prot_F-serratus_M_contig7251.18486.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig7251.18486.1
Unique Nameprot_F-serratus_M_contig7251.18486.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length133
Homology
BLAST of mRNA_F-serratus_M_contig7251.18486.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 4.050e-37
Identity = 64/128 (50.00%), Postives = 88/128 (68.75%), Query Frame = 0
Query:    1 MGHLNRKSLDLLKKVNSNGVSFEGTVPDCDVCAVGKSRQRAHPKTADQHVQRSFQLVFTDLMGQFTPEALGGYKYVSKISDEHTRWTGVYLLKSKDGALHTFQSFVQSMVIPSGVRVERLRADKGGEF 128
            +GH++ +SLD+L+KV  NGV + G +  CDVCAVG S+Q+ HPK A     R FQLV TDLMG F+P ALGG+ Y+ K  D+H +W  V+L+K K   +   Q F QS++ P  +R+E +RADKGGE+
Sbjct:  273 VGHVHGRSLDILRKVQGNGVEYNGELSACDVCAVGNSKQQNHPKRASYDASRPFQLVTTDLMGPFSPPALGGFLYIKKFVDQHIKWNEVFLMKEKSATVDALQLFNQSVLTPHELRLECVRADKGGEY 400          
BLAST of mRNA_F-serratus_M_contig7251.18486.1 vs. uniprot
Match: A0A6H5KJN3_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJN3_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.330e-33
Identity = 62/128 (48.44%), Postives = 83/128 (64.84%), Query Frame = 0
Query:    1 MGHLNRKSLDLLKKVNSNGVSFEGTVPDCDVCAVGKSRQRAHPKTADQHVQRSFQLVFTDLMGQFTPEALGGYKYVSKISDEHTRWTGVYLLKSKDGALHTFQSFVQSMVIPSGVRVERLRADKGGEF 128
            MGH+N KSLD+L++  ++G+ + G V DC  C +GKS Q+ HPK A   V   FQLVF D +G FTP ALGG+KY +K  D+HT+W  V L+K K  ++   + F +  VIP   R+  LRADKG EF
Sbjct:  580 MGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEF 707          
BLAST of mRNA_F-serratus_M_contig7251.18486.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.360e-33
Identity = 62/128 (48.44%), Postives = 83/128 (64.84%), Query Frame = 0
Query:    1 MGHLNRKSLDLLKKVNSNGVSFEGTVPDCDVCAVGKSRQRAHPKTADQHVQRSFQLVFTDLMGQFTPEALGGYKYVSKISDEHTRWTGVYLLKSKDGALHTFQSFVQSMVIPSGVRVERLRADKGGEF 128
            MGH+N KSLD+L++  ++G+ + G V DC  C +GKS Q+ HPK A   V   FQLVF D +G FTP ALGG+KY +K  D+HT+W  V L+K K  ++   + F +  VIP   R+  LRADKG EF
Sbjct:  702 MGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEF 829          
BLAST of mRNA_F-serratus_M_contig7251.18486.1 vs. uniprot
Match: A0A6H5J842_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J842_9PHAE)

HSP 1 Score: 133 bits (335), Expect = 1.360e-33
Identity = 62/128 (48.44%), Postives = 83/128 (64.84%), Query Frame = 0
Query:    1 MGHLNRKSLDLLKKVNSNGVSFEGTVPDCDVCAVGKSRQRAHPKTADQHVQRSFQLVFTDLMGQFTPEALGGYKYVSKISDEHTRWTGVYLLKSKDGALHTFQSFVQSMVIPSGVRVERLRADKGGEF 128
            MGH+N KSLD+L++  ++G+ + G V DC  C +GKS Q+ HPK A   V   FQLVF D +G FTP ALGG+KY +K  D+HT+W  V L+K K  ++   + F +  VIP   R+  LRADKG EF
Sbjct:  580 MGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTLGPFTPTALGGFKYATKFVDQHTKWKEVVLMKDKTCSIDALELFNKGTVIPRSARIHVLRADKGTEF 707          
BLAST of mRNA_F-serratus_M_contig7251.18486.1 vs. uniprot
Match: A0A6H5JBV6_9PHAE (Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBV6_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.170e-32
