mRNA_F-serratus_M_contig73.18518.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig73.18518.1
Unique NamemRNA_F-serratus_M_contig73.18518.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig73.18518.1 vs. uniprot
Match: D7FZW9_ECTSI (Vacuolar protein sorting-associated protein 29 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZW9_ECTSI)

HSP 1 Score: 374 bits (961), Expect = 4.020e-125
Identity = 179/189 (94.71%), Postives = 185/189 (97.88%), Query Frame = 2 
Query:  110 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTTFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKAA 676
            MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQY+DLRTLAPNVHVVRGDFEESTTFPE+KVVQIGQFRVGL HGHQIVPWGDPNAL M QRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSA+E++AVPSFILLAVQG KCVTYVYELHGDQVEVSKSEFSKA+
Sbjct:    1 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYNDLRTLAPNVHVVRGDFEESTTFPETKVVQIGQFRVGLTHGHQIVPWGDPNALAMTQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSAVESDAVPSFILLAVQGAKCVTYVYELHGDQVEVSKSEFSKAS 189
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BLAST of mRNA_F-serratus_M_contig73.18518.1 vs. uniprot
Match: A0A7S2BTX2_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BTX2_9STRA)

HSP 1 Score: 313 bits (803), Expect = 2.450e-101
Identity = 144/190 (75.79%), Postives = 168/190 (88.42%), Query Frame = 2 
Query:  110 MAG-DFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTTFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKAA 676
            MAG DFGEL LV+GD HIPHR A IPEKFK+MLVPNKMQHVLCTGNLV K+Q+D+ R+LAPN+H+VRGDF+E + FPE+KVVQIGQF++GL+HGHQ+VPWGDP AL   QR++  DILISGHTH+N+VNE+ G+WFINPGSITGAYSALET+ VPSFILLAVQG K VTYVYEL GDQV VSKSE++K A
Sbjct:    1 MAGSDFGELALVIGDCHIPHRAAGIPEKFKRMLVPNKMQHVLCTGNLVSKEQFDEFRSLAPNMHIVRGDFDEQSNFPETKVVQIGQFKIGLVHGHQVVPWGDPLALAQVQREMDVDILISGHTHKNEVNEYEGKWFINPGSITGAYSALETDVVPSFILLAVQGNKVVTYVYELKGDQVNVSKSEYTKKA 190
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BLAST of mRNA_F-serratus_M_contig73.18518.1 vs. uniprot
Match: A0A7S3HCY7_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCY7_9STRA)

HSP 1 Score: 309 bits (792), Expect = 9.920e-100
Identity = 142/185 (76.76%), Postives = 163/185 (88.11%), Query Frame = 2 
Query:  119 DFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTTFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKA 673
            DFGEL LV+GD HIPHR A IPEKF++MLVPNKMQHVLCTGN+V K+QYD+L+ LAPNVHVVRG F+E +TFPE KV+QIGQF++GLIHGHQIVPWGD ++L + QRQL  DILI+GHTHRN+VNE+ G+WFINPGSITGAYS L TE  PSFILLA+QG K VTYVYELHGDQV+VSKSEF KA
Sbjct:    3 DFGELALVVGDFHIPHRAAGIPEKFQRMLVPNKMQHVLCTGNVVTKEQYDELKGLAPNVHVVRGGFDEDSTFPEYKVIQIGQFKIGLIHGHQIVPWGDAHSLAVIQRQLDVDILITGHTHRNEVNEYEGKWFINPGSITGAYSTLTTEVTPSFILLAIQGSKVVTYVYELHGDQVDVSKSEFCKA 187
