mRNA_F-serratus_M_contig722.18469.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig722.18469.1 vs. uniprot
Match: A0A6H5JRP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRP2_9PHAE) HSP 1 Score: 243 bits (619), Expect = 2.690e-78 Identity = 117/129 (90.70%), Postives = 125/129 (96.90%), Query Frame = 1
Query: 28 ETLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLTSIVESKAERARFGRFYYRFPLGESGLDVYNRATSFIATMFRDFANQNIAREDLNVIIVTHGLTLRLLVMRWFQYSIADFEQTINPANGAFVVM 414
+TLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNL +IV SKAERARFGRFYYRFP GESGLDVYNRATSFIATMFRDFAN++IAR+DLNVIIVTHGLTLRLLVMRWFQYSIADFE+T+NP NG+FVVM
Sbjct: 106 QTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVM 234
BLAST of mRNA_F-serratus_M_contig722.18469.1 vs. uniprot
Match: D7FZ54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ54_ECTSI) HSP 1 Score: 243 bits (619), Expect = 5.950e-78 Identity = 117/129 (90.70%), Postives = 125/129 (96.90%), Query Frame = 1
Query: 28 ETLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLTSIVESKAERARFGRFYYRFPLGESGLDVYNRATSFIATMFRDFANQNIAREDLNVIIVTHGLTLRLLVMRWFQYSIADFEQTINPANGAFVVM 414
+TLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNL +IV SKAERARFGRFYYRFP GESGLDVYNRATSFIATMFRDFAN++IAR+DLNVIIVTHGLTLRLLVMRWFQYSIADFE+T+NP NG+FVVM
Sbjct: 184 QTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVM 312
BLAST of mRNA_F-serratus_M_contig722.18469.1 vs. uniprot
Match: A0A836CA23_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA23_9STRA) HSP 1 Score: 231 bits (588), Expect = 8.490e-73 Identity = 111/129 (86.05%), Postives = 119/129 (92.25%), Query Frame = 1
Query: 28 ETLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLTSIVESKAERARFGRFYYRFPLGESGLDVYNRATSFIATMFRDFANQNIAREDLNVIIVTHGLTLRLLVMRWFQYSIADFEQTINPANGAFVVM 414
+TLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNL +I +SK ERARFGRFYYRFP GESGLDVYNRATSFIATMFRDF+N+ IAR+DLNV+IVTHGLTLRL+VMRWFQYSIADFE T NP NG VVM
Sbjct: 158 QTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFSNEQIARDDLNVVIVTHGLTLRLMVMRWFQYSIADFENTYNPPNGGHVVM 286
BLAST of mRNA_F-serratus_M_contig722.18469.1 vs. uniprot
Match: A0A7S1XZK9_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZK9_9STRA) HSP 1 Score: 201 bits (512), Expect = 9.480e-61 Identity = 96/125 (76.80%), Postives = 112/125 (89.60%), Query Frame = 1
Query: 40 GMVEAFDTNYIVGVREEPRLTEQQFGNFQNLTSIVESKAERARFGRFYYRFPLGESGLDVYNRATSFIATMFRDFANQNIAREDLNVIIVTHGLTLRLLVMRWFQYSIADFEQTINPANGAFVVM 414
GMV A+DTN IVGVREEPRLTEQQFGNFQN+T++ ES+ +R RFGRFY+RFP GESGLDVYNR TSFIAT+FRDF+N++IAREDL+VIIVTHGLTLRL +MR+F Y+I DFE + NP NGAFVVM
Sbjct: 180 GMVGAWDTNEIVGVREEPRLTEQQFGNFQNVTNVKESREQRTRFGRFYFRFPEGESGLDVYNRVTSFIATLFRDFSNKDIAREDLDVIIVTHGLTLRLFLMRFFHYTIHDFENSYNPNNGAFVVM 304
BLAST of mRNA_F-serratus_M_contig722.18469.1 vs. uniprot
Match: A0A7S3XT41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT41_HETAK) HSP 1 Score: 192 bits (487), Expect = 1.400e-59 Identity = 91/129 (70.54%), Postives = 107/129 (82.95%), Query Frame = 1
Query: 28 ETLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLTSIVESKAERARFGRFYYRFPLGESGLDVYNRATSFIATMFRDFANQNIAREDLNVIIVTHGLTLRLLVMRWFQYSIADFEQTINPANGAFVVM 414
+TLAGM+ A +TN I+G REEPRLTEQQFGNFQN+ + +SK ERARFGRFYYRFP GESGLDVYNR+TSFIATM RD AN +AR L+ +IVTHGLTLRL +MRWFQYS+ DFE++ NP NG V+M
Sbjct: 16 QTLAGMMGALETNDIIGAREEPRLTEQQFGNFQNVLTTRQSKDERARFGRFYYRFPQGESGLDVYNRSTSFIATMHRDMANPALARPGLHSVIVTHGLTLRLFLMRWFQYSVEDFEESHNPPNGGVVIM 144
BLAST of mRNA_F-serratus_M_contig722.18469.1 vs. uniprot
Match: A0A4D9D0Z6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0Z6_9STRA) HSP 1 Score: 180 bits (457), Expect = 2.740e-52 Identity = 84/129 (65.12%), Postives = 105/129 (81.40%), Query Frame = 1
Query: 28 ETLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLTSIVESKAERARFGRFYYRFPLGESGLDVYNRATSFIATMFRDFANQNIAREDLNVIIVTHGLTLRLLVMRWFQYSIADFEQTINPANGAFVVM 414
+TL+ ++E+F+ N VGVREEPR+TEQQFGNFQ + ++K ER FGRFY+RFP GESGLDVY R TSFI+TMFRDFA+ +I R DLN++IVTHGLTLRLL+MRWF+ ++ FE T NP NG+FVVM
Sbjct: 241 QTLSNILESFEDNLKVGVREEPRITEQQFGNFQCQQLMQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVDTFESTTNPPNGSFVVM 369
BLAST of mRNA_F-serratus_M_contig722.18469.1 vs. uniprot
Match: A0A7S2SR22_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR22_9STRA) HSP 1 Score: 174 bits (440), Expect = 1.570e-51 Identity = 86/134 (64.18%), Postives = 102/134 (76.12%), Query Frame = 1
Query: 28 ETLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLTSIVESKAERARFGRFYYRFPLGESGLDVYNRATSFIATMFRDFANQNIARE-----DLNVIIVTHGLTLRLLVMRWFQYSIADFEQTINPANGAFVVM 414
ETL MV F+ + IVGVREEPRLTEQQFGNFQNL I K ER+ +GRFYYRFP GESG DVY R ++F+ ++RD AN + E DLNV+IV+HGLTLRLL+MRWFQY+I+DFEQ+ NP N AFVVM
Sbjct: 107 ETLQSMVTEFEQSDIVGVREEPRLTEQQFGNFQNLDEIQICKVERSSYGRFYYRFPQGESGFDVYTRVSTFLPDLYRDAANAELFGEGQTARDLNVVIVSHGLTLRLLLMRWFQYTISDFEQSHNPPNAAFVVM 240
BLAST of mRNA_F-serratus_M_contig722.18469.1 vs. uniprot
Match: A0A7S0SR39_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR39_9STRA) HSP 1 Score: 166 bits (419), Expect = 5.150e-48 Identity = 78/132 (59.09%), Postives = 99/132 (75.00%), Query Frame = 1
Query: 28 ETLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLTSIVESKAERARFGRFYYRFPLGESGLDVYNRATSFIATMFRDFANQNIAR---EDLNVIIVTHGLTLRLLVMRWFQYSIADFEQTINPANGAFVVM 414
+T A M++ N ++ VREEPRLTEQQFGNFQ ++ K ER +FGRFYYRFP GESGLDVY+R +SFI T+FR++A + R ED N+IIVTHGLTLRL +MRWFQ+S+++FE T NP NG +VM
Sbjct: 112 QTFALMIKELSNNNVITVREEPRLTEQQFGNFQKAEDMIRYKKERGQFGRFYYRFPDGESGLDVYSRVSSFIGTLFREWAKEQSTRSNHEDNNIIIVTHGLTLRLFLMRWFQFSVSEFENTRNPNNGDIIVM 243
BLAST of mRNA_F-serratus_M_contig722.18469.1 vs. uniprot
Match: A0A6U6F2X5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6F2X5_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.930e-45 Identity = 72/132 (54.55%), Postives = 99/132 (75.00%), Query Frame = 1
Query: 28 ETLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLTSIVESKAERARFGRFYYRFPLGESGLDVYNRATSFIATMFRDFANQNIAREDL---NVIIVTHGLTLRLLVMRWFQYSIADFEQTINPANGAFVVM 414
+TL G+++ D + ++G+REEPR++EQQFGN+Q ++ +K ER FGRFYYRFP GESG DVYNR +SFI+T+FRD DL NV IVTHGL+LRL++MRWFQY++ +FE++ NP NG+ VV+
Sbjct: 63 QTLRGILDEMDLDCVIGLREEPRISEQQFGNYQCFETVKVAKVERGDFGRFYYRFPNGESGFDVYNRVSSFISTIFRDVQQLRAEGHDLDRMNVCIVTHGLSLRLILMRWFQYTVHEFEESFNPDNGSVVVL 194
BLAST of mRNA_F-serratus_M_contig722.18469.1 vs. uniprot
Match: A0A7R9VGE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VGE0_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.020e-45 Identity = 69/132 (52.27%), Postives = 98/132 (74.24%), Query Frame = 1
Query: 28 ETLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLTSIVESKAERARFGRFYYRFPLGESGLDVYNRATSFIATMFRDFANQNIARED---LNVIIVTHGLTLRLLVMRWFQYSIADFEQTINPANGAFVVM 414
+TL G+++ + + ++G+REEPR++EQQFGN+Q + +KAER FGRFYYRFP GESG DVYNR +SFI+T+FRD D L++ +VTHGL LRL++MRWFQY++ +FE++ NP NG+ VV+
Sbjct: 11 QTLRGILDEMNLDCVIGLREEPRISEQQFGNYQCFEDVKMAKAERGDFGRFYYRFPNGESGFDVYNRVSSFISTIFRDIEQLRAEGHDTDRLHICVVTHGLALRLILMRWFQYTVHEFEESFNPDNGSVVVL 142 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig722.18469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig722.18469.1 >prot_F-serratus_M_contig722.18469.1 ID=prot_F-serratus_M_contig722.18469.1|Name=mRNA_F-serratus_M_contig722.18469.1|organism=Fucus serratus male|type=polypeptide|length=138bp MIVVCGCSLETLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLTSIVESback to top mRNA from alignment at F-serratus_M_contig722:69607..70435+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig722.18469.1 ID=mRNA_F-serratus_M_contig722.18469.1|Name=mRNA_F-serratus_M_contig722.18469.1|organism=Fucus serratus male|type=mRNA|length=829bp|location=Sequence derived from alignment at F-serratus_M_contig722:69607..70435+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig722:69607..70435+ >mRNA_F-serratus_M_contig722.18469.1 ID=mRNA_F-serratus_M_contig722.18469.1|Name=mRNA_F-serratus_M_contig722.18469.1|organism=Fucus serratus male|type=CDS|length=828bp|location=Sequence derived from alignment at F-serratus_M_contig722:69607..70435+ (Fucus serratus male)back to top |