mRNA_F-serratus_M_contig737.18612.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig737.18612.1 vs. uniprot
Match: D8LIW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIW9_ECTSI) HSP 1 Score: 378 bits (971), Expect = 3.430e-111 Identity = 329/868 (37.90%), Postives = 429/868 (49.42%), Query Frame = 3
Query: 849 MEHVRGKTSEDGTPSVTFPRNFDRVVGLMGHNDLRGPASEQ-----------------NTCDGGGGISEGRALARDGTKDQRAPPSWTKHLLEEGLDRTKTFAKYRGILFAEGEDGKERLMRGLAKMRELDLRLARITERARDLRRIPFGEEENANKVASIPEVT---QATRYTHSQGSVTVGDIASIIP--------SSEAPTAGPPHDAVTLQTSKHSMGTEGKC-----------ESRNDGRCSQAFEGRSAN-KAFMTQKPHRNRFHGAGGGASWTLCTDTRVVLAPRSLDRSDAAISPSPHQDLV---NKVGDEGATSGAGSRS------------------GVSFVLKNKQHAAKVRR-RLTDEQEGLVSRFLIDADGFNDEGGKIGE-PTGVWAEIAPYGGAGASQNTARLAEIDAQVASMRG---LVPDESTSNDKA-------------------------------------------------NHGTSEEKNLPLARKKYF--PGEATLREQHATRQMRQREREIDAALEQVREALFKDS-PGGTRRRENAVDAALEIASSAPLNIQARVRQGVGRVESLLERSGAQPVGEWELKHVLRQSEQELQGKQLASPQRIEELLTTVRRESADGALRADNSLVGTSKTDNHHQHARMECEHNDIPSEIDLETFFSQQEETNDISSVNRDAPPTHGAVDILIGRAKPLNNQGGGLWLRRKGYVRARGITPRDESRDVSGEAEIKIEGKDLQRQSSPLHAGGARENVDTRNPTNMHVEAVTVVASTWQRAQATGHQDSRRPRRNPRNKQHLVTAAGDDVAEAVTSPEIIALFRAPLLAPA-LYPPIAGIAAAAVASGGSNRLK 3095
ME VR +T EDGTP VTFPRNFD +VGLMG NDL + +Q N+ +GGGG + GR RAPP WT++LLEEGLDRTK F++YRG+ FAE + G +RLMRGLAK+RELD+RL R+T RAR+L+ + E A + A++ T + +G V V D+ + P SSE GP V++ +++ S + DG S + + ++ +AF+TQ F G ++ T + S++ SD S Q + VG G SG+ + VSFVL+NK++AA+ R RLTDEQE LVSRF+ DADGFND+G GE P+GVWAEI PYGG G S++ ARLAEI+A++ +MRG L D+ T +K GT A Y PG+A LREQ A R+ R RER ID ALEQ+R++LFK+S GG RE AVDAALE+A SAPL++Q RVR+G GR++SLL G QPVGEWE+KH LRQ E+EL+GK LAS +RIEE+L TVR+E+A A A S QH + + P L+ FFS ++ +I P A GR + L L G R P E++ G+ G ++ P AG RE TR P+ AV+ ST G RPR PR K++ PE+ ALFRAPLL P L PPIAGIAAAAVA+GGS R+K
Sbjct: 1 MEGVRARTREDGTPKVTFPRNFDEIVGLMGRNDLEDRSPDQASAASNRSGYAGKGAGGNSREGGGGKASGRETG------DRAPP-WTQYLLEEGLDRTKEFSRYRGM-FAEEQTGGDRLMRGLAKIRELDVRLLRVTGRARELKLMAREAAEQAERAAAVGIATSKGERALCLKGRGPVAVEDVPTNHPPLRLPLPLSSELAPFGPVSSRVSIGSARKSEAIAXXXXXXXXXXXXXXQHDGDGGASNSRDRQARRGRAFVTQN-----FRGTARTGGYSNAGSTAI-----SVNGSDDNTCSSRAQGFSRGKSGVGSHGGDSGSQNEGRGXXXXXXXXXXXXXXXXXVSFVLRNKRYAARASRGRLTDEQESLVSRFVQDADGFNDDGEPTGEEPSGVWAEITPYGGTGTSEDNARLAEINAKLLAMRGAETLDRDDDTQEEKGAPINASEQQQRSPKTATDIEPARVQNDCGREAPPPXXXXXXXXXXXXXXXSGTKGAAAATAAVPGYATTPGDAALREQRAKREARCRERAIDTALEQLRDSLFKESVAGGRSLREKAVDAALELARSAPLDMQGRVRRGAGRIDSLLGGEGPQPVGEWEVKHALRQGEEELRGKDLASRERIEEILATVRQETA--ATAASRSATNPPPP----QHGSDAIDPDRFPHGTSLDDFFSLKDGPAEIE------PQLAAAA---TGRPR--------LMLPLSGSQRF----PHAEAKHDEGKG-----GAGTSGETPPEQAG--REI--TRGPSTGRSAAVSDEVSTTSGEGPPGAARHARPRL-PRKKKNYTAVP----------PEVAALFRAPLLVPRHLEPPIAGIAAAAVAAGGSRRVK 803 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig737.18612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig737.18612.1 >prot_F-serratus_M_contig737.18612.1 ID=prot_F-serratus_M_contig737.18612.1|Name=mRNA_F-serratus_M_contig737.18612.1|organism=Fucus serratus male|type=polypeptide|length=1045bp MSFKERRGSMGAAAVEAGAFSGEDDTDQQTPGYSREYLAPEYGYSIPIKTback to top mRNA from alignment at F-serratus_M_contig737:170567..177674- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig737.18612.1 ID=mRNA_F-serratus_M_contig737.18612.1|Name=mRNA_F-serratus_M_contig737.18612.1|organism=Fucus serratus male|type=mRNA|length=7108bp|location=Sequence derived from alignment at F-serratus_M_contig737:170567..177674- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig737:170567..177674- >mRNA_F-serratus_M_contig737.18612.1 ID=mRNA_F-serratus_M_contig737.18612.1|Name=mRNA_F-serratus_M_contig737.18612.1|organism=Fucus serratus male|type=CDS|length=6270bp|location=Sequence derived from alignment at F-serratus_M_contig737:170567..177674- (Fucus serratus male)back to top |