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BLAST of mRNA_F-serratus_M_contig73.18518.1 vs. uniprot
Match: A0A7S2S7P2_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7P2_9STRA)

HSP 1 Score: 309 bits (791), Expect = 1.500e-99
Identity = 141/187 (75.40%), Postives = 167/187 (89.30%), Query Frame = 2 
Query:  110 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTTFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSK 670
            MA DFGELVLV+GD+ IPHR A+IPE+FK+MLVPNKMQHVLCTGNLV K+Q+D+ R+LAPN+HVV+GDF+++  FPE KVVQIGQFR+GLIHGHQ+VPWGDP AL+  QRQ+  DI+ISGHTHRN+VNE+ G+WFINPGSITGAYSA E + +PSFILLAVQG K VTYVYELHG++VEVSKSEF K
Sbjct:    1 MASDFGELVLVVGDVLIPHRAASIPEQFKRMLVPNKMQHVLCTGNLVTKEQFDEFRSLAPNMHVVKGDFDDNPLFPEQKVVQIGQFRIGLIHGHQVVPWGDPIALSTVQRQMDVDIIISGHTHRNEVNEYEGKWFINPGSITGAYSATEPDVIPSFILLAVQGNKVVTYVYELHGEKVEVSKSEFQK 187
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BLAST of mRNA_F-serratus_M_contig73.18518.1 vs. uniprot
Match: A0A7S2FLA0_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FLA0_9STRA)

HSP 1 Score: 306 bits (783), Expect = 4.450e-98
Identity = 141/190 (74.21%), Postives = 163/190 (85.79%), Query Frame = 2 
Query:  104 CGMAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTTFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKA 673
             G   DFGELVLV+GD HIPHR A IPEKFK+MLVPNKMQHVLCTGNLV K+QYD+ R LAPN+H+VRGDF+ES++FPE+KVVQIG F++GL HGHQIVPWGDP AL   QRQL  DIL++GHTH+N+VNE+ G+WFINPGSITGAYSALE++   SFILLAVQG K VTYVYEL  D+VEVSKSEF K+
Sbjct:   17 AGGGSDFGELVLVVGDCHIPHRAAMIPEKFKRMLVPNKMQHVLCTGNLVTKEQYDEFRNLAPNMHIVRGDFDESSSFPETKVVQIGNFKIGLAHGHQIVPWGDPLALAAVQRQLDVDILVTGHTHKNEVNEYEGKWFINPGSITGAYSALESDVTASFILLAVQGNKVVTYVYELRDDKVEVSKSEFQKS 206
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BLAST of mRNA_F-serratus_M_contig73.18518.1 vs. uniprot
Match: A0A7S3NIH3_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NIH3_9STRA)

HSP 1 Score: 300 bits (767), Expect = 5.800e-96
Identity = 137/188 (72.87%), Postives = 160/188 (85.11%), Query Frame = 2 
Query:  110 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTTFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKA 673
            M+ DFGELVLVLGD+HIPHR A IPEKF++MLVPNKMQHV+CTGNL  ++QYD+LR LAPN+HVV GD +E  +FPE K+V +GQFR+G+IHGHQIVPWGD N+L M QR+L  DILISGHTH+N V EF G+WFINPGSITGAYS+LE E  PSF+LLA+QG K V YVYELHGD VEVSKSEF K+
Sbjct:    1 MSKDFGELVLVLGDVHIPHRCAFIPEKFQRMLVPNKMQHVICTGNLCTREQYDELRALAPNIHVVAGDMDEGLSFPEHKIVTVGQFRIGVIHGHQIVPWGDKNSLAMTQRRLDVDILISGHTHKNLVQEFDGKWFINPGSITGAYSSLEPEVTPSFVLLAIQGKKVVIYVYELHGDNVEVSKSEFQKS 188
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BLAST of mRNA_F-serratus_M_contig73.18518.1 vs. uniprot
