mRNA_F-serratus_M_contig73.18520.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig73.18520.1 vs. uniprot
Match: D7FZX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX1_ECTSI) HSP 1 Score: 801 bits (2068), Expect = 2.040e-250 Identity = 665/1918 (34.67%), Postives = 894/1918 (46.61%), Query Frame = 1
Query: 712 MASDSDFVGASGSALVDFFPPDAKLYRNPFVLAHNLDDIIAVYSTNDPHTSGGSRSGVDGSIENVS--VGEGALSG---KAYLDMRRVVAAAEIIVAEEARERVDTVGTGQERTEAREHAFSSSE------DDNGVLSDNGTTAPENNANSALLS---RSDGFGHGRPQNR-------SAESKLNTEILFMENRSDKEGGGRLSLDKSERNSAAALCKSRGYPAR------KLKRGSRDKLSSDLLAPEHSRDKNRAWSGTFEGRG----HQYD--IDGNGDRTRAPKTSKKPVHRGPWVPLLLDTNVSCLEGFNEVVSEGCVLWQINKSDRIRIGSCKGQVWKVERVAAIENGNGKCLIVLSEPYLHSKANRDQQVSQIETAPEKAQQHLPADANLSTPKTAVPAMAASRSRRKKLAQRRIDKKGRSAGA-AAIAVLGTMVTQKAAPAASNRLGSPRQPT--GSERRSGQAARNVAK-----HRRIIRRATLSASMASTASTIATLYERPLSSPAAMGGARRKGNLRQWRTWSGSCVGATKKASELE-----------------------------NYITRNLAVFERNLTGLNTPKGFNGKGASEERRPSYVEGFKADSKAIHIYQRE--------QGKPPEPVGFDALYVYESIEIDNGVKGGLLEDTSIAGGEELHRFSNDTRNSKWMPGAERKSISTDGHVEVA-ARMVGVGGLTKCQRLWKMVPQATDNRPAWLREYEEGSVAYGSDYQDPDGLAKKAVLFRVPLSWAHLELIVKDRPSIRRFPAFQSKQRVTFFRKLRVQDLIKVAYQYVVAGGEISGVTDGPPTPHRLRCRNRASAGLNIRGWHRLVMALGYIADVTKPTRHHVIDQIYRQRTRQYKAEQRKIGAQAARKNAKQNAVDRVLSRRLAAQGDASTDKHHFTSLPDNLPSDVCIQAFNAVLGGVVSSQSKQQLTRLPSLGAGSR-ANSALSGKRLDPER---ATISNVGVRPEDNKTGDDATKGVEPVEFVCVEIEAVSCWSARNNSK---CGRLRQDLFRRKSGSQLPVGLPGGGRRGT------DIAVGERNFVRTIEQVVLTHVQDQDLRMNVAGFKDALNALVAYKYPHRELDSA----LKDLVFNYLLVRPELEGIKQMAWLKAKGAAILAEAPMQCAAVRIQAVWRGKRQLWLYRAKQAACLRLQIWVRMEVKRSQYHRKLHQLEALRVAVRQNDASTTIQRLIRQRIWLLRFEEMCCRRRQESLRRWADWRAENRRKRRIREQVNDSRALCQAKSRKNPRLILYRKLPCPVVLATYFGPFLLPAPRNPWDVGVQQGLELPSISEAFDLFGLDTPQPSPQAIVFRQSRSFNGCMVMITTSRKKTRSLELHVKAYVPTTQETFRFDIKGDELQYRLCRALNTDSLSVNEVLANLELVAASLSCRKQINGRRWIVSMTKRVTAEAGTLVYREIRQLDGVIYCFKMYRSSTNVVVTAYEPRQCETLRTTVPIRGSYGLAVWIKWEVETSARNRRMKLIIRLAEAQKILKLHELGVEVPQSKLIAAKRLCQAIAHYKSSVAAAEATADEGKASGAREPGCICVEKMAPVTASLVNIPPLASTAQSAGMHYASNSGEFQ----VSAVYCP--DPQLTGLGSLPFAWYDGSVDDLEMFG-AEPLETDKVASAPNIALTVRGQEVTLARWILRRLKVERVQVEKMKLPTCADGRGDDVTEDGNTEGAENGRRKPPLGSKKVVKWERVLVTSYEVETKRRNMAASRVQGLFRMKRAREAARAKVFSQFEKFFDADSGAYYYHNSKTGVSTFTKPRVLREDQDLEDPTDDWTQQRDHLGRHSYTNPNTGQ*SWFSVPEVNAVIVRACRRYLRAFFGVSSREAAERGRWFAREAEISWKRGGGDLASTLNYALVRPT 6156
MA+D+DF+GA GS L + FPPD KLYRNPF+L HNLDD +A+++ N GV G++ + GEGALS K+ LD +RV AA IVAEEA+ER G+ + TE HA +SE D GV + +G + + + RSD G GR S + I F + + EGG S S+ A ++ G A KLKRG + K S + + + D + S T G H + G D K K+P ++GPW DRIRIG C G W+V V + NG GKC + LSE Y H+K + ++ E Q PA A+ S+ P + + A+ + G + A A +G P+A+ S P G ++ S A +V H A S S A+ AT+ + + A G ++ +R R + S G + RNL +FE+NL GL PKG GKGA RR S + G+KA S+A+ +R +GKP +P + E + D+ L ++ S R S R S+ MPGAER+ +GH GVGGL KCQR+WKMVPQA D RP WLR+YE+GS+ YGS YQ+ G +K V FRV LSWA +ELIV DRP+ RRF F+ KQR TFFRKL++ DL+ +AY+ VA G + G P A L+++ WH+ V++LG+IADV++P RHH I+QI+RQRTRQYKAE RK+ AQAA++ +Q A +R +RRLAA G+A+ + N P G SS S + + P + S A +A G+ D + AT + + S R NS GR R + G D V + VR +QVV+ HV DQDLRM++AGFKDAL+ALV + P E + L+DLVFN++L+RPELEG+++MAWL+AK W+RM VKR QY +L +LEALR+A + ASTTIQ R+ WL +F +C +RR E+LRR +WRA RRKRR RE+ D+ Q Y++L S NG RF I L +LCR L T+SLS E+L NL+ VAA LSCRKQ +GRRW+VS KRV AE+G+LVYR +LDGV Y K+YRS+T+V VTAYEP++CETLR +PIRG+ G++VWI+WEVET+ RR +L RL E QKILKLHE+ VE+ + KL+AA+RL A+ ++ + AA+ T+ + G P D +LTG+G+LPF WYDG+V DLE+FG PLETD+VASAP+ VLVT YE+ET+RRN+AASRVQGL RM++AR+ AR+++ SQFEK FD SG +YYH++KT + TF KP +LR DQDLE+P D+W +Q+D G+ YTNP TGQ S+ SVPE AVIV+ACR +L+AF+G+ + ERG F++EAE +W +GGG LASTLNYALV T
Sbjct: 1 MATDTDFIGAPGSVLAEIFPPDTKLYRNPFILGHNLDDTLALFTGN----------GVGGAVSPRARDSGEGALSPSQTKSRLDKQRVRLAAVAIVAEEAKER-SRRGSKRHMTE---HARETSEVVGATGDIGGVPNRSGVEGHDLTRSISPPQDGQRSDRSGSGRDDGHLGDDGKVSKRRRGKGGITFQDQQG--EGGQADSQPGSDGAGNAESPQAAGKRAHXXXXXGKLKRGRKAKTISHIEVDDDACDVRTSESATKPGSANVTKHSWHGRSGGGADWKTIAKAIKEPAYKGPW------------------------------GDRIRIGCCTGHEWEVRGVIVVPNGKGKCRVALSEVYNHAKGQEG--MGRVADVGEDVGQFHPAVASSSS----APRLPGA-------AESIATEAGEGSRADPATTHVGQQPAGMPIPSAAKETRSEATPAVDGEDKGSSPVAPSVTAAPGEAHPTTGEEAERS-SPGGRAALEATIKTKTGRAKLAGGNKKQLDGVR--RAGARSTQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKHAARNLEIFEQNLEGLALPKGVAGKGAGSGRRRSLLGGYKAHSEAVQESRRRHPKTPPPARGKPHDPSTNSTVAEPEDQDHDDD---HLPKNRSRTPDNRSRRMSYAPRESERMPGAERRGGLKEGHGGGGIGGXSGVGGLAKCQRVWKMVPQARDKRPTWLRQYEDGSIPYGSHYQNYAGRRQKEVHFRVRLSWAKVELIVTDRPNARRFADFRPKQRYTFFRKLKLDDLLAIAYRETVASGGVPGTEKSP-------------AELDLKSWHKFVVSLGFIADVSQPARHHDIEQIFRQRTRQYKAELRKLEAQAAKERERQLAEERAHARRLAAMGEAAAGTDDHKAQQPNRPKSAA-----GARTGTPSSASASAVRKAPEVSRSSTGARTASRGRDADGKSIGGATQGRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGTSQRGNSPGTPSGRARGHHQAAEGGGXXXXXXXXXXXXXXXXXXXXDAPV---DSVRNHQQVVMKHVLDQDLRMDLAGFKDALSALVILRNPELEQRKSQVEGLRDLVFNHVLIRPELEGVREMAWLQAK-----------------------------------------TWIRMAVKRKQYLAELRRLEALRIAALRKAASTTIQTWFRRLSWLWKFAAVCEKRRLETLRRLREWRAVKRRKRRRREEGFDTAMYTQR----------YQRL----------------------------------------------------------SMISNG------------------------------RFVITEKALHAQLCRTLKTESLSGAEILENLDKVAARLSCRKQRDGRRWVVSRAKRVAAESGSLVYRVASRLDGVFYFLKVYRSATDVAVTAYEPKRCETLRVVLPIRGARGISVWIEWEVETATLRRRRELSRRLGEVQKILKLHEMNVEIERPKLLAARRLGSAVQEREAPLPAADTTSKAKRLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTAEAPPTDAELTGMGALPFVWYDGAVPDLELFGDGTPLETDEVASAPD-----------------------------------------------------------------------VLVTFYEIETQRRNLAASRVQGLSRMRQARDRARSRILSQFEKRFDVYSGKFYYHSNKTKIDTFVKPSLLRPDQDLEEPADEWIEQKDRSGKTFYTNPATGQRSFLSVPEAAAVIVKACRYHLQAFYGIPGPDVIERGIRFSQEAEEAWVQGGGRLASTLNYALVLHT 1622
BLAST of mRNA_F-serratus_M_contig73.18520.1 vs. uniprot
Match: A0A6H5KPG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG2_9PHAE) HSP 1 Score: 308 bits (788), Expect = 2.910e-87 Identity = 160/280 (57.14%), Postives = 207/280 (73.93%), Query Frame = 1
Query: 5320 DPQLTGLGSLPFAWYDGSVDDLEMFG-AEPLETDKVASAPNIALTVRGQEVTLARWILRRLKVERVQVEKMKLPTCADGRGDDVTEDGNTEGAENGRRKPPLGSKKVVKWERVLVTSYEVETKRRNMAASRVQGLFRMKRAREAARAKVFSQFEKFFDADSGAYYYHNSKTGVSTFTKPRVLREDQDLEDPTDDWTQQRDHLGRHSYTNPNTGQ*SWFSVPEVNAVIVRACRRYLRAFFGVSSREAAERGRWFAREAEISWKRGGGDLASTLNYALVRPT 6156
D +LTG+G+LPF WYDG+V DLE+FG PLETD+VASAP I +T RG+EVTLARWILRR+KV+RV+V +++LP C G ++ + R+P V +WERVLVT YE+E +RRN+AASRVQGL RM++AR+ AR+++ SQFEK FD SG +YYH++KT V TF KPR+LR DQDLE+P D+W +Q+D G+ YTNP TGQ S+ SVPE AVIV+ACR +L+AF+G+ + ERG F+ EAE +W +GGG LASTLNYALV T
Sbjct: 99 DAELTGMGALPFVWYDGAVPDLELFGDGTPLETDEVASAPEIDITARGREVTLARWILRRIKVDRVRVVEVELP-CGGGXXXXXXXXXXSKQKQKVARRP------VARWERVLVTFYEIEMQRRNLAASRVQGLSRMRQARDRARSRILSQFEKRFDVYSGKFYYHSNKTKVDTFVKPRLLRPDQDLEEPADEWIEQKDRSGKTFYTNPATGQRSFLSVPEAAAVIVKACRYHLQAFYGIPGPDVIERGIRFSHEAEEAWVQGGGRLASTLNYALVLHT 371
BLAST of mRNA_F-serratus_M_contig73.18520.1 vs. uniprot
Match: A0A7S4MCK5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCK5_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 4.990e-11 Identity = 56/171 (32.75%), Postives = 87/171 (50.88%), Query Frame = 1
Query: 5656 LVTSYEVETKRRNMAASRVQGLFRMKRAREAARAKVFSQFEKFFDADSGAYYYHNSKTGVSTFTKPRVLREDQDLEDPTDDWT---QQRDHLGRHS--YTNPNTGQ*SWFSVPEVNAVIVRACRR-YLRAFFGVS-SREAAERGRWFAREAEISWKRGGGDLASTLNYALV 6147
L+ E E ++R A+ +Q ++R + AR+ A+ V QFEK +D + + Y N KTG +KP +L D DL+DP D+W Q + GR Y+NP TGQ SWFS + ++ R R R G + R F R+ E +++ L+ +N+AL+
Sbjct: 192 LILQCEAEDEKRERIAATIQSIWRKRDARQKAKNAVHRQFEKIYDREKRTHCYVNVKTGARQHSKPTLLGPD-DLDDPKDEWQMIEQYDEKTGRSVIFYSNPATGQTSWFSEEDAARMVQRRFRECQTREVIGSTLDFSRVVRAVQFIRKTEENFRICPSKLSHQVNFALL 361
BLAST of mRNA_F-serratus_M_contig73.18520.1 vs. uniprot
Match: G4ZXT4_PHYSP (Peptidylprolyl isomerase n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZXT4_PHYSP) HSP 1 Score: 70.9 bits (172), Expect = 1.890e-8 Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 5671 EVETKRRNMAASRVQGLFRMKRAREAARAKVFSQFEKFFDADSGAYYYHNSKTGVSTFTKPRVLREDQDLE 5883
EV+ R AA+ +Q +FR ++AR R + S FEKF+DADSG YYY + +TG +T+ KPRVLR D D+E
Sbjct: 18 EVQEAREQQAAACLQRMFRCRKARLRLRQMLASVFEKFYDADSGLYYYLDKRTGETTWEKPRVLRGDDDIE 88
BLAST of mRNA_F-serratus_M_contig73.18520.1 vs. uniprot
Match: H3HCH1_PHYRM (Peptidylprolyl isomerase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HCH1_PHYRM) HSP 1 Score: 70.5 bits (171), Expect = 3.280e-8 Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 5671 EVETKRRNMAASRVQGLFRMKRAREAARAKVFSQFEKFFDADSGAYYYHNSKTGVSTFTKPRVLREDQDLE 5883
EV+ R AA+ +Q +FR ++AR R + S FEKF+DADSG YYY + +TG +T+ KPR LR D D+E
Sbjct: 24 EVQEAREQQAAACLQRMFRCRKARVRLRQMLASVFEKFYDADSGLYYYLDKRTGETTWEKPRALRSDDDIE 94
BLAST of mRNA_F-serratus_M_contig73.18520.1 vs. uniprot
Match: A0A329SI38_9STRA (Peptidylprolyl isomerase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SI38_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 5.600e-8 Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 1
Query: 5677 ETKRRNMAASRVQGLFRMKRAREAARAKVFSQFEKFFDADSGAYYYHNSKTGVSTFTKPRVLREDQDLE 5883
E KR AA+ +Q +FR ++AR R + S FEKF+DADSG YYY + +TG +T+ KPR LR D D+E
Sbjct: 19 EEKREQQAAACLQRMFRCRKARLRLRQMLASVFEKFYDADSGLYYYLDKRTGETTWEKPRALRGDDDIE 87
BLAST of mRNA_F-serratus_M_contig73.18520.1 vs. uniprot
Match: A0A8J5IWJ2_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IWJ2_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 8.890e-8 Identity = 35/69 (50.72%), Postives = 48/69 (69.57%), Query Frame = 1
Query: 5677 ETKRRNMAASRVQGLFRMKRAREAARAKVFSQFEKFFDADSGAYYYHNSKTGVSTFTKPRVLREDQDLE 5883
E KR + AA+ +Q +FR ++AR R + S FEKF+DADSG YYY + +TG +T+ KPR LR D D+E
Sbjct: 418 EEKREHKAAACLQRMFRCRKARLRLRQMLASVFEKFYDADSGLYYYLDKRTGETTWEKPRALRGDDDIE 486
BLAST of mRNA_F-serratus_M_contig73.18520.1 vs. uniprot
Match: A0A6G0RJR1_9STRA (Peptidylprolyl isomerase n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RJR1_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.020e-7 Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 5671 EVETKRRNMAASRVQGLFRMKRAREAARAKVFSQFEKFFDADSGAYYYHNSKTGVSTFTKPRVLREDQDLE 5883
EV R AA+ +Q +FR ++AR R + S FEKF+DA+SG YYY + +TG +T+ KPRVLR D D+E
Sbjct: 494 EVHEVREQQAAACLQRMFRCRKARVRLRQMLASVFEKFYDAESGLYYYLDKRTGETTWDKPRVLRGDDDVE 564
BLAST of mRNA_F-serratus_M_contig73.18520.1 vs. uniprot
Match: A0A662YFG7_9STRA (Peptidylprolyl isomerase (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFG7_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 2.290e-7 Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 5671 EVETKRRNMAASRVQGLFRMKRAREAARAKVFSQFEKFFDADSGAYYYHNSKTGVSTFTKPRVLREDQDLE 5883
EV R AA+ +Q LFR +RAR RA + S FEKF+DA+SG YYY + ++G + + KPRVLR D D+E
Sbjct: 28 EVREAREQAAAACLQRLFRCRRARLRLRALLASVFEKFYDAESGLYYYLDKRSGETMWEKPRVLRGDDDIE 98
BLAST of mRNA_F-serratus_M_contig73.18520.1 vs. uniprot
Match: A0A8K1CP01_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP01_PYTOL) HSP 1 Score: 67.0 bits (162), Expect = 2.970e-7 Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 5698 AASRVQGLFRMKRAREAARAKVFSQFEKFFDADSGAYYYHNSKTGVSTFTKPRVLREDQDLE 5883
AA+ +Q LFR + AR+ + + S FEKF+D DSG YYYHN++TG +T+ KPR+L+ + D+E
Sbjct: 26 AAATIQRLFRGRHARQQFQLVLSSVFEKFYDEDSGLYYYHNTRTGETTWEKPRMLKGEADVE 87 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig73.18520.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig73.18520.1 >prot_F-serratus_M_contig73.18520.1 ID=prot_F-serratus_M_contig73.18520.1|Name=mRNA_F-serratus_M_contig73.18520.1|organism=Fucus serratus male|type=polypeptide|length=1987bp MSTSTSRPAHKLAVDNLKDEANEKARMREASLAGLRDLLFPPESTSSPEAback to top mRNA from alignment at F-serratus_M_contig73:273659..289866+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig73.18520.1 ID=mRNA_F-serratus_M_contig73.18520.1|Name=mRNA_F-serratus_M_contig73.18520.1|organism=Fucus serratus male|type=mRNA|length=16208bp|location=Sequence derived from alignment at F-serratus_M_contig73:273659..289866+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig73:273659..289866+ >mRNA_F-serratus_M_contig73.18520.1 ID=mRNA_F-serratus_M_contig73.18520.1|Name=mRNA_F-serratus_M_contig73.18520.1|organism=Fucus serratus male|type=CDS|length=11922bp|location=Sequence derived from alignment at F-serratus_M_contig73:273659..289866+ (Fucus serratus male)back to top |