prot_F-serratus_M_contig735.18583.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig735.18583.1
Unique Nameprot_F-serratus_M_contig735.18583.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length605
Homology
BLAST of mRNA_F-serratus_M_contig735.18583.1 vs. uniprot
Match: A0A6H5KRX1_9PHAE (Homeobox domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRX1_9PHAE)

HSP 1 Score: 241 bits (616), Expect = 7.350e-68
Identity = 190/532 (35.71%), Postives = 254/532 (47.74%), Query Frame = 0
Query:   81 QGLSDSTCSSSFVAHA----PLHSQTSIVNFDQAAVPDSVDPLSYFLMSWRKDHDPFDLGIGSVADGTFAGRQPTCEQLLLFRSHRLMQAEAVSIAMNKTYSSSASE----KERLGLIGKTVARKAWEKLLEKTVSTMKRIRALRRDGIFHTGKQQEVIDEERKICNRMIAAVFDKATCILKEISDSDRIVSSGSGCSRGSDYGSTSSGFGNISGNNNYYSIAAMEPGSGSESGNRLAFSPPTLESSSPFEYHQLGTNPACWEGEANTSCVTMAPLPPTAPPITMPEPPQRQSVTRQHHLITPQQLPIMHSPGGIVGSSNVFALTKMGDRLYHH-----------------------------------APLGGSHGGLSNPMS-HSVDESQLAARTSRLTGPFQGKQTNKKSPMVTKMSAM---TPVG------LRSAHSNRKGSRHRLTPQAKDILEGWLAKHWLNPYPTEEEKFCLAQACKITVPQVNNWMMNVRVRRCRTKKIGVATGPAQITFANVPKSIMPQGMVA 559
            QGL   +    F+ H     P      +++F      D  DPLS+FL S R        G+GSVADGTF GR+ T E+L+LFRSHRL+QAEAV +A+   +SS  ++    ++RL L+   V R+   K+LE+T + ++ +RAL         +QQ VI+ ER+ C+R+++ V D+ T  LKE+S      ++G G            G G++S                 + G  +A  PP+   S   E  QL +    WE  A +S                                      I+H      G S+VFALT+M DR  HH                                   AP G  HGGLS+P +    D        + + G  +GK+           S +   TP         RS ++NRKGSRHRLTPQAK+ILEGWLAKHWLNPYPTEE+K  LAQ C ITV QVNNWMMNVRVRRCRTKKIG+ATGP +IT+    K+  P+ + A
Sbjct:   68 QGLGRVSSPILFMGHQQQPLPYPPDAQVISFTDPYPHDDSDPLSFFLSSGRGXXXXXXXGLGSVADGTFGGRKATPEELMLFRSHRLLQAEAVGVAIGPLHSSGGADAAYVRKRLRLVSTAVERQLRLKVLEQTNAAVEGVRALGEGA--PPAQQQSVINAERRNCHRVLSGVLDEGTATLKELS------TTGGG------------GQGDVS----------------VDMGMDMAL-PPSALGSPATESQQLAST---WEDAATSSSXXXXXXXXXXXXXXX----XXXXXXXXXXXXXXXXXSILHHMPPGTGRSSVFALTQMRDRPQHHHSQLGMALGSTRMEGADGMKQQGMGASFGSGGGAAAPPGHDHGGLSDPSAGFDGDLWGATGGGASVGGGGRGKRATSNVGKAKNRSGLLKKTPPSDAVTDPRRSVYNNRKGSRHRLTPQAKEILEGWLAKHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYTAAGKAT-PKALAA 554          
BLAST of mRNA_F-serratus_M_contig735.18583.1 vs. uniprot
Match: D7FSL4_ECTSI (Transcription factor protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSL4_ECTSI)

HSP 1 Score: 226 bits (575), Expect = 1.210e-63
Identity = 172/478 (35.98%), Postives = 234/478 (48.95%), Query Frame = 0
Query:   97 PLHSQTSIVNFDQAAVPDSVDPLSYFLMSWRKDHDPFDLGIGSVADGTFAGRQPTCEQLLLFRSHRLMQAEAVSIAMNKTYSSSASE----KERLGLIGKTVARKAWEKLLEKTVSTMKRIRALRRDGIFHTGKQQEVIDEERKICNRMIAAVFDKATCILKEISDSDRIVSSGSGCSRGSDYGSTSSGFGNISGNNNYYSIAAMEPGSGSESGNRLAFSPPTLESSSPFEYHQLGTNPACWEGEANTSCVTMAPLPPTAPPITMPEPPQRQSVTRQHHLITPQQLPIMHSPGGIVGSSNVFALTKMGDRLYHHAPLGGSHGGLSNPMSHSVDESQLAARTSRLTGPFQGK--------QTNKKSPMVTKM---SAMTPVGLRSAHSNRKGSRHRLTPQAKDILEGWLAKHWLNPYPTEEEKFCLAQACKITVPQVNNWMMNVRVRRCRTKKIGVATGPAQITFANVPKSIMPQGMVA 559
            P      +++F +    D  DPLS+FL S R        G+GSVADGTF GR+ T E+L+LFRSHRL+QAEAV +A+   + S  +     ++RLGL+   V R+   K+LE+T + ++ +RAL         +QQ VI+ ER+ C+R+++ V D+ T  L+E+S      ++G G            G G +S          ++ G G      +AF PP+   S   E  QLG                                      TR            M   GG+       +    G  +   AP G +HGGLS+P +                              +  K+S ++ K     A+T    R  ++NRKGSRHRLTPQAK+ILEGWLA HWLNPYPTEE+K  LAQ C ITV QVNNWMMNVRVRRCRTKKIG+ATGP +IT+A   K+  P+ + A
Sbjct:    9 PYPPDAQVLSFPEPYPHDDSDPLSFFLSSGRGXXXXXXXGLGSVADGTFGGRKATPEELMLFRSHRLLQAEAVGVAIGPLHPSGGANAAYVRKRLGLVSTAVERQLRLKVLEQTNTAVEGVRALGEGA--PPAQQQSVINAERRNCHRVLSGVLDEGTATLRELS------TTGGG------------GLGGVS----------VDMGMG------MAF-PPSALGSPATESQQLG---------------------------------MALGSTR------------MEGAGGMKQQGMGASFGSGGGAV---APPGHNHGGLSDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXNVGKAKKRSGLLKKTPPSDALTD-SRRPVYNNRKGSRHRLTPQAKEILEGWLANHWLNPYPTEEQKLYLAQNCHITVTQVNNWMMNVRVRRCRTKKIGLATGPEEITYAAAGKAT-PKALAA 399          
BLAST of mRNA_F-serratus_M_contig735.18583.1 vs. uniprot
Match: UPI001B862EBA (homeobox KN domain-containing protein n=1 Tax=Suillus clintonianus TaxID=1904413 RepID=UPI001B862EBA)