Match: A0A835ZKD1_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKD1_9STRA)

HSP 1 Score: 285 bits (728), Expect = 8.900e-90
Identity = 134/194 (69.07%), Postives = 161/194 (82.99%), Query Frame = 2 
Query:  116 GDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTT--FPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEA-----VPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKAA 676
            GDFGELVLVLGD+HIPHR AAIPEKF++MLVPNKM+HVLCTGNLV KD+Y++LR LAPNVHVV GDF++S    +PESKVV IG +R+GL+HGHQ+VPWGDP AL++ QRQL  DIL+SGHTHRN+V    GRW +NPGSITGAYS + +       VPSF+LLA+QG +CV YVYEL G QV+V+KSEF+K A
Sbjct:    2 GDFGELVLVLGDLHIPHRAAAIPEKFRRMLVPNKMKHVLCTGNLVTKDRYEELRALAPNVHVVSGDFDDSAAAAWPESKVVHIGAWRIGLVHGHQVVPWGDPAALSILQRQLDCDILVSGHTHRNEVRAHEGRWLVNPGSITGAYSPIASAPAAEPIVPSFMLLAIQGARCVAYVYELRGGQVDVTKSEFTKDA 195
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BLAST of mRNA_F-serratus_M_contig73.18518.1 vs. uniprot
Match: A0A485KLT9_9STRA (Vacuolar protein sorting-associated protein 29 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KLT9_9STRA)

HSP 1 Score: 283 bits (723), Expect = 2.510e-89
Identity = 128/187 (68.45%), Postives = 155/187 (82.89%), Query Frame = 2 
Query:  110 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTTFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSK 670
            MA DFGELVL++GDMHIPHR   IPEKFKKMLVPNKMQHVLCTGN+V K+Q+D+LR LAPNVH+VRGDF+E   +P+ KV+ IGQFR+GL HGHQIVPWGD ++L   QR+L  DIL++GHTH+ +++   G+WF+NPGSITGAYS   T+ VPSFIL+A+QG K V YVYEL GD V VSKSEF+K
Sbjct:    1 MAADFGELVLIVGDMHIPHRAVDIPEKFKKMLVPNKMQHVLCTGNMVTKEQFDELRDLAPNVHIVRGDFDELCNYPDKKVITIGQFRIGLCHGHQIVPWGDADSLAALQRKLNVDILVTGHTHQYKLHAQNGKWFVNPGSITGAYSNCTTDVVPSFILMAIQGPKIVAYVYELKGDNVVVSKSEFTK 187
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BLAST of mRNA_F-serratus_M_contig73.18518.1 vs. uniprot
Match: A0A067CJI0_SAPPC (Vacuolar protein sorting-associated protein 29 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJI0_SAPPC)

HSP 1 Score: 280 bits (716), Expect = 2.440e-88
Identity = 128/187 (68.45%), Postives = 153/187 (81.82%), Query Frame = 2 
Query:  110 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEESTTFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSK 670
            MA DFGELVL++GD HIPHR   IPEKFKKMLVPNKMQHVLCTGNLV K+ +D+LR LAPNVHVVRGDF+E+ TFP+ KVV IGQ+R+GL HGHQIVPWGD ++L   QR++  DIL++GHTH+ +++   G+WF+NPGSITGAY     + VPSFIL+A+QG K V YVYEL GD V VSKSEFSK
Sbjct:    1 MAADFGELVLIVGDYHIPHRAMDIPEKFKKMLVPNKMQHVLCTGNLVTKETFDELRELAPNVHVVRGDFDENATFPDKKVVTIGQYRIGLCHGHQIVPWGDVDSLAALQRKMNVDILVTGHTHQYKLHAQNGKWFVNPGSITGAYGNFTPDVVPSFILMAIQGNKVVAYVYELKGDNVVVSKSEFSK 187
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BLAST of mRNA_F-serratus_M_contig73.18518.1 vs. uniprot
Match: A0A1V9ZFC7_9STRA (Vacuolar protein sorting-associated protein 29 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZFC7_9STRA)

HSP 1 Score: 276 bits (706), Expect = 9.070e-87
Identity = 129/189 (68.25%), Postives = 154/189 (81.48%), Query Frame = 2 
Query:  110 MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKDQYDDLRTLAPNVHVVRGDFEE--STTFPESKVVQIGQFRVGLIHGHQIVPWGDPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALETEAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSK 670
            MA DFGELVLV+GD+HIPHR   IPEKFKKMLVPNKMQHV+CTGNLV K+Q+D+LR LAPNVHVVRGDF+E  STTFP+ KV+ IGQFR+G+ HGHQIVPWGD ++L   QR+L  DILI+GHTH  +++   G+WF+NPGSITGAYS    + +PSFIL+AVQ  K V YVYEL  D V VSKSE++K
Sbjct:    1 MAADFGELVLVVGDLHIPHRALDIPEKFKKMLVPNKMQHVVCTGNLVTKEQFDELRDLAPNVHVVRGDFDEVESTTFPDKKVITIGQFRIGICHGHQIVPWGDVDSLAALQRKLNVDILITGHTHEYKLHTQNGKWFVNPGSITGAYSNFTPDVIPSFILMAVQANKVVAYVYELKNDNVVVSKSEYTK 189
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig73.18518.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZW9_ECTSI4.020e-12594.71Vacuolar protein sorting-associated protein 29 n=2... [more]
A0A7S2BTX2_9STRA2.450e-10175.79Vacuolar protein sorting-associated protein 29 n=1... [more]
A0A7S3HCY7_9STRA9.920e-10076.76Vacuolar protein sorting-associated protein 29 n=1... [more]
A0A7S2S7P2_9STRA1.500e-9975.40Vacuolar protein sorting-associated protein 29 n=1... [more]
A0A7S2FLA0_9STRA4.450e-9874.21Vacuolar protein sorting-associated protein 29 n=1... [more]
A0A7S3NIH3_9STRA5.800e-9672.87Vacuolar protein sorting-associated protein 29 n=1... [more]
A0A835ZKD1_9STRA8.900e-9069.07Vacuolar protein sorting-associated protein 29 n=1... [more]
A0A485KLT9_9STRA2.510e-8968.45Vacuolar protein sorting-associated protein 29 n=3... [more]
A0A067CJI0_SAPPC2.440e-8868.45Vacuolar protein sorting-associated protein 29 n=2... [more]
A0A1V9ZFC7_9STRA9.070e-8768.25Vacuolar protein sorting-associated protein 29 n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig73contigF-serratus_M_contig73:226722..231943 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score373.2
Seed ortholog evalue7.3e-101
Seed eggNOG ortholog2880.D7FZW9
Preferred nameVPS29
KEGG koko:K07095,ko:K18467
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000323,GO:0001881,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005767,GO:0005768,GO:0005770,GO:0005771,GO:0005773,GO:0005794,GO:0005802,GO:0005829,GO:0006605,GO:0006623,GO:0006810,GO:0006886,GO:0006892,GO:0006896,GO:0007034,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0010008,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016197,GO:0016482,GO:0023051,GO:0030139,GO:0030904,GO:0030906,GO:0031090,GO:0031410,GO:0031902,GO:0031982,GO:0031984,GO:0032009,GO:0032010,GO:0032588,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042147,GO:0042886,GO:0043112,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044260,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045335,GO:0046872,GO:0046907,GO:0046914,GO:0048193,GO:0050789,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0065007,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072665,GO:0072666,GO:0097708,GO:0098588,GO:0098791,GO:0098796,GO:0098805,GO:0098876,GO:1990126
EggNOG free text desc.retrograde transport, endosome to Golgi
EggNOG OGsCOG0622@1,KOG3325@2759
Ec32 ortholog descriptionsimilar to Vacuolar protein sorting 29 (Vesicle protein sorting 29)
Ec32 orthologEc-22_003790.1
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons3
Model size1737
Cds size591
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig73.18518.1prot_F-serratus_M_contig73.18518.1Fucus serratus malepolypeptideF-serratus_M_contig73 229885..230906 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932217.8149016-UTR-F-serratus_M_contig73:226721..2267541622932217.8149016-UTR-F-serratus_M_contig73:226721..226754Fucus serratus maleUTRF-serratus_M_contig73 226722..226754 +
1690964203.5433857-UTR-F-serratus_M_contig73:226721..2267541690964203.5433857-UTR-F-serratus_M_contig73:226721..226754Fucus serratus maleUTRF-serratus_M_contig73 226722..226754 +
1622932217.8446817-UTR-F-serratus_M_contig73:229808..2298841622932217.8446817-UTR-F-serratus_M_contig73:229808..229884Fucus serratus maleUTRF-serratus_M_contig73 229809..229884 +
1690964203.559832-UTR-F-serratus_M_contig73:229808..2298841690964203.559832-UTR-F-serratus_M_contig73:229808..229884Fucus serratus maleUTRF-serratus_M_contig73 229809..229884 +
1622932217.9052107-UTR-F-serratus_M_contig73:230906..2319431622932217.9052107-UTR-F-serratus_M_contig73:230906..231943Fucus serratus maleUTRF-serratus_M_contig73 230907..231943 +
1690964203.5947788-UTR-F-serratus_M_contig73:230906..2319431690964203.5947788-UTR-F-serratus_M_contig73:230906..231943Fucus serratus maleUTRF-serratus_M_contig73 230907..231943 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932217.865813-CDS-F-serratus_M_contig73:229884..2300541622932217.865813-CDS-F-serratus_M_contig73:229884..230054Fucus serratus maleCDSF-serratus_M_contig73 229885..230054 +
1690964203.57107-CDS-F-serratus_M_contig73:229884..2300541690964203.57107-CDS-F-serratus_M_contig73:229884..230054Fucus serratus maleCDSF-serratus_M_contig73 229885..230054 +
1622932217.8869314-CDS-F-serratus_M_contig73:230485..2309061622932217.8869314-CDS-F-serratus_M_contig73:230485..230906Fucus serratus maleCDSF-serratus_M_contig73 230486..230906 +
