mRNA_F-serratus_M_contig737.18618.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig737.18618.1
Unique NamemRNA_F-serratus_M_contig737.18618.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig737.18618.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig737contigF-serratus_M_contig737:337852..339826 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size690
Cds size678
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig737.18618.1prot_F-serratus_M_contig737.18618.1Fucus serratus malepolypeptideF-serratus_M_contig737 337862..339826 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932233.5678954-UTR-F-serratus_M_contig737:337851..3378611622932233.5678954-UTR-F-serratus_M_contig737:337851..337861Fucus serratus maleUTRF-serratus_M_contig737 337852..337861 +
1690964210.8191497-UTR-F-serratus_M_contig737:337851..3378611690964210.8191497-UTR-F-serratus_M_contig737:337851..337861Fucus serratus maleUTRF-serratus_M_contig737 337852..337861 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932233.5832956-CDS-F-serratus_M_contig737:337861..3378821622932233.5832956-CDS-F-serratus_M_contig737:337861..337882Fucus serratus maleCDSF-serratus_M_contig737 337862..337882 +
1690964210.8304906-CDS-F-serratus_M_contig737:337861..3378821690964210.8304906-CDS-F-serratus_M_contig737:337861..337882Fucus serratus maleCDSF-serratus_M_contig737 337862..337882 +
1622932233.5982516-CDS-F-serratus_M_contig737:338149..3385621622932233.5982516-CDS-F-serratus_M_contig737:338149..338562Fucus serratus maleCDSF-serratus_M_contig737 338150..338562 +
1690964210.8403313-CDS-F-serratus_M_contig737:338149..3385621690964210.8403313-CDS-F-serratus_M_contig737:338149..338562Fucus serratus maleCDSF-serratus_M_contig737 338150..338562 +
1622932233.6191697-CDS-F-serratus_M_contig737:339304..3395211622932233.6191697-CDS-F-serratus_M_contig737:339304..339521Fucus serratus maleCDSF-serratus_M_contig737 339305..339521 +
1690964210.858249-CDS-F-serratus_M_contig737:339304..3395211690964210.858249-CDS-F-serratus_M_contig737:339304..339521Fucus serratus maleCDSF-serratus_M_contig737 339305..339521 +
1622932233.6330695-CDS-F-serratus_M_contig737:339799..3398261622932233.6330695-CDS-F-serratus_M_contig737:339799..339826Fucus serratus maleCDSF-serratus_M_contig737 339800..339826 +