Identity = 62/133 (46.62%), Postives = 84/133 (63.16%), Query Frame = 0
Query:    1 MGHLNRKSLDLLKKVNSNGVSFEGTVPDCDVCAVGKSRQRAHPKTADQHVQRSFQLVFTDLMGQFTPEALGGYKYVSKISDEHTRWTGVYLLKSKDGALHTFQSFVQSMVIPSGVRVERLRADKGGEFIGNDF 133
            MGH+N KSLD+L+K  +NGV     V DC  CA+GKS Q+ HPK A   V+R FQLVF D +G FTP ALGG+KY +K  D+ T+W  + L+K K  ++ +   F +  V+P+G  +  LR D G EF   +F
Sbjct:  533 MGHINSKSLDILRKAPNNGVDHTEDVKDCGPCALGKSTQQPHPKEATYDVKRPFQLVFVDTLGPFTPTALGGFKYATKFVDQQTKWAEIGLMKDKTCSVDSLALFNKGTVVPTGEGIHCLRGDHGTEFTSAEF 665          
BLAST of mRNA_F-serratus_M_contig7251.18486.1 vs. uniprot
Match: A0A6H5KXM1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM1_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 8.730e-31
Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 0
Query:    1 MGHLNRKSLDLLKKVNSNGVSFEGTVPDCDVCAVGKSRQRAHPKTADQHVQRSFQLVFTDLMGQFTPEALGGYKYVSKISDEHTRWTGVYLLKSKDGALHTFQSFVQSMVIPSGVRVERLRADKGGEFIGNDF 133
            MGH+N KSLD+L+K   NGV + G V DC VC +GKS Q+ HPK     V R FQ V  D +G FTP ALGG+KY +K  D+ T+W  + L+K +  ++ +   F +  V+P+G R+  LR D G EF   +F
Sbjct:  293 MGHINGKSLDVLRKEPVNGVDYTGNVNDCCVCPLGKSAQQPHPKQVTYGVLRPFQHVSVDTLGPFTPTALGGFKYATKFVDQQTKWAEIVLMKDQACSVDSLALFKKGTVVPTGERIHCLRGDPGTEFTSAEF 425          
BLAST of mRNA_F-serratus_M_contig7251.18486.1 vs. uniprot
Match: A0A6H5JYB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYB5_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.470e-29
Identity = 59/129 (45.74%), Postives = 79/129 (61.24%), Query Frame = 0
Query:    1 MGHLNRKSLDLLKKVNSNGVSFEGTVPDCDVCAVGKSRQRAHPKTADQHVQRSFQLVFTDLMGQFTPEALGGYKYVSKISDEHTRWTGVYLLKSKDG-ALHTFQSFVQSMVIPSGVRVERLRADKGGEF 128
            MGH+N KSLD+L++  ++G+ + G V DC  C +GKS Q+ HPK A   V   FQLVF D  G FT   LGG+KY +K  D+HT+W  V L+K K   ++   + F +  VIP   R+  LRA KG EF
Sbjct:  485 MGHINNKSLDVLRQQAASGIDYRGDVQDCSACPLGKSSQQPHPKHAVYGVSTPFQLVFVDTFGPFTSTTLGGFKYATKFVDQHTKWKEVVLMKDKTSCSIDGLELFNKGTVIPRSARIHVLRAGKGAEF 613          
BLAST of mRNA_F-serratus_M_contig7251.18486.1 vs. uniprot
Match: A0A6H5JYD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYD3_9PHAE)

HSP 1 Score: 115 bits (288), Expect = 2.790e-27
Identity = 53/131 (40.46%), Postives = 81/131 (61.83%), Query Frame = 0
Query:    3 HLNRKSLDLLKKVNSNGVSFEGTVPDCDVCAVGKSRQRAHPKTADQHVQRSFQLVFTDLMGQFTPEALGGYKYVSKISDEHTRWTGVYLLKSKDGALHTFQSFVQSMVIPSGVRVERLRADKGGEFIGNDF 133
            HLN +S++LL+K   NGV F  ++  CD+CA+ KSRQ AHP+  ++      QLV+TD MG+ TP A GG+ YVSK +D ++    +YLLK+    +    ++   +  P G R+E +R + GGE + N+F
Sbjct:  317 HLNFRSMELLRKKEDNGVDFSDSMTPCDICAISKSRQLAHPEKTNRETTAPMQLVYTDNMGKTTPLAKGGFGYVSKFTDAYSWMKEIYLLKAISETVRALHAYNMQVAAPLGRRIEIIRCESGGENVANEF 447          
BLAST of mRNA_F-serratus_M_contig7251.18486.1 vs. uniprot
Match: A0A6H5JT61_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT61_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 4.510e-26
Identity = 52/133 (39.10%), Postives = 79/133 (59.40%), Query Frame = 0