1690964203.5822833-CDS-F-serratus_M_contig73:230485..2309061690964203.5822833-CDS-F-serratus_M_contig73:230485..230906Fucus serratus maleCDSF-serratus_M_contig73 230486..230906 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig73.18518.1

>prot_F-serratus_M_contig73.18518.1 ID=prot_F-serratus_M_contig73.18518.1|Name=mRNA_F-serratus_M_contig73.18518.1|organism=Fucus serratus male|type=polypeptide|length=197bp
MAGDFGELVLVLGDMHIPHREAAIPEKFKKMLVPNKMQHVLCTGNLVGKD
QYDDLRTLAPNVHVVRGDFEESTTFPESKVVQIGQFRVGLIHGHQIVPWG
DPNALTMAQRQLGADILISGHTHRNQVNEFGGRWFINPGSITGAYSALET
EAVPSFILLAVQGGKCVTYVYELHGDQVEVSKSEFSKAAPTEHKLR*
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mRNA from alignment at F-serratus_M_contig73:226722..231943+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig73.18518.1 ID=mRNA_F-serratus_M_contig73.18518.1|Name=mRNA_F-serratus_M_contig73.18518.1|organism=Fucus serratus male|type=mRNA|length=5222bp|location=Sequence derived from alignment at F-serratus_M_contig73:226722..231943+ (Fucus serratus male)
GGAAGCCTGGAGCGTCGCAGTGATCACCATAGAGTGAGTGAACATGGTGC
TAAGCTTCCTTCTTTAGCTTGAGTTGCTGTTCTGCATGTTGTCCCGACAG
TCAATACGCACGGAATTACTACTGACAGAGCTTCTTCAAACATCTTACTC
CGATTCCATACTGATGTACTTCGGAATCCTTCGTTTCTTCCTTTTCTGCC
GATGAGGCCTTTGGTTTCGAACCCCATTGACAGCAATTTGGCCCACCCCG
AATGTGGTCCTAGAGGATCTGCGCATCTCCCCTCCAAAAAGGTACTGCCA
TTTTCTACCGCTGCGTGTATTCTTGACTTCTCGTCAATACATTGTTCAAT
CACTCTTACAGTACAAGTGCCACATATATACTTATACTGTATGTATGGAT
GGCCACGCATATATTATAGTTGCAAGAGTAAGGATCAACCGTTGCCAATT
CTGCTCGTGAATTTGGTCTTGCGAGACTGGTTCGGCAGTCCCGTCCCGCG
TCAGCCTGCCCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTACGGG
ATTATTCCCGAGTTCCGCGGCGGCGTCCATTTATTCATTTAAACCGCCAT
ACGCCATCGGGTAAGTCCCGAATTTAATAGGTCACGCAATTGCGTGTCGA
TGGCGTTCACTGCCGAGAGTCCGCCGGCACAGTGCCAGTAAACCTCAAGG
TAGTTCCAAACGGGTGCTGCCTTGGGAGGCCATTCTCATGGACCAATTAA
TAAGTACCTATCTTTTCCACATCCACTACTGGTATGAAGTGGGCATGTTG
AAAGTACCTTTATACCAATAGTGGATGTGGGAAAAGAGATACGCACATTA
ATTGGTCATAGTCCATGGTGACACCTGCAAAAAGGCAGCACCCGTTTCCG
TTACTAGAACTACCTTGAGGACAACTGGCCCTGTACCGGCGGAATCTCGG
AACTGAATGTCATCGGTACGCAATTGCGTCACCTGATAAACTCGGGACTA
GCCCGATAGCGGATGGCGGTATAAATAAATGAACGCCGCCGCGGAAATCG
GGAGGAATCCCGCGAGAAAGCACCAGATTCAGCCGGAGTGTGGAGAATGA
GCAGGCTGACGCGGGACGGGATGGTTGAACCCGTCTCGCGAGACCAGATT
ATCAGGCGCGAACGGGGACAAGGAAATGCTCATTTTCCCTGTTCAGCTGA
CTGCAAGCAGGATTGGCAACCTTACCCGGTTGGTCCATACTCTGCTATAA
ATGATGATCATGCTTACATACACACGCGGGACGGGACTACCGAAACCGTC
TCGCGAGACCAAATTCTCAGGCACGAACGCGGACAGGGGAATATTATTTT
TCCCTGTTCAGCTGACCACAAGCAGGGTTGGTAACCTTACTAGGTTGATC
CAAACTCTTGCTATATGTGTGACCATACACACTGTACCATTTATACTTCT
GTTGTGTACTCGTAAGAGTAGTTTTAGAGATTTCGCCCAGGGAAACTTTT
GGCTTCCACCGGTTGGGACGCGCTGTGCAACACGGTCTGAACGCATCTAA
ACCTTGTGAGCATCCCCCAGACAGGGGGGGGGGGCTGCGGTGTGATATTA
GCCTCCTTACCCCCTCCTCAAAATAAATCGACCCCACCAGAGTCATTACA
ATCAAGTAGACGACGTCCGCCGAGGCTACTGGCACGCGCGGGTATCCTCT
CTTTTGTGTCCATGGTTGAATCTTGAATGCTACCGATCGCTCGCACGATA
CTGTAACAGCCCTCTACGTCTAGCTCTCTCAACAGTCTTAATCGTACAGA
CAGTACAGTATGCTATTAAATAGTAGCTACCAGGGTATAACGGTAAGGCG
TGCTCGCCAGTTCTTTCTGCGAAAGTCACAAGTACAAAATACGTGTCGGC
AAGAAGGTGGTATAGTCGTAAGCCTCTTCACAATGCAAGTACTGGTGCCA
TGTACCGTGCCAGCAGCCCTGCGTGTATGATGCGAACTAAAACGCATGAG
TTTTAAGAATGATCGGAACGCAACTAAACCTTCTGATCATCCACGCAATC
AGGGAAACATTGTCAAAGCGTTTAGGTGGGAACATGAGCTGTAAGGATCA
AAACTCGTCATGGGATTTAATTGGGTTCCCCAATGGTATTATAGTAGCAT
AGGGTCAACAATATAGCTGTTGGTCATCACGTTAAGCAGAGTATGGATCA
ACCGGATGAGGGTTGCCAATTCTGCTCATGGTCAGTTGAACAGGGTAACA
TATTTTTCCGTTCCCGTTCGCGCCTGAGAAGTTGGTAACGCAAGTCGGTT
CGGCTATCCCGTCTCGCGTCAGCCTGCTCATTCTCCACACCTAGGCTGAA
TCTGGTGCTTGCGTGCGCCCTGCTCTCCTCCTTCCCGCTTTCCGCGACGG
TGTTCCGTCTACTGTACACCATCAACCGCCATGGGGTCATTCCCGAGTTT
ACCAGGTCACGAAATTGTGTACCGATAGCGTTTACCGCGGGAGTCCGCCG
GCACAGGCCCAGTTGTCCTCAAGGTAGCTAGAGTAACGGGTGCTGCCCGT
TTAGGTAACCCCTTCGACAGATACATGGGCGCCCCTCGTTTCCCAGACCG
GGTTGGCAGAAGGTGGTACTGTGCTCATGAACATATTCGTTACTCGCCCC
GGTCTGTTTTTTTATTCAAGACCCGGCGAAGAAATTGCACCCGGTAAAGC
GCACAAGCTACGGTGCACGGTGTTTACAAGACTATGTCGACCGTTGCAGG
GCTCAAGAACAAACCCCCGCCTGGTTCAAGTTTGGTACATACCAAACAGC
TCTACGCTCAAGGCGAAATGATCTCAGCCTTCAATCTCTCCCCCCCCCCC
CCCCCCTCTTGGCATCAATAAGTACGTCGTAACCTGAGTACCGAAACAGT
TTCTCTGATTATACACGGTTTACGGGTTGCATTAGCGGCGTCGGTCACAA
TAAACTCTCGAGCGATATCGGTATGCACACGCGAAGTCGAACTGGTGTGT
GTGTGTGTGTGTGTGTGTGTGTCTACAGGAGTTGCGAAAATAAAATGTTT
CTTGCTTGTCGTTTCATCGTGTATTCTGTCACAGCAGATCGAGTGATCAG
TTTGCGACCGTTTCAAACCGCCGACAGTCAAGAGAGCGCGAACCCGCCCC
TTGACGTTGCGGAATGGCGGGCGACTTTGGCGAGTTGGTGCTGGTCCTCG
GGGACATGCACATCCCGCACCGGGAAGCGGCGATCCCGGAGAAGTTCAAA
AAGATGCTGGTGCCCAACAAGATGCAGCACGTCTTGTGCACGGGCAACCT
GGTGGGGAAAGACCAGTACGACGACCTTCGAACGTGAGCGGGAATCGATG
GGGAAAATAACGGGGATGGGAACGCTTTGTTGGGAACCGCTGACCGTCTG
AATAGCTGTGCTCTCATCGGCGCGATGCTGTCGAGGCCTGCAAGGCGATC
TTGCGCAATGGATTTCTACGATGTAGTTGCCATTTTTTTACCGTATGGTG
TCCGTATCGATTCATTTCACGGAAGAGGGGTTCGGGGGATTACAAATATG
CCCCCGCGTTCATGAAAAACAAATCCTTTAAAAAAAAAAGGCTTACCGAA
TAAAATGGGAGGTAGGTTGCGCGATCCCCGGGAGGGTAGTTTGATACCGT
CTCCTTGAACCCGGGGTATGCCAGATATTCAGCGTTTCCTTCCTCTTCCG
TTGATCAAAATGACCTATCGGCCGTGGGCTCGTCCGTTCTCCCTTCTTCT
CTACTGTCCCAAAGATTGGCCCCGAACGTGCACGTGGTTCGTGGAGATTT
CGAAGAATCCACGACATTTCCGGAATCGAAGGTCGTCCAGATCGGGCAGT
TCCGGGTGGGGCTCATCCACGGCCACCAGATCGTGCCCTGGGGGGACCCA
AACGCCTTGACAATGGCGCAGAGACAGCTGGGCGCCGACATCCTCATTTC
AGGCCACACTCATCGGAATCAGGTGAACGAGTTCGGGGGTCGGTGGTTCA
TCAACCCCGGGTCGATCACAGGGGCGTACTCGGCGTTGGAGACCGAGGCA
GTGCCGAGCTTCATCCTTCTCGCGGTGCAGGGGGGCAAGTGCGTCACCTA
CGTCTACGAGCTGCACGGCGACCAGGTGGAGGTATCCAAGAGCGAGTTCA
GTAAGGCGGCGCCCACAGAACATAAGCTTCGGTGATGCCGCCGTCGGCTA
TGGACAATCAAGCATAGCAGCGGGGAAGTGTGCGCTGGCGTAAGGTAGCG
TGACCGTCTGACGAGAAAATATTCGAGCCCCGCGATCTCGCCGCGCAGGC
ACGTTCGAAGCGAAGCGGCTCTGACTTACAACTGCGCTGCGAGGTAGCGG
GTCGGGAATCCATATCCGAGGAGGGAATCGTTGTGACATGCGCAGGATTG
TCGGATCATGTCGAGCTGGAAGAATTGTCGCGAGTCTGCTAGGTATCAAA
CGGCGGAGCGATGGCAGCAACGATGCTTGCGAGTGTGTTTTGGAGTACAC
GTACTCAGGGGATGATGCCGGAACCACATGATGCAGCTCGTGTTAAGATT
GGGAGGTTCGACACGTGTGTTCTCGTAGAGGTTACAACCAATGGGATGAA
CTACTAGGAAGTATCAAACGAAAGCACACACGGGTGCCGCTGAGCGAGAC
ACCATCGTTTTTCTTGCGATACAGCGCAAATTGTCAAACCCAAACTTTGT
GACACCCAAGGGACGCTAAGGCAAACGGCTTTCTCCGTCAACTCCGTCGG
ACCTCCGTAGATATTCACCAGTTCTCCGATATTCCGTTTCGTTCCTTGTG
CGCTAAGCTCCCGATCGCCGAGTGCTTTATCACGGAGTCTCAAAAACGAC
ACTTTGATTTTGGGGTCAAGGTCGAGGATGAACCTCCAAATGGCGGCATT
CCTCCGCATCAACAGCGTGAACGCTTCGAAACAGAATCAAACATTGTTGC
ACATCCAGTGCAGATCGGACCTTGGAAGGCTGCAGCGCACGGCAAACCAT
TACAACTAAACCGAATTATATATTTCTGTGTGAAGATTTGCTAAGGACTC
TCTCCTCTATCCGCAACCTCTCAGCTCCGCGTGAGTAAGCTCTACCAGTA
CACAGAAAAGCTAAAAAGTTGACTTCGACGTCACCATCGCAAGGTTTTTC
CCCTCTTCTTTTTACATTATCTCACCAAGGCCAGTGTCATCTTAGAAATC
TTACTAAAATACGGACGGTTAC
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Coding sequence (CDS) from alignment at F-serratus_M_contig73:226722..231943+

>mRNA_F-serratus_M_contig73.18518.1 ID=mRNA_F-serratus_M_contig73.18518.1|Name=mRNA_F-serratus_M_contig73.18518.1|organism=Fucus serratus male|type=CDS|length=1182bp|location=Sequence derived from alignment at F-serratus_M_contig73:226722..231943+ (Fucus serratus male)
ATGGCGGGCGACTTTGGCGAGTTGGTGCTGGTCCTCGGGGACATGCACAT
CCCGCACCGGGAAGCGGCGATCCCGGAGAAGTTCAAAAAGATGCTGGTGC
CCAACAAGATGCAGCACGTCTTGTGCACGGGCAACCTGGTGGGGAAAGAC
CAGTACGACGACCTTCGAACATGGCGGGCGACTTTGGCGAGTTGGTGCTG
GTCCTCGGGGACATGCACATCCCGCACCGGGAAGCGGCGATCCCGGAGAA
GTTCAAAAAGATGCTGGTGCCCAACAAGATGCAGCACGTCTTGTGCACGG
GCAACCTGGTGGGGAAAGACCAGTACGACGACCTTCGAACATTGGCCCCG
AACGTGCACGTGGTTCGTGGAGATTTCGAAGAATCCACGACATTTCCGGA
ATCGAAGGTCGTCCAGATCGGGCAGTTCCGGGTGGGGCTCATCCACGGCC
ACCAGATCGTGCCCTGGGGGGACCCAAACGCCTTGACAATGGCGCAGAGA
CAGCTGGGCGCCGACATCCTCATTTCAGGCCACACTCATCGGAATCAGGT
GAACGAGTTCGGGGGTCGGTGGTTCATCAACCCCGGGTCGATCACAGGGG
CGTACTCGGCGTTGGAGACCGAGGCAGTGCCGAGCTTCATCCTTCTCGCG
GTGCAGGGGGGCAAGTGCGTCACCTACGTCTACGAGCTGCACGGCGACCA
GGTGGAGGTATCCAAGAGCGAGTTCAGTAAGGCGGCGCCCACAGAACATA
AGCTTCGGTGAATTGGCCCCGAACGTGCACGTGGTTCGTGGAGATTTCGA
AGAATCCACGACATTTCCGGAATCGAAGGTCGTCCAGATCGGGCAGTTCC
GGGTGGGGCTCATCCACGGCCACCAGATCGTGCCCTGGGGGGACCCAAAC
GCCTTGACAATGGCGCAGAGACAGCTGGGCGCCGACATCCTCATTTCAGG
CCACACTCATCGGAATCAGGTGAACGAGTTCGGGGGTCGGTGGTTCATCA
ACCCCGGGTCGATCACAGGGGCGTACTCGGCGTTGGAGACCGAGGCAGTG
CCGAGCTTCATCCTTCTCGCGGTGCAGGGGGGCAAGTGCGTCACCTACGT
CTACGAGCTGCACGGCGACCAGGTGGAGGTATCCAAGAGCGAGTTCAGTA
AGGCGGCGCCCACAGAACATAAGCTTCGGTGA
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