mRNA_F-serratus_M_contig730.18535.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig730.18535.1 vs. uniprot
Match: D7FXI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI5_ECTSI) HSP 1 Score: 191 bits (484), Expect = 1.930e-60 Identity = 102/130 (78.46%), Postives = 114/130 (87.69%), Query Frame = 1
Query: 1 VEGLGLGASSQSSAPGIFAAIVFHKGLVAFSLGCIFFSTEISRLQYFLFMGIFSLLTPLGAIAGIIVRAHSEGST-GAGICTALGAGTFLHVAAMEVLPRDLLHDQRMKKTKMVALVLGYLVFAWLSLYV 387
+EGLGLGASS+S+APGIFAAIV HKGL AFSLGCIFFS+E SRLQ+FL MG+FSLLTPLGA G++VRA S+GS+ GAG+CTALGAGTFLHVAAMEVLPR+LLHD RMK TKM LV GYL FA LS YV
Sbjct: 1 MEGLGLGASSESAAPGIFAAIVVHKGLAAFSLGCIFFSSECSRLQFFLCMGVFSLLTPLGAALGMLVRASSDGSSAGAGVCTALGAGTFLHVAAMEVLPRELLHDSRMKNTKMACLVGGYLSFAALSRYV 130
BLAST of mRNA_F-serratus_M_contig730.18535.1 vs. uniprot
Match: A0A6H5JI31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI31_9PHAE) HSP 1 Score: 191 bits (486), Expect = 2.660e-55 Identity = 102/130 (78.46%), Postives = 114/130 (87.69%), Query Frame = 1
Query: 1 VEGLGLGASSQSSAPGIFAAIVFHKGLVAFSLGCIFFSTEISRLQYFLFMGIFSLLTPLGAIAGIIVRAHSEGST-GAGICTALGAGTFLHVAAMEVLPRDLLHDQRMKKTKMVALVLGYLVFAWLSLYV 387
+EGLGLGASS+S+APGIFAAIV HKGL AFSLGCIFFS+E SRLQYFL MG+FSLLTPLGA G++VRA S+GS+ GAG+CTALGAGTFLHVAAMEVLPR+LLHD R+K TKM LV GYL FA LS YV
Sbjct: 510 MEGLGLGASSESAAPGIFAAIVVHKGLAAFSLGCIFFSSECSRLQYFLCMGVFSLLTPLGAAVGMLVRASSDGSSAGAGVCTALGAGTFLHVAAMEVLPRELLHDSRLKNTKMACLVGGYLSFAALSRYV 639
BLAST of mRNA_F-serratus_M_contig730.18535.1 vs. uniprot
Match: A0A7S2USU1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USU1_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.290e-21 Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 1
Query: 1 VEGLGLGASSQSSAPGIFAAIVFHKGLVAFSLGCI----FFSTEISRLQYFLFMGIFSLLTPLGAIAGIIVRAHSEGSTGAGICTALGAGTFLHVAAMEVLPRDLLHDQRM--KKTKMVALVLGYLVFA 369
VEGLGLGAS Q+ G+F AIV HK + A S+G + + IS++ + F++ TP+GAI GI + E + G G+CTALGAGTFLHVA ME++P +L D+R K TK++ + +G+ +FA
Sbjct: 76 VEGLGLGAS-QAHQFGVFIAIVSHKTMAAMSVGALLSQAYTQRIISQVHMIFLITAFAIATPVGAILGICIDDLLEDTAGPGVCTALGAGTFLHVATMEIIPHEL-EDKRYASKPTKLLVMAVGFSLFA 202
BLAST of mRNA_F-serratus_M_contig730.18535.1 vs. uniprot
Match: A0A6G0W9N2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9N2_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 8.530e-21 Identity = 55/128 (42.97%), Postives = 84/128 (65.62%), Query Frame = 1
Query: 1 VEGLGLGASSQSSAPGIFAAIVFHKGLVAFSLGCIFFSTEISRLQYFLFMGIFSLLTPLGAIAG--IIVRAHSEGSTGAGICTALGAGTFLHVAAMEVLPRDLLHDQRMKKTKMVALVLGYLVFAWLS 378
+EGLG+GA S +SA G++AAIV HKGL AF+LG +++++ ++ +M +FS+++ +G I G I SE S AGIC AL +GTF++VA ME++P + H R TK + L+ GY +F L+