Query:    1 MGHLNRKSLDLLKKVNSNGVSFEGTVPDCDVCAVGKSRQRAHPKTADQHVQRSFQLVFTDLMGQFTPEALGGYKYVSKISDEHTRWTGVYLLKSKDGALHTFQSFVQSMVIPSGVRVERLRADKGGEFIGNDF 133
            +GHLN +S+ LL+K   N V F  ++  CD+CA+ KS Q AHPK   +       LV+TD+MG+ TP A GG+ YVS  +D ++R   +YLLK+K   +    ++   +  P G  +E +R D+G E + N+F
Sbjct:  113 LGHLNFRSMKLLRKKEENEVDFSDSMTPCDICAISKSTQLAHPKKTSRETTAPMLLVYTDIMGKTTPLAKGGFGYVSMFNDAYSRIKEIYLLKAKSETVRALHAYNMQVAAPLGRGIEIIRCDRGRENVANEF 245          
BLAST of mRNA_F-serratus_M_contig7251.18486.1 vs. uniprot
Match: A0A6H5KZ34_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ34_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 9.360e-25
Identity = 50/136 (36.76%), Postives = 75/136 (55.15%), Query Frame = 0
Query:    1 MGHLNRKSLDLLKKVNSNGVSFEGTVPDCDVCAVGKSRQRAHPKTADQHVQRSFQLVFTDLMGQFTPEAL---GGYKYVSKISDEHTRWTGVYLLKSKDGALHTFQSFVQSMVIPSGVRVERLRADKGGEFIGNDF 133
            +GHLN +SLD+L+K    GV +  ++  C VC + K +Q  HPK + + + R  QLV  D MG   P A    G + Y  KI+D++T+   VYLL+ K        ++   +    G R+E +R DKGGE  G++F
Sbjct:   49 LGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEF 184          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7251.18486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K1J1_9PHAE4.050e-3750.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJN3_9PHAE1.330e-3348.44Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KJH6_9PHAE1.360e-3348.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J842_9PHAE1.360e-3348.44Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JBV6_9PHAE1.170e-3246.62Gag-Pol-p199 n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5KXM1_9PHAE8.730e-3145.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYB5_9PHAE1.470e-2945.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYD3_9PHAE2.790e-2740.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT61_9PHAE4.510e-2639.10Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KZ34_9PHAE9.360e-2536.76Integrase catalytic domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 43..133
e-value: 1.0E-8
score: 36.6
NoneNo IPR availablePANTHERPTHR11439:SF250coord: 2..131
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..131
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 50..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7251contigF-serratus_M_contig7251:14689..15087 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7251.18486.1mRNA_F-serratus_M_contig7251.18486.1Fucus serratus malemRNAF-serratus_M_contig7251 14674..15087 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig7251.18486.1 ID=prot_F-serratus_M_contig7251.18486.1|Name=mRNA_F-serratus_M_contig7251.18486.1|organism=Fucus serratus male|type=polypeptide|length=133bp
MGHLNRKSLDLLKKVNSNGVSFEGTVPDCDVCAVGKSRQRAHPKTADQHV
QRSFQLVFTDLMGQFTPEALGGYKYVSKISDEHTRWTGVYLLKSKDGALH
TFQSFVQSMVIPSGVRVERLRADKGGEFIGNDF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf