGCACCCCCTACGCACGGTGCCGTCGACATCTTGATCGGGAGGGCTAA
GCCCCTGAACAATCAAGGTGGAGGTTTATGGCTTCGGCGCAAGGGGTATG
TTCGGGCAAGGGGTATCACGCCGCGGGATGAGTCGCGAGATGTAAGCGGG
GAGGCAGAAATCAAAATCGAAGGGAAGGATCTACAAAGGCAGTCGTCGCC
CTTGCACGCGGGAGGAGCACGGGAAAATGTTGATACCAGAAACCCAACAA
ATATGCATGTTGAGGCTGTGACGGTTGTTGCATCTACCTGGCAGAGGGCC
CAAGCGACGGGCCACCAAGATAGTCGACGCCCTAGGCGAAACCCCAGAAA
TAAACAGCATCTAGTAACTGCTGCTGGAGATGATGTCGCGGAAGCGGTTA
CTTCTCCGGAAATCATAGCGCTATTTCGGGCCCCTCTTCTCGCTCCAGCC
CTCTATCCACCGATCGCTGGCATTGCAGCAGCGGCGGTGGCTTCAGGTGG
TTCGAATCGCCTTAAAAACATAAGGGGGGAGCTAGCTGGTGCTGGGCGAC
TGCAACCAACTGGGAGTTAG
back to top