Sbjct: 183 LEGLGIGAQS-TSAWGVYAAIVLHKGLAAFALGSGMLKSQVNKTKFLAYMFLFSMMSIIGIIIGWSISDTEESEESASAGICIALASGTFIYVAVMEIIPLEFSHG-RSDVTKTLLLLFGYAIFGCLA 308
BLAST of mRNA_F-serratus_M_contig730.18535.1 vs. uniprot
Match: A0A8K1CEN8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEN8_PYTOL) HSP 1 Score: 93.2 bits (230), Expect = 5.500e-20 Identity = 59/134 (44.03%), Postives = 82/134 (61.19%), Query Frame = 1
Query: 1 VEGLGLGASSQSSAPGIFAAIVFHKGLVAFSLGCIFFSTEISRLQYFLFMGIFSLLTPLGAIAGIIVRAHS-EGSTGAGICTALGAGTFLHVAAMEVLPRDLLHD-------QRMKKTKMVALVLGYLVFAWLS 378
+EGLG+GA Q+SA G+F AIV HKGL AF+LG + +SR +M +FS ++ +G I G I+ A S E S AGIC AL +GTF++VA MEV+P++ +R+ K AL LGY +F L+
Sbjct: 219 LEGLGIGAQ-QTSAWGVFLAIVLHKGLAAFALGSGMVQSSLSRAHVIAYMVLFSFMSIIGIIVGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPQEFPRHAPSSPYVRRILVHKTSALCLGYAIFGLLA 351
BLAST of mRNA_F-serratus_M_contig730.18535.1 vs. uniprot
Match: A0A485KNB2_9STRA (Aste57867_9465 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNB2_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 2.210e-18 Identity = 51/129 (39.53%), Postives = 83/129 (64.34%), Query Frame = 1
Query: 1 VEGLGLGASSQSSAPGIFAAIVFHKGLVAFSLGCIFFSTEISRLQYFLFMGIFSLLTPLGAIAGIIVR---AHSEGSTGAGICTALGAGTFLHVAAMEVLPRDLLHDQRMKKTKMVALVLGYLVFAWLS 378
+EGLG+GA + ++A G+F AI+ HKGL AF+LG +++++ ++ +M +FS+++ +G + G + SE S AGIC AL +GTF++VA ME++P + H R TK + L+ GY VF L+
Sbjct: 174 LEGLGIGAQN-TTAWGVFLAIIMHKGLAAFALGSGMLKSQVNKTKFIGYMFLFSMMSIVGIVIGWGISDASESSEDSAAAGICLALASGTFIYVAVMEIIPLEFSHG-RSDVTKTLLLLFGYAVFGCLA 300
BLAST of mRNA_F-serratus_M_contig730.18535.1 vs. uniprot
Match: A0A662Y4D4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4D4_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 2.450e-18 Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 1
Query: 1 VEGLGLGASSQSSAPGIFAAIVFHKGLVAFSLGCIFFSTEISRLQYFLFMGIFSLLTPLGAIAGIIVRAHS-EGSTGAGICTALGAGTFLHVAAMEVLPR----------DLLHDQRMKKT--KMVALVLGYLVFAWLS 378
+EGLG+GA +QS A G+F AIV HKGL AF+LG + + L+M +FS ++ +G I G I+ A S E S AGIC AL +GTF++VA MEV+P+ D Q++ T K +ALV GY +F L+
Sbjct: 200 LEGLGIGAQTQS-AWGVFFAIVVHKGLAAFALGSGLVQSAMPAAHVMLYMVVFSFMSIIGIIVGWIIAADSSEDSAAAGICVALASGTFIYVAVMEVIPQEFPRHGHGDDDRHSPQKVDLTTQKSLALVAGYAIFGLLA 337
BLAST of mRNA_F-serratus_M_contig730.18535.1 vs. uniprot
Match: M4BMB1_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BMB1_HYAAE) HSP 1 Score: 85.5 bits (210), Expect = 3.660e-17 Identity = 52/128 (40.62%), Postives = 78/128 (60.94%), Query Frame = 1
Query: 1 VEGLGLGASSQSSAPGIFAAIVFHKGLVAFSLGCIFFSTEISRLQYFLFMGIFSLLTPLGAIAGIIVRAHSEGSTGAGICTALGAGTFLHVAAMEVLPRDLLHDQRMKKTKMVALVLGYLVFAWLSLY 384
