prot_F-serratus_M_contig722.18468.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig722.18468.1
Unique Nameprot_F-serratus_M_contig722.18468.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length409
Homology
BLAST of mRNA_F-serratus_M_contig722.18468.1 vs. uniprot
Match: A0A6H5JUT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT1_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 1.270e-108
Identity = 202/438 (46.12%), Postives = 260/438 (59.36%), Query Frame = 0
Query:    8 AKKSFPTLAGIAAAGLAGGTGGFLAWKSSKKQENVNTTREEGDDGPTLAKMP--KRTGPMVAVYLDKGSVETLRKEFPGTAPGRLRKVVVQYNPSDEERQEYQPHFGGLATVKLTGEAFSTNRRALVASVALEDSPIKPKSLSCAVDVTPGDTGGGPLGSAALVEQIKNAGAEKEVSWKGVLPQLTAYDREFASEEGGYDRFDEPFTLTGSICRADWMEGTTARCRTHMEGGLPRTDGWTPQACILCNILEGSPCRDVYKRFDDISERIAKLSPPPKESSEENSLGGSSS----------------------------------EGDARVDVEKETVEDGTEKAAADAKESVKVAVSGEDGDGSGHDA-APAGRKEAXXXXXXX------KMRKQELETLETEREGIALEMLVCTDHHAVWVDSNADDGFTGDVMDDD 402
            A K    +AG+AA GL  G  G  AW+S +  E++    ++    P  A  P  +RTGPMVAVYLD  S+E L+ ++PGT PGRLRKVV++Y+PSDE+R  Y+P FG  ATVKLTGEA S NR ALVASV+   + ++P SLSCAVDVTPG+ GGGPLGS  L+EQIK  GA  E SWKG+LP L+A++R+F SEEG Y++ DEP TLTGSICRADW+EG T  CRT   GG  R DGWTPQ C +CN LE SPCRD+YK FD ++ RI +L PP + SS+ +   G+S                                             +   +G+   A    +  + A+SG  G   GH      G KE+  XXXXX      ++R++ELE LE +R  + ++ML C+  H V  DSNADDG   D+  DD
Sbjct:    4 AVKRISPIAGVAAGGLVAGAAGLWAWRSMRDNEDI----DDATTAPAPAPSPPLQRTGPMVAVYLDDSSIEKLQMKYPGTNPGRLRKVVIEYDPSDEQRGLYEPRFGDSATVKLTGEASSENRVALVASVSSAGTSVEPPSLSCAVDVTPGEVGGGPLGSTVLIEQIKRVGAVAEDSWKGLLPALSAHERDFLSEEGSYNKLDEPLTLTGSICRADWVEGMTGVCRTTTAGGGKREDGWTPQPCTICNSLESSPCRDIYKEFDALNTRINELQPPSETSSDGSKSPGTSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVAFEGSAGTAVGGGD--ENALSGRQG---GHSRKGEGGEKESEEXXXXXXXXXEERLRREELEVLEEKRTDVMVKMLKCSQFHHVLEDSNADDGLVPDMSGDD 432          
BLAST of mRNA_F-serratus_M_contig722.18468.1 vs. uniprot
Match: D7FZ55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ55_ECTSI)

HSP 1 Score: 330 bits (845), Expect = 5.530e-106
Identity = 198/443 (44.70%), Postives = 255/443 (57.56%), Query Frame = 0
Query:    8 AKKSFPTLAGIAAAGLAGGTGGFLAWKSSKKQENV----NTTREEGDDGPTLAKMPKRTGPMVAVYLDKGSVETLRKEFPGTAPGRLRKVVVQYNPSDEERQEYQPHFGGLATVKLTGEAFSTNRRALVASVALEDSPIKