mRNA_F-serratus_M_contig7337.18559.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7337.18559.1 vs. uniprot
Match: A0A2P4XSG7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG7_9STRA) HSP 1 Score: 111 bits (277), Expect = 1.670e-24 Identity = 77/268 (28.73%), Postives = 129/268 (48.13%), Query Frame = 1
Query: 1 WRASFGVPKAFTSDGGTHFIRQVMHMVSSRLGVVHHFGVANVWWSHGTLERMNREVVKTSKGVGPRTIDRWR-----WGLCCELSCM--GTTPFQMMMGRPPATVMSMLDVVKRVRE-------QHERVGELSARGH--------LAVFEVGDYVLVARVRKQVCVPRLVQTWIGPRRVVPGGTEYARVVKDIVTGEMKEVQVVQMRLYADSSLVVGAEVREMFEMTKHQGEFDIADTISDGKDPARVGEYWVQIVWAGLEDEERTWE 738
W ASFGV + + SD GTHF +V+ + LG HHF A W++GT+E +NREV++ + + + WR W ++ M +P + G P T M+ L + Q + E+ R H +A F+VGD+VL A V + V+ W GP +V + + +++++TGE +EV +++ YADSSL V ++ H E + D++ + A+ + +++ W GL + E +WE
Sbjct: 179 WFASFGVVRWWVSDQGTHFKNKVIEGLQHALGAHHHFTTARCPWANGTVEVVNREVLRCCRAL----LSEWRLQSGEWPRVIKIVQMVLNHSPCSAIDGVAPVTAMTGLKAMNPTDPLAVPDPIQVATLDEIQRRKHHNGKKGTTMAQFDVGDFVLYADVWQHARAKLRVK-WCGPAQVTAATSNWIFEIENLITGERREVHASRLKFYADSSLEV---TEDLLRHVAHNSEGHVVDSLLAARYNAQEKRHELKVHWRGLAEAEDSWE 438
BLAST of mRNA_F-serratus_M_contig7337.18559.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE) HSP 1 Score: 104 bits (260), Expect = 2.500e-24 Identity = 53/129 (41.09%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 355 SARGHLAVFEVGDYVLVARVRKQVCVPRLVQTWIGPRRVVPGGTEYARVVKDIVTGEMKEVQVVQMRLYADSSLVVGAEVREMFEMTKHQGEFDIADTISDGKDPARVGE-YWVQIVWAGLEDEERTWE 738
++RG L F VGDYV+VARVR+ P+L TW GP RVV ++ V++IV G++++V V ++R YADS L V ++++++F+ + QGE ++ ++ G PA G Y V++ WAG E++E TW+
Sbjct: 7 ASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQ 133
BLAST of mRNA_F-serratus_M_contig7337.18559.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE) HSP 1 Score: 106 bits (264), Expect = 6.450e-23 Identity = 55/144 (38.19%), Postives = 90/144 (62.50%), Query Frame = 1
Query: 310 VVKRVREQHERVGELSARGHLAVFEVGDYVLVARVRKQVCVPRLVQTWIGPRRVVPGGTEYARVVKDIVTGEMKEVQVVQMRLYADSSLVVGAEVREMFEMTKHQGEFDIADTISDGKDPARVGE-YWVQIVWAGLEDEERTWE 738
+ ++V R ++RG L F VGDYV+VARVR+ P+L TW GP RVV ++ V++IV G++++V V ++R YADS L V ++++++F+ + QGE ++ ++ G PA G Y V++ WAG E++E TW+
Sbjct: 247 IQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQ 388
BLAST of mRNA_F-serratus_M_contig7337.18559.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 106 bits (265), Expect = 1.580e-22 Identity = 56/144 (38.89%), Postives = 90/144 (62.50%), Query Frame = 1