1690964210.8741078-CDS-F-serratus_M_contig737:339799..3398261690964210.8741078-CDS-F-serratus_M_contig737:339799..339826Fucus serratus maleCDSF-serratus_M_contig737 339800..339826 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig737.18618.1

>prot_F-serratus_M_contig737.18618.1 ID=prot_F-serratus_M_contig737.18618.1|Name=mRNA_F-serratus_M_contig737.18618.1|organism=Fucus serratus male|type=polypeptide|length=226bp
MNADEYEIDDWEDLSENSFPSKSCGGKSSNVLPPTQVLHQNVDTNEAPSP
KDLAPLTYPEDPTGIQSSENARTAQRWGSNRARHSRPLTRPPSSLFGSVY
SGPCLRASGGCRGYDARRARPFDPQIKWMLEQGWDDRFASGIRAGFTLFS
ERPRPSLTAPKGWDDPRVVRSMFRPSAGTTTNLMAFPLKRAKFLAAERGG
GTAKRTRYMSHMLGGDKQVEDRRTHT
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mRNA from alignment at F-serratus_M_contig737:337852..339826+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig737.18618.1 ID=mRNA_F-serratus_M_contig737.18618.1|Name=mRNA_F-serratus_M_contig737.18618.1|organism=Fucus serratus male|type=mRNA|length=1975bp|location=Sequence derived from alignment at F-serratus_M_contig737:337852..339826+ (Fucus serratus male)
GTTTTTTGCCATGAATGCTGACGAATACGAGGTGAGGGCTCACCCAGGCA
AAGAGCATCACCCAAGGCTATGGAAACTAGCTCGTGTTGCCGGATAAAGA
TACTCGTAGACGAAGTAACAAATAAATTACCACGTGCAGTATGTTTTTCT
CAATAATCGCGCGGAACATGTCCAAGATCATGAAGATCAATGATGACGAC
ACAACGATACAAGTACGTCGAACTCCGGACACGAACATGAATTATTTATA
TGACCAAAACAACAATTTAACACGAGCTCTCGCCGCTGCCATAACCAGAT
CGACGATTGGGAGGATCTCTCCGAAAACTCGTTTCCCTCCAAATCATGTG
GGGGTAAAAGCTCGAACGTACTTCCTCCGACTCAAGTCTTGCACCAAAAT
GTAGATACAAACGAAGCTCCGTCACCCAAGGACTTGGCCCCACTAACGTA
CCCAGAAGACCCAACCGGCATTCAAAGCTCTGAGAACGCGCGAACGGCCC
AGCGTTGGGGCTCGAACCGAGCAAGGCATTCTCGACCACTTACAAGACCT
CCGTCATCGCTGTTTGGCTCAGTCTACTCTGGCCCTTGTTTGAGGGCCAG
CGGGGGGTGTAGGGGTTACGACGCCAGAAGGGCAAGACCGTTTGATCCTC
AGATCAAATGGATGCTGGAGCAAGGTTGGGACGACAGGTTCGCTTCGGGG
ATACGTGCAGGGTAAGGGAGATGTTTTCCCTGGTTACAGCCGTTCAACAC
CGTTCGTTAGGTATATCAATTAGTTTGCCTAACGCTATATCGGTAACACG
GGCTTACAAGTTACGCGCGCGAGCCAGAAGATATGTTCTACAGTATTTTA
GTAGCATCTATCTCCGCTTTTTCTTGACCGATGGCAAATATGCACTGTTA
ATATTAATATTTGTATAATTGTAATATGTCGCACGTGGTTCCTTTGAGTT
CTACTCGTATGTGCCCGGGTCCAACTACTACTAGTAAATACTGTACTGGT
AGTAAATTTACGGCCCGTAATCTACTAATAGGTGAAGCTTCATTCGGGTT
GTGCCTGGCCGAAAAAATCGTAACTAAGTTACATCGCTCTAGAACGCAAA
ATCCAGCATTAGCTTCATCTTTGCGATAGAGAAAGGTACAAAGCGAAACA
GTGCCATCGTGAAATCGCTGCTTGGATACGCGAGGGTCATATGTAGAGAT
ACAGAGGGGGCTTGTCAGTTGAAACATCAATCAGAGGTCTACTGTTCTTG
GGGCGTTAGATTCCAAGACAAGTCGAGCTCCACCGTGTCACGAGAAACAG
GTCCATCAAAGTCTGCCGAAAGTCGTTGACCGTGATTGATATTTGACACC
CTGGTTAAAAAACATGAAATTTACAGTTGGCTCTCAAACACCGTGCTCCA