HSP 1 Score: 54.3 bits (129), Expect = 6.720e-6
Identity = 23/57 (40.35%), Postives = 38/57 (66.67%), Query Frame = 0
Query:  470 RKGSRHRLTPQAKDILEGWLAKHWLNPYPTEEEKFCLAQACKITVPQVNNWMMNVRV 526
            +K  R +L  +  D L+ WL +H  +PYP+EEEK  +  A  +++ Q++NWM+NVR+
Sbjct:    2 QKRLRGKLPEEVTDYLKTWLHRHSDHPYPSEEEKKHICHATGLSMTQISNWMINVRI 58          
BLAST of mRNA_F-serratus_M_contig735.18583.1 vs. uniprot
Match: A0A7J7IPC1_9RHOD (Homeobox domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IPC1_9RHOD)

HSP 1 Score: 56.6 bits (135), Expect = 6.990e-5
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0
Query:  480 QAKDILEGWLAKHWLNPYPTEEEKFCLAQACKITVPQVNNWMMNVRVR 527
            Q   +L+ WL  H+LNPYPT+EEK  L +   +T  Q+NNW +N RVR
Sbjct:  294 QVSRVLKKWLFDHFLNPYPTDEEKHELMRQTGLTFNQLNNWFINARVR 341          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig735.18583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KRX1_9PHAE7.350e-6835.71Homeobox domain-containing protein n=1 Tax=Ectocar... [more]
D7FSL4_ECTSI1.210e-6335.98Transcription factor protein n=1 Tax=Ectocarpus si... [more]
UPI001B862EBA6.720e-640.35homeobox KN domain-containing protein n=1 Tax=Suil... [more]
A0A7J7IPC1_9RHOD6.990e-550.00Homeobox domain-containing protein n=1 Tax=Cyanidi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 470..535
e-value: 2.5E-5
score: 33.7
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 468..531
score: 11.548
NoneNo IPR availableGENE3D1.10.10.60coord: 443..529
e-value: 6.9E-18
score: 66.3
NoneNo IPR availablePANTHERPTHR11850:SF211HOMEOBOX PROTEIN CEH-20-RELATEDcoord: 357..528
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 357..528
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 488..527
e-value: 5.5E-12
score: 45.4
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 470..534

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig735contigF-serratus_M_contig735:384153..397084 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig735.18583.1mRNA_F-serratus_M_contig735.18583.1Fucus serratus malemRNAF-serratus_M_contig735 384035..397279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig735.18583.1 ID=prot_F-serratus_M_contig735.18583.1|Name=mRNA_F-serratus_M_contig735.18583.1|organism=Fucus serratus male|type=polypeptide|length=605bp
MPLGYSMMASCEPAMMGSSSATLMSPNESAQNIEEAGVEASRGGASRRNF
GSGGDGGSGCAEHESVSCMLRRNHGMTGIIQGLSDSTCSSSFVAHAPLHS
QTSIVNFDQAAVPDSVDPLSYFLMSWRKDHDPFDLGIGSVADGTFAGRQP
TCEQLLLFRSHRLMQAEAVSIAMNKTYSSSASEKERLGLIGKTVARKAWE
KLLEKTVSTMKRIRALRRDGIFHTGKQQEVIDEERKICNRMIAAVFDKAT
CILKEISDSDRIVSSGSGCSRGSDYGSTSSGFGNISGNNNYYSIAAMEPG
SGSESGNRLAFSPPTLESSSPFEYHQLGTNPACWEGEANTSCVTMAPLPP
TAPPITMPEPPQRQSVTRQHHLITPQQLPIMHSPGGIVGSSNVFALTKMG
DRLYHHAPLGGSHGGLSNPMSHSVDESQLAARTSRLTGPFQGKQTNKKSP
MVTKMSAMTPVGLRSAHSNRKGSRHRLTPQAKDILEGWLAKHWLNPYPTE
EEKFCLAQACKITVPQVNNWMMNVRVRRCRTKKIGVATGPAQITFANVPK
SIMPQGMVAAEAEHLLADRTTFMGTKGVTSTAIVGGSKGSPPEKMSWASP
RGGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR008422Homeobox_KN_domain
IPR009057Homeobox-like_sf