prot_F-serratus_M_contig730.18534.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig730.18534.1
Unique Nameprot_F-serratus_M_contig730.18534.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length224
Homology
BLAST of mRNA_F-serratus_M_contig730.18534.1 vs. uniprot
Match: A0A6H5JI31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI31_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 3.740e-9
Identity = 34/51 (66.67%), Postives = 41/51 (80.39%), Query Frame = 0
Query:   77 MHLLPEAQESLEKLSEEFGFEFALFFASLGFIAVFLLEEVVEKVSASVNPH 127
            MHLLPEA+E LE LS E+ FE A FFASL FI +FLLEE+V +VS+S NP+
Sbjct:    1 MHLLPEAEEGLENLSAEWQFELAPFFASLAFILMFLLEELVSQVSSSFNPY 51          
BLAST of mRNA_F-serratus_M_contig730.18534.1 vs. uniprot
Match: A0A2J6IES3_9BACT (Uncharacterized protein n=1 Tax=Marinilabiliales bacterium TaxID=2053303 RepID=A0A2J6IES3_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 1.220e-5
Identity = 29/79 (36.71%), Postives = 41/79 (51.90%), Query Frame = 0
Query:   56 GNQWTSVLNVMSGGIFVAAGFMHLLPEAQESLEKLSEEFGFEFALFFASLGFIAVFLLEEVVEKVSASVNPHKDYTSIP 134
            G    S  N  +GG+F+ AGFMH+LP+A  + + L     F FA   A LGFI +  LE V+    ++    K+ T  P
Sbjct:   39 GGNGLSFGNAFAGGVFLGAGFMHMLPDANSNFQLLKLNIDFPFAEMIAGLGFILILSLERVIANKESTEILEKEKTGFP 117          
BLAST of mRNA_F-serratus_M_contig730.18534.1 vs. uniprot
Match: A0A0D2JG31_9CHLO (ZIP family transporter n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JG31_9CHLO)

HSP 1 Score: 55.8 bits (133), Expect = 1.590e-5
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 0
Query:   59 WTSVLNVMSGGIFVAAGFMHLLPEAQESLEKLSEEFGFEFALFFASL--GFIAVFLLEEVVEKVSASVNPH 127
            W S+LN  SGG+FVAAG +HLLP  QES ++L    G E+ L+   +  G++ V  +E V+  V  + + H
Sbjct:  179 WLSLLNCFSGGVFVAAGLIHLLPHCQESQQRLPALAGVEYPLYLVLIVGGYMLVLFVERVLFSVHDAAHAH 249          
BLAST of mRNA_F-serratus_M_contig730.18534.1 vs. uniprot
Match: A0A383VSV3_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VSV3_TETOB)

HSP 1 Score: 55.1 bits (131), Expect = 2.940e-5
Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = 0
Query:   59 WTSVLNVMSGGIFVAAGFMHLLPEAQESLEKLSEEFG-FEFALFFASLGFIAVFLLEEVVEKVSASVNPHKDYTSI 133
            W S+LN  SGG+F+AAG +HLLP   E+ ++L    G +   L   +LG++ V  +E V+  V  S + H  +T I
Sbjct:  181 WLSLLNCFSGGVFLAAGLVHLLPHCAEAQQRLGSLVGDYPLYLVLITLGYMLVLFVERVLFDVHGSAHGHGPHTGI 256          
BLAST of mRNA_F-serratus_M_contig730.18534.1 vs. uniprot
Match: A0A7J7Q3Q0_9CHLO (Zinc/iron permease n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q3Q0_9CHLO)

HSP 1 Score: 54.7 bits (130), Expect = 3.720e-5
Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = 0
Query:   59 WTSVLNVMSGGIFVAAGFMHLLPEAQESLEKLSEEFG-FEFALFFASLGFIAVFLLEEVVEKVSASVNPHKDYTSI 133
            W S+LN  SGG+F+AAG +HLLP   E+ ++L    G +   L   +LG++ V  +E V+  V  S + H  +T I
Sbjct:   64 WLSLLNCFSGGVFLAAGLVHLLPHCAEAQQRLGPLVGDYPLYLVLITLGYMLVLFVERVLFDVHGSAHGHGPHTGI 139          
BLAST of mRNA_F-serratus_M_contig730.18534.1 vs. uniprot
Match: A0A2V0PCJ0_9CHLO (Zinc permease n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PCJ0_9CHLO)

HSP 1 Score: 54.7 bits (130), Expect = 3.830e-5
Identity = 32/84 (38.10%), Postives = 49/84 (58.33%), Query Frame = 0
Query:   59 WTSVLNVMSGGIFVAAGFMHLLPEAQESLEKLSEEFGFEFALFFASL--GFIAVFLLEEVVEKVSASVNPHKDYTSIPSTAGSE 140
            W S+LN  SGG+FVAAG +HLLP  QE+ ++L    G ++ L+   +  G++ V  +E V+  V  + + H  +T I S   SE
Sbjct:  181 WLSLLNCFSGGVFVAAGLVHLLPHCQEAQQQLPALAGTDYPLYLVLIVGGYMLVLFVERVLFSVHDAAHAHT-HTGIVSRVASE 263          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig730.18534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JI31_9PHAE3.740e-966.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2J6IES3_9BACT1.220e-536.71Uncharacterized protein n=1 Tax=Marinilabiliales b... [more]
A0A0D2JG31_9CHLO1.590e-540.85ZIP family transporter n=1 Tax=Monoraphidium negle... [more]
A0A383VSV3_TETOB2.940e-538.16Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7J7Q3Q0_9CHLO3.720e-538.16Zinc/iron permease n=1 Tax=Scenedesmus sp. NREL 46... [more]
A0A2V0PCJ0_9CHLO3.830e-538.10Zinc permease n=1 Tax=Raphidocelis subcapitata Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003689Zinc/iron permeasePFAMPF02535Zipcoord: 56..140
e-value: 1.0E-13
score: 51.3
NoneNo IPR availablePANTHERPTHR11040:SF137ZINC TRANSPORTER ZIP3coord: 46..138
NoneNo IPR availablePANTHERPTHR11040ZINC/IRON TRANSPORTERcoord: 46..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 114..224
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..94
NoneNo IPR availableTMHMMTMhelixcoord: 62..79
NoneNo IPR availableTMHMMTMhelixcoord: 94..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig730contigF-serratus_M_contig730:61301..88797 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig730.18534.1mRNA_F-serratus_M_contig730.18534.1Fucus serratus malemRNAF-serratus_M_contig730 61301..88797 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig730.18534.1 ID=prot_F-serratus_M_contig730.18534.1|Name=mRNA_F-serratus_M_contig730.18534.1|organism=Fucus serratus male|type=polypeptide|length=224bp
SNRFHRSTGTLLLPGLGLESYMRQSSRCWDTWLPGRGYRWRVVCPMLVGG
GNDGKGNQWTSVLNVMSGGIFVAAGFMHLLPEAQESLEKLSEEFGFEFAL
FFASLGFIAVFLLEEVVEKVSASVNPHKDYTSIPSTAGSEGIRSNGKKPT
AAAAAPLHPSRCHLDRFQFQPTDGGGESCHHCGIDRSISVSSTSSAGGAG
GAGGAFREGGVWSGGGENGTGSGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003689ZIP