CACGTTTACCTCCCTCCAACTCGTTAATTGCTGTGATTGTATGTTCTTGC
CAGCTTTACTCTGTTCTCAGAGCGGCCCCGTCCAAGTTTAACGGCTCCTA
AAGGATGGGACGATCCTAGAGTAGTACGTTCCATGTTTAGACCGTCTGCG
GGAACGACGACGAACCTAATGGCGTTCCCGTTGAAGCGGGCCAAATTCCT
TGCCGCGGAAAGGGGAGGCGGAACAGCAAAACGAACACGATATATGTCCC
ACATGTTGGGAGGTGACAAGGTGCAAGATTTACGTCGCGGCCGCTCGCAG
CTTGATGCGTATCCAACGCATACCGATGGGATGGATGAGACGTACCAACT
CGTCGTAGTGTATCGCATTCTAAGAAAAACAAATCGAACCGATATATTTC
GCTTGCTTTTGCAGCACTTCCTTGACGGCAATTCGAATTGAATAAAGAAA
GCGTTGACCCGTACCGGGTACGATACGTCTTTCACAGTGTATCAAAATTT
GAGTTGCCAACACAGACTGGCCCCGTGTCATGATGCACGATCGAGCAGCA
GGTAGAAGATCGTCGAACTCATACA
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Coding sequence (CDS) from alignment at F-serratus_M_contig737:337852..339826+

>mRNA_F-serratus_M_contig737.18618.1 ID=mRNA_F-serratus_M_contig737.18618.1|Name=mRNA_F-serratus_M_contig737.18618.1|organism=Fucus serratus male|type=CDS|length=1356bp|location=Sequence derived from alignment at F-serratus_M_contig737:337852..339826+ (Fucus serratus male)
ATGAATGCTGACGAATACGAGATGAATGCTGACGAATACGAGATCGACGA
TTGGGAGGATCTCTCCGAAAACTCGTTTCCCTCCAAATCATGTGGGGGTA
AAAGCTCGAACGTACTTCCTCCGACTCAAGTCTTGCACCAAAATGTAGAT
ACAAACGAAGCTCCGTCACCCAAGGACTTGGCCCCACTAACGTACCCAGA
AGACCCAACCGGCATTCAAAGCTCTGAGAACGCGCGAACGGCCCAGCGTT
GGGGCTCGAACCGAGCAAGGCATTCTCGACCACTTACAAGACCTCCGTCA
TCGCTGTTTGGCTCAGTCTACTCTGGCCCTTGTTTGAGGGCCAGCGGGGG
GTGTAGGGGTTACGACGCCAGAAGGGCAAGACCGTTTGATCCTCAGATCA
AATGGATGCTGGAGCAAGGTTGGGACGACAGGTTCGCTTCGGGGATACGT
GCAGGATCGACGATTGGGAGGATCTCTCCGAAAACTCGTTTCCCTCCAAA
TCATGTGGGGGTAAAAGCTCGAACGTACTTCCTCCGACTCAAGTCTTGCA
CCAAAATGTAGATACAAACGAAGCTCCGTCACCCAAGGACTTGGCCCCAC
TAACGTACCCAGAAGACCCAACCGGCATTCAAAGCTCTGAGAACGCGCGA
ACGGCCCAGCGTTGGGGCTCGAACCGAGCAAGGCATTCTCGACCACTTAC
AAGACCTCCGTCATCGCTGTTTGGCTCAGTCTACTCTGGCCCTTGTTTGA
GGGCCAGCGGGGGGTGTAGGGGTTACGACGCCAGAAGGGCAAGACCGTTT
GATCCTCAGATCAAATGGATGCTGGAGCAAGGTTGGGACGACAGGTTCGC
TTCGGGGATACGTGCAGGCTTTACTCTGTTCTCAGAGCGGCCCCGTCCAA
GTTTAACGGCTCCTAAAGGATGGGACGATCCTAGAGTAGTACGTTCCATG
TTTAGACCGTCTGCGGGAACGACGACGAACCTAATGGCGTTCCCGTTGAA
GCGGGCCAAATTCCTTGCCGCGGAAAGGGGAGGCGGAACAGCAAAACGAA
CACGATATATGTCCCACATGTTGGGAGGTGACAAGCTTTACTCTGTTCTC
AGAGCGGCCCCGTCCAAGTTTAACGGCTCCTAAAGGATGGGACGATCCTA
GAGTAGTACGTTCCATGTTTAGACCGTCTGCGGGAACGACGACGAACCTA
ATGGCGTTCCCGTTGAAGCGGGCCAAATTCCTTGCCGCGGAAAGGGGAGG
CGGAACAGCAAAACGAACACGATATATGTCCCACATGTTGGGAGGTGACA
AGCAGGTAGAAGATCGTCGAACTCATACACAGGTAGAAGATCGTCGAACT
CATACA
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