+EG+G+GASS + A I AI+ HK L AF+L ++ R+Q + +FSL+TP+G + G ++ ++ + G+C AL GTFL VA ME++PR+L D R + K AL+ GY V LSL+
Sbjct: 223 MEGMGMGASS-TPAWDILIAILAHKSLAAFALALELLHHDVPRMQLLSSIAVFSLMTPMGILFGRLLVDTTQATPAGGVCAALAGGTFLFVAIMEIIPREL-QDPRYQLEKCSALLAGYGVMGVLSLW 348
BLAST of mRNA_F-serratus_M_contig730.18535.1 vs. uniprot
Match: A0A8J4AZN8_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AZN8_9CHLO) HSP 1 Score: 84.3 bits (207), Expect = 1.530e-16 Identity = 52/129 (40.31%), Postives = 76/129 (58.91%), Query Frame = 1
Query: 1 VEGLGLGA-SSQSSAPGIFAAIVFHKGLVAFSLGCIFFSTEISRLQYFLFMGIFSLLTPLGAIAGIIVRAHSEGSTGAGICTALGAGTFLHVAAMEVLPRDLLHDQRMKKTKMVALVLGYLVFAWLSLY 384
+EG+ LGA SS S I AI HKGL A++LG + S +++ +G FSL TPLG AG + S T +AL +GTFL+VA MEV+P++L D + + KM A +LGY + + L+++
Sbjct: 296 LEGMALGAQSSMRSTEDIMVAIAAHKGLAAYALGASIMESGASSERFWTVIGCFSLATPLGIFAGYGMSTRSANGTSGAALSALASGTFLYVAFMEVIPKELA-DGKHRMAKMAAFLLGYSLMSLLAVW 423
BLAST of mRNA_F-serratus_M_contig730.18535.1 vs. uniprot
Match: A0A8J4GAD1_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GAD1_9CHLO) HSP 1 Score: 84.0 bits (206), Expect = 2.190e-16 Identity = 52/129 (40.31%), Postives = 76/129 (58.91%), Query Frame = 1
Query: 1 VEGLGLGA-SSQSSAPGIFAAIVFHKGLVAFSLGCIFFSTEISRLQYFLFMGIFSLLTPLGAIAGIIVRAHSEGSTGAGICTALGAGTFLHVAAMEVLPRDLLHDQRMKKTKMVALVLGYLVFAWLSLY 384
+EG+ LGA SS S I AI HKGL A++LG + S +++ +G FSL TPLG AG + S T +AL +GTFL+VA MEV+P++L D + + KM A +LGY + + L+++
Sbjct: 307 LEGMALGAQSSMRSTEDIMVAIAAHKGLAAYALGASIMESGASSERFWTVIGCFSLATPLGIFAGYGMSTRSANGTSGAALSALASGTFLYVAFMEVIPKELA-DGKHRLAKMAAFLLGYSLMSLLAVW 434 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig730.18535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig730.18535.1 >prot_F-serratus_M_contig730.18535.1 ID=prot_F-serratus_M_contig730.18535.1|Name=mRNA_F-serratus_M_contig730.18535.1|organism=Fucus serratus male|type=polypeptide|length=130bp VEGLGLGASSQSSAPGIFAAIVFHKGLVAFSLGCIFFSTEISRLQYFLFMback to top mRNA from alignment at F-serratus_M_contig730:92293..98194+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig730.18535.1 ID=mRNA_F-serratus_M_contig730.18535.1|Name=mRNA_F-serratus_M_contig730.18535.1|organism=Fucus serratus male|type=mRNA|length=5902bp|location=Sequence derived from alignment at F-serratus_M_contig730:92293..98194+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig730:92293..98194+ >mRNA_F-serratus_M_contig730.18535.1 ID=mRNA_F-serratus_M_contig730.18535.1|Name=mRNA_F-serratus_M_contig730.18535.1|organism=Fucus serratus male|type=CDS|length=780bp|location=Sequence derived from alignment at F-serratus_M_contig730:92293..98194+ (Fucus serratus male)back to top |