prot_F-serratus_M_contig7358.18584.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig7358.18584.1
Unique Name	prot_F-serratus_M_contig7358.18584.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	113

Homology

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BLAST of mRNA_F-serratus_M_contig7358.18584.1 vs. uniprot
Match: A0A7I8J9K8_SPIIN (Histone H4 n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8J9K8_SPIIN)

HSP 1 Score: 179 bits (454), Expect = 3.190e-56
Identity = 91/104 (87.50%), Postives = 98/104 (94.23%), Query Frame = 0

Query:    9 KHVRTRKGREGSGQGWCKAPPKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 112
            ++VR+ KGREG+G+G  K   KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   23 RNVRSGKGREGAGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 126

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BLAST of mRNA_F-serratus_M_contig7358.18584.1 vs. uniprot
Match: A0A2J6LKC2_LACSA (Histone H4 n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LKC2_LACSA)

HSP 1 Score: 177 bits (448), Expect = 1.990e-54
Identity = 91/102 (89.22%), Postives = 95/102 (93.14%), Query Frame = 0

Query:   11 VRTRKGREGSGQGWCKAPPKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 112
            VRT KGR+G G+G  K   KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   89 VRTWKGRKGFGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 190

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BLAST of mRNA_F-serratus_M_contig7358.18584.1 vs. uniprot
Match: UPI001BE4C7AC (histone H4-like n=1 Tax=Anopheles merus TaxID=30066 RepID=UPI001BE4C7AC)

HSP 1 Score: 174 bits (441), Expect = 5.580e-54
Identity = 90/103 (87.38%), Postives = 94/103 (91.26%), Query Frame = 0

Query:   10 HVRTRKGREGSGQGWCKAPPKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 112
            H   RKGR+G G+G  K   KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   43 HDWKRKGRKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 145

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BLAST of mRNA_F-serratus_M_contig7358.18584.1 vs. uniprot
Match: A0A671WNM0_SPAAU (Histone H4 n=2 Tax=Sparus aurata TaxID=8175 RepID=A0A671WNM0_SPAAU)

HSP 1 Score: 172 bits (436), Expect = 8.530e-54
Identity = 89/101 (88.12%), Postives = 93/101 (92.08%), Query Frame = 0

Query:   12 RTRKGREGSGQGWCKAPPKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 112
            R RKG +G G+G  K   KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    3 RQRKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_F-serratus_M_contig7358.18584.1 vs. uniprot
Match: A0A024G0M5_9STRA (Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepID=A0A024G0M5_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.210e-53
Identity = 89/98 (90.82%), Postives = 91/98 (92.86%), Query Frame = 0

Query:   15 KGREGSGQGWCKAPPKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 112
            KG +G G+G  K   KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    6 KGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_F-serratus_M_contig7358.18584.1 vs. uniprot
Match: F0W2L9_9STRA (Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID=F0W2L9_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.210e-53
Identity = 89/98 (90.82%), Postives = 91/98 (92.86%), Query Frame = 0

Query:   15 KGREGSGQGWCKAPPKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 112
            KG +G G+G  K   KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    6 KGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_F-serratus_M_contig7358.18584.1 vs. uniprot
Match: H4_SOLLC (Histone H4 n=13 Tax=cellular organisms TaxID=131567 RepID=H4_SOLLC)

HSP 1 Score: 171 bits (434), Expect = 1.720e-53
Identity = 88/98 (89.80%), Postives = 91/98 (92.86%), Query Frame = 0

Query:   15 KGREGSGQGWCKAPPKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 112
            KG +G G+G  K   KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    6 KGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103

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BLAST of mRNA_F-serratus_M_contig7358.18584.1 vs. uniprot
Match: A0A3P9M5H4_ORYLA (Histone H4 n=2 Tax=Bilateria TaxID=33213 RepID=A0A3P9M5H4_ORYLA)

HSP 1 Score: 171 bits (434), Expect = 1.890e-53
Identity = 89/104 (85.58%), Postives = 94/104 (90.38%), Query Frame = 0

Query:    9 KHVRTRKGREGSGQGWCKAPPKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 112
            K +R  KG +G G+G  K   KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    3 KSLRRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 106

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BLAST of mRNA_F-serratus_M_contig7358.18584.1 vs. uniprot
Match: A0A1I8PLR9_STOCA (Histone H4 n=6 Tax=Bilateria TaxID=33213 RepID=A0A1I8PLR9_STOCA)

HSP 1 Score: 171 bits (434), Expect = 1.890e-53
Identity = 90/106 (84.91%), Postives = 95/106 (89.62%), Query Frame = 0

Query:    7 SFKHVRTRKGREGSGQGWCKAPPKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 112
            SF   +T KG+ G G+G  K   KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    2 SFSRPKTHKGK-GLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 106

[Close]

BLAST of mRNA_F-serratus_M_contig7358.18584.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.420e-53
Identity = 89/98 (90.82%), Postives = 91/98 (92.86%), Query Frame = 0

Query:   15 KGREGSGQGWCKAPPKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 112
            KG +G G+G  K   KVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   28 KGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig7358.18584.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig7358.18584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7I8J9K8_SPIIN	3.190e-56	87.50	Histone H4 n=1 Tax=Spirodela intermedia TaxID=5160...	[more]
A0A2J6LKC2_LACSA	1.990e-54	89.22	Histone H4 n=1 Tax=Lactuca sativa TaxID=4236 RepID...	[more]
UPI001BE4C7AC	5.580e-54	87.38	histone H4-like n=1 Tax=Anopheles merus TaxID=3006...	[more]
A0A671WNM0_SPAAU	8.530e-54	88.12	Histone H4 n=2 Tax=Sparus aurata TaxID=8175 RepID=...	[more]
A0A024G0M5_9STRA	1.210e-53	90.82	Histone H4 n=40 Tax=Stramenopiles TaxID=33634 RepI...	[more]
F0W2L9_9STRA	1.210e-53	90.82	Histone H4 n=3 Tax=Stramenopiles TaxID=33634 RepID...	[more]
H4_SOLLC	1.720e-53	89.80	Histone H4 n=13 Tax=cellular organisms TaxID=13156...	[more]
A0A3P9M5H4_ORYLA	1.890e-53	85.58	Histone H4 n=2 Tax=Bilateria TaxID=33213 RepID=A0A...	[more]
A0A1I8PLR9_STOCA	1.890e-53	84.91	Histone H4 n=6 Tax=Bilateria TaxID=33213 RepID=A0A...	[more]
A0A3L6V663_9STRA	2.420e-53	90.82	Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001951	Histone H4	PRINTS	PR00623	HISTONEH4	coord: 71..85 score: 91.96 coord: 49..69 score: 93.56 coord: 86..98 score: 90.05 coord: 14..25 score: 40.2 coord: 29..48 score: 88.97 coord: 98..109 score: 97.79
IPR001951	Histone H4	SMART	SM00417	h44	coord: 25..99 e-value: 1.2E-27 score: 107.8
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 12..112 e-value: 6.5E-52 score: 175.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 14..111
IPR035425	CENP-T/Histone H4, histone fold	PFAM	PF15511	CENP-T_C	coord: 46..105 e-value: 2.9E-8 score: 33.8
None	No IPR available	PANTHER	PTHR10484	HISTONE H4	coord: 15..112
None	No IPR available	PANTHER	PTHR10484:SF171		coord: 15..112

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig7358	contig	F-serratus_M_contig7358:4623..4961 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig7358.18584.1	mRNA_F-serratus_M_contig7358.18584.1	Fucus serratus male	mRNA	F-serratus_M_contig7358 4623..4961 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig7358.18584.1 ID=prot_F-serratus_M_contig7358.18584.1|Name=mRNA_F-serratus_M_contig7358.18584.1|organism=Fucus serratus male|type=polypeptide|length=113bp
TRQHPASFKHVRTRKGREGSGQGWCKAPPKVLRDNIQGITKPAIRRLARR
GGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYAL
KRQGRTLYGFGG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001951	Histone_H4
IPR009072	Histone-fold
IPR035425	CENP-T/H4_C