Query: 310 VVKRVREQHERVGELSARGHLAVFEVGDYVLVARVRKQVCVPRLVQTWIGPRRVVPGGTEYARVVKDIVTGEMKEVQVVQMRLYADSSLVVGAEVREMFEMTKHQGEFDIADTISDGKDPARVGE-YWVQIVWAGLEDEERTWE 738
V ++V R ++RG L F VGDYV+VARVR+ P+L TW GP RVV ++ V++IV G++++V V ++R YADS L V ++++++F+ + QGE ++ ++ G PA G Y V++ WAG E++E TW+
Sbjct: 1470 VQQKVDHNRARQRAAASRGDLPAFTVGDYVMVARVRRSGITPKLSSTWTGPWRVVSAAKKHVYGVQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIG--PAHDGSGYLVRVRWAGFEEDEDTWQ 1611
BLAST of mRNA_F-serratus_M_contig7337.18559.1 vs. uniprot
Match: A0A225VHA2_9STRA (Chromodomain protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VHA2_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.810e-21 Identity = 66/246 (26.83%), Postives = 110/246 (44.72%), Query Frame = 1
Query: 1 WRASFGVPKAFTSDGGTHFIRQVMHMVSSRLGVVHHFGVANVWWSHGTLERMNREVVKTSKGVGPRTIDRWRWGLCCELSCMGTTPFQMMMGRPPATVMSMLDVVKRVREQHERVGELSARGHLAVFEVGDYVLVARVRKQVCVPRLVQTWIGPRRVVPGGTEYARVVKDIVTGEMKEVQVVQMRLYADSSLVVGAEVREMFEMTKHQGEFDIADTISDGKDPARVGEYWVQIVWAGLEDEERTWE 738
W A+FGV A+ SD GTHF +V+ + LG HHF A W++GT+E + RE ++ + G P +M G P + + + + R A +A ++VGDYVL A V +L W GP +V + + +VK+++TG+ +EV +++ Y+D +L V E+ H E + + D + ++ + + W GL E +WE
Sbjct: 3 WFATFGVCLAWVSDQGTHFKNEVIKALQHALGAHHHFTTARCPWANGTVEVVMREALRCFLQIALNNTPAKSLG--------DHAPITVMTGLPAMSPLDAITLPAPAARAKGRKNSRKASAIMAQYDVGDYVLYADVWAHTRA-KLSVKWCGPAQVTSAVSAWIFIVKNLITGDEREVHASRLKFYSDQTLDV---TEELLAHIAHNSEGHVVARLLDSRYNEAEKQFELLVNWRGLSSIENSWE 236
BLAST of mRNA_F-serratus_M_contig7337.18559.1 vs. uniprot
Match: A0A080ZI93_PHYPR (Uncharacterized protein n=2 Tax=Phytophthora parasitica TaxID=4792 RepID=A0A080ZI93_PHYPR) HSP 1 Score: 93.2 bits (230), Expect = 6.690e-18 Identity = 69/270 (25.56%), Postives = 119/270 (44.07%), Query Frame = 1
Query: 1 WRASFGVPKAFTSDGGTHFIRQVMHMVSSRLGVVHHFGVANVWWSHGTLERMNREVVKTSKGVGPRTIDRWR-----WGLCCELSCM--GTTPFQMMMGRPPATVMSMLDV--------------VKRVREQHERVGELSARGHLAVFEVGDYVLVARVRKQVCV---PRLVQTWIGPRRVVPGGTEYARVVKDIVTGEMKEVQVVQMRLYADSSLVVGAEVREMFEMTKHQGEFDIADTISDGKDPARVGEYWVQIVWAGLEDEERTWE 738
W A FGV + + SD GTHF +V+ + +G HHF A W++GT+E +NRE+++ + + + WR W ++ M +P + G P T M+ L V + E E AR A+ ++ + A +K+ P+L W GP +V + + ++++VTGE +E +++ YAD+SL V ++ H E + DT + + + + W GL+ E +WE
Sbjct: 1228 WFACFGVCRFWVSDQGTHFKNKVIEDMQHAMGSHHHFTTARCPWANGTVEVVNREILRCCRAL----LFEWRLQPTDWPRVIKIVQMVLNHSPCSAIDGVAPVTAMTGLRAMNPTDPIAVPEPIQVATLNEIKRSRSENIARLQAALADMHKHTAKANKKKRAASKKHPKLRVKWCGPAQVTAATSNWIFEIENLVTGERREAHASRLKFYADNSLAV---TEDLHRHVAHNSEGHVVDTFLSTRYNTNEKRHELLVHWRGLDTVEDSWE 1490
BLAST of mRNA_F-serratus_M_contig7337.18559.1 vs. uniprot
Match: A0A2P4XGX1_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XGX1_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.500e-15 Identity = 65/219 (29.68%), Postives = 103/219 (47.03%), Query Frame = 1
Query: 1 WRASFGVPKAFTSDGGTHFIRQVMHMVSSRLGVVHHFGVANVWWSHGTLERMNREVVKTSK----------GVGPRTIDRWRWGL----CCELSCMGTTPFQMMMGR-----------PPATVMSMLDVVKRVREQHERVGELSARGHLAVFEVGDYVLVARVRKQVCVPRLVQTWIGPRRVVPGGTEYARVVKDIVTGEMKEVQVVQMRLYADSSLVV 582
W A FGV + + SD GTHF +V+ + LG HF A W++GT+E +NREV++ + G PR I ++ L C + G P M G P ++ LD +R R+ H + + +A F++GD+VL A V Q +L W GP +V + ++++++GE +EV +++ Y DSSL V
Sbjct: 87 WFAMFGVVRWWVSDQGTHFKNKVLEGLQHALGAHRHFTTARCTWTNGTVEVVNREVLRCCRALLSEWRLQSGEWPRVIKNFQMVLNHSPCSAID--GVAPVTAMTGLKVMDPTDPLAVPDPIQVATLDDFQR-RKHHNGIKGTT----MAQFDMGDFVLYADVW-QYARAKLRVKWCGPAQVTAAASNGIFEIENLISGERREVHAGRLKFYTDSSLEV 297
BLAST of mRNA_F-serratus_M_contig7337.18559.1 vs. uniprot
Match: A0A6G0X6F5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X6F5_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 7.910e-11 Identity = 70/261 (26.82%), Postives = 115/261 (44.06%), Query Frame = 1
Query: 1 WRASFGVPKAFTSDGGTHFIRQVMHMVSSRLGVVHHFGVANVWWSHGTLERMNREVVKTSKGV------------GPRTIDRWRWGLCCELSCMGTTPFQMMMGRPPATVMSMLDVVKRVREQHERVGELSARGHLAVFEVGDYVLVARVRKQVCVPRLVQTWIGPRRVVPGGTEYARVVKDIVTGEMKEVQ-VVQMRLYADSSLVVGAEVREMFEMTKHQGEFDIADTISDGKDPARV--GEYWVQIVWAGLEDEERTWE 738
W + FGV K + SD G+HF +V+ + G HHF + W++GT+E +NR +V+T K + P+TID + + ++ + +M V + D KR R + R + + L F + D+VLVAR K +L W GP RVV +++ V+ +V + ++RLY + ++ E Q F +G + R+ GE+ ++I W L D E WE
Sbjct: 183 WFSLFGVVKTWVSDCGSHFKNEVIDAMRRMFGAHHHFVTPHCPWANGTVEVVNRLIVRTLKVLCSEMRIVRTDEPDPKTIDWVKSEMAKHMADLAIALEEM-----HKEVKATADR-KRARARASRTKQRGVK--LTKFALSDFVLVARALKHP--GKLTLRWKGPCRVVRVLSDHLMEVEQLVPPRETTLHHACRLRLYHEGG-------HDVDEDLVAQIAFGDEGFYVEGIEDLRMHDGEWQLKIKWMDLVDAESLWE 426
BLAST of mRNA_F-serratus_M_contig7337.18559.1 vs. uniprot
Match: A0A225WPR2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPR2_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.500e-10 Identity = 67/256 (26.17%), Postives = 112/256 (43.75%), Query Frame = 1
Query: 13 FGVPKAFTSDGGTHFIRQVMHMVSSRLGVVHHFGVANVWWSHGTLERMNREVVKTSKGV----------GPRTIDRWRWGL---CCELSCMGTTPFQMMMGRPPATVMSMLDVVKRVREQHERVGELSARGHLAV-FEVGDYVLVARVRKQVCVPRLVQTWIGPRRVVPGGTEYARVVKDIVTGEMKEVQVVQMRLYADSSLVVGAEVREMFEMTKHQGEFDIADTISDGKDPARVGEYWVQIVWAGLEDEERTWE 738
FG+P+ + SD G+HF ++V++ + +RL F W +G++ER+N ++++ + + PR I + L L TT R V +M V R + + + RG V F VGDYVL +RV ++ LV TW+GP V +VK ++TG +V +++ +A+ L V E+ + QG + + Y + + W GLE E +WE
Sbjct: 7 FGIPRDWISDQGSHFKKEVINELCTRLKCQQIFSPTYSPWINGSVERVNGDILQVLRVLILDYKINYRDWPRLIPIVQASLNHTAVPLLADMTTGELFTPLRHCRLVQAMHKAVTDARLKQTLLNKKRERGDSMVNFNVGDYVLRSRVDEKRQTKLLV-TWVGPYAVTAAHAHNVFMVKQLLTGGELDVHTSRLKFFANKDLKV---TEELLDHVAAQGIVLRVRELVQYRWNDESRSYEILVGWHGLEAIEDSWE 258
BLAST of mRNA_F-serratus_M_contig7337.18559.1 vs. uniprot
Match: A0A484EAG7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAG7_BRELC) HSP 1 Score: 61.6 bits (148), Expect = 5.070e-8 Identity = 40/133 (30.08%), Postives = 74/133 (55.64%), Query Frame = 1
Query: 340 RVGELSARGHLAVFEVGDYVLVARVRKQVCVPRLVQTWIGPRRVVPGGTEYARVVKDIVTGEMKEVQVVQMRLYADSSLVVGAEVREMFEMTKHQGEFDIADTISDGKDPARVGEYWVQIVWAGLEDEERTWE 738
R ++++ A FEV ++VL +R+ ++ +L W+GP V E++ ++K+I+TG + +V QM+ ++++ L V E+RE +QG +I D R + +++ WAGLE+EE +WE
Sbjct: 31 REQQVASNHRPANFEVREFVLWSRIDPRLTASKLTVRWVGPF-AVEEVKEHSFLIKNILTGSLHDVHGSQMKRFSENHLSVTDELREH---VANQGLVLGVSSIDD----LRYNKQQLKVSWAGLEEEESSWE 155 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7337.18559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7337.18559.1 >prot_F-serratus_M_contig7337.18559.1 ID=prot_F-serratus_M_contig7337.18559.1|Name=mRNA_F-serratus_M_contig7337.18559.1|organism=Fucus serratus male|type=polypeptide|length=249bp WRASFGVPKAFTSDGGTHFIRQVMHMVSSRLGVVHHFGVANVWWSHGTLEback to top mRNA from alignment at F-serratus_M_contig7337:13755..14534- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7337.18559.1 ID=mRNA_F-serratus_M_contig7337.18559.1|Name=mRNA_F-serratus_M_contig7337.18559.1|organism=Fucus serratus male|type=mRNA|length=780bp|location=Sequence derived from alignment at F-serratus_M_contig7337:13755..14534- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7337:13755..14534- >mRNA_F-serratus_M_contig7337.18559.1 ID=mRNA_F-serratus_M_contig7337.18559.1|Name=mRNA_F-serratus_M_contig7337.18559.1|organism=Fucus serratus male|type=CDS|length=1494bp|location=Sequence derived from alignment at F-serratus_M_contig7337:13755..14534- (Fucus serratus male)back to top |