prot_F-serratus_M_contig7358.18586.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig7358.18586.1
Unique Name	prot_F-serratus_M_contig7358.18586.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	125

Homology

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BLAST of mRNA_F-serratus_M_contig7358.18586.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 5.030e-69
Identity = 111/124 (89.52%), Postives = 117/124 (94.35%), Query Frame = 0

Query:    1 MTGKGKGGRGDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVASK 124
            M+GKGKGGRG  KK+TTRS+KAGLQFPVGR+GRFLK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRH+QLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK   K
Sbjct:    1 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122

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BLAST of mRNA_F-serratus_M_contig7358.18586.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 1.710e-67
Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 0

Query:    1 MTGKGKGGRGDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            M+GKGKGGRG  KK+TTRS+KAGLQFPVGR+GRFLK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRH+QLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   46 MSGKGKGGRG--KKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 163

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BLAST of mRNA_F-serratus_M_contig7358.18586.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 4.260e-66
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 0

Query:    1 MTGKGKGGRGDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            M+GKGKGGRG  KK+T++SSKAGLQFPV RIGR+LK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRH+QLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118

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BLAST of mRNA_F-serratus_M_contig7358.18586.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 2.180e-65
Identity = 108/120 (90.00%), Postives = 115/120 (95.83%), Query Frame = 0

Query:    1 MTGKGKGGRGDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            M+GKGKGGRG  KK+T++SSKAGLQFPV RIGR+LK GKY+ RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRH+QLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK
Sbjct:   52 MSGKGKGGRG--KKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 169

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BLAST of mRNA_F-serratus_M_contig7358.18586.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 202 bits (515), Expect = 2.880e-65
Identity = 104/124 (83.87%), Postives = 116/124 (93.55%), Query Frame = 0

Query:    1 MTGKGKGGRG-DKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVAS 123
            M GKGKGGRG + KK+T++SSKAGLQFPV R+GRFLK G+Y++RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRH+QLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK AS
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKTAS 124

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BLAST of mRNA_F-serratus_M_contig7358.18586.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 4.200e-65
Identity = 104/120 (86.67%), Postives = 113/120 (94.17%), Query Frame = 0

Query:    1 MTGKGKGGRGDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            M+GKGKGGRG  KK T+RS+KAGLQFPVGRIGRF+K GKYS RVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARI+PRH+QLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRG--KKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118

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BLAST of mRNA_F-serratus_M_contig7358.18586.1 vs. uniprot
Match: B7FZS7_PHATC (Histone H2A n=2 Tax=Naviculales TaxID=38748 RepID=B7FZS7_PHATC)

HSP 1 Score: 199 bits (505), Expect = 1.290e-63
Identity = 99/118 (83.90%), Postives = 112/118 (94.92%), Query Frame = 0

Query:    3 GKGKGGRGDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 120
            GKGKGGRGDKK+TT+ SSKAGLQFPVGRIGR+L+ GKY+ R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRH+ LAV+NDEELNKLLG VTIA+GGVLPNIHA+LLPKK
Sbjct:   10 GKGKGGRGDKKQTTSSSSKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGNVTIAAGGVLPNIHAILLPKK 127

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BLAST of mRNA_F-serratus_M_contig7358.18586.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.950e-63
Identity = 101/122 (82.79%), Postives = 115/122 (94.26%), Query Frame = 0

Query:    3 GKGKGGRGDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVASK 124
            GKGKGGRGDKK   ++S+KAGLQFPVGR+GRFLK G+Y++RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RIIPRH+QLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKK  SK
Sbjct:    5 GKGKGGRGDKK-AVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSK 125

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BLAST of mRNA_F-serratus_M_contig7358.18586.1 vs. uniprot
Match: A0A835ZBB6_9STRA (Histone H2A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBB6_9STRA)

HSP 1 Score: 197 bits (500), Expect = 6.130e-63
Identity = 101/125 (80.80%), Postives = 115/125 (92.00%), Query Frame = 0

Query:    1 MTGKGKGGRG-DKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVASK 124
            M GKGKGGRG + KK T++S+KAGLQFPV R+GR+LK G+Y+ RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RI+PRH+QLAVRNDEELN+LLG VTIASGGVLPNIHAVLLPKK A+K
Sbjct:    1 MAGKGKGGRGAEGKKITSQSAKAGLQFPVARMGRYLKQGRYADRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNRLLGNVTIASGGVLPNIHAVLLPKKTAAK 125

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BLAST of mRNA_F-serratus_M_contig7358.18586.1 vs. uniprot
Match: A0A6G0X3A7_9STRA (Histone H2A n=29 Tax=Saprolegniaceae TaxID=4764 RepID=A0A6G0X3A7_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.240e-62
Identity = 102/125 (81.60%), Postives = 114/125 (91.20%), Query Frame = 0

Query:    1 MTGKGK--GGRGDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKVAS 123
            M+GKGK  GGRG K KT++RS+KAGLQFPVGR+ RFLK G+Y+QR+G GAPVYLAAVLEYL AE+LELAGNAARDNKK+RIIPRH+QLAVRNDEELNKLLG VTIASGGVLPNIH VLLPKK +S
Sbjct:    1 MSGKGKATGGRGKKGKTSSRSAKAGLQFPVGRVARFLKKGRYAQRIGGGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHNVLLPKKSSS 125

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig7358.18586.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig7358.18586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI9_ECTSI	5.030e-69	89.52	Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
D7G193_ECTSI	1.710e-67	91.67	Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
A0A6H5KG79_9PHAE	4.260e-66	90.00	Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D7FVQ5_ECTSI	2.180e-65	90.00	Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
A0A836CG77_9STRA	2.880e-65	83.87	Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
D8LLP0_ECTSI	4.200e-65	86.67	Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8...	[more]
B7FZS7_PHATC	1.290e-63	83.90	Histone H2A n=2 Tax=Naviculales TaxID=38748 RepID=...	[more]
A0A835ZLE9_9STRA	1.950e-63	82.79	Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
A0A835ZBB6_9STRA	6.130e-63	80.80	Histone H2A n=1 Tax=Tribonema minus TaxID=303371 R...	[more]
A0A6G0X3A7_9STRA	1.240e-62	81.60	Histone H2A n=29 Tax=Saprolegniaceae TaxID=4764 Re...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 58..71 score: 90.54 coord: 43..58 score: 90.36 coord: 14..36 score: 68.78 coord: 100..118 score: 76.04 coord: 72..86 score: 76.51
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 3..123 e-value: 7.6E-80 score: 281.2
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 92..123 e-value: 8.6E-19 score: 67.0
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 2..124 e-value: 5.8E-62 score: 209.2
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 4..122
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 11..89 e-value: 4.7E-15 score: 56.1
None	No IPR available	PANTHER	PTHR23430:SF233	HISTONE H2A.6-RELATED	coord: 1..122
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 1..122
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 22..28

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig7358	contig	F-serratus_M_contig7358:9533..9907 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig7358.18586.1	mRNA_F-serratus_M_contig7358.18586.1	Fucus serratus male	mRNA	F-serratus_M_contig7358 9533..9907 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig7358.18586.1 ID=prot_F-serratus_M_contig7358.18586.1|Name=mRNA_F-serratus_M_contig7358.18586.1|organism=Fucus serratus male|type=polypeptide|length=125bp
MTGKGKGGRGDKKKTTTRSSKAGLQFPVGRIGRFLKAGKYSQRVGAGAPV
YLAAVLEYLTAEVLELAGNAARDNKKARIIPRHVQLAVRNDEELNKLLGE
VTIASGGVLPNIHAVLLPKKVASK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002119	Histone_H2A
IPR032454	Histone_H2A_C
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3
IPR032458	Histone_H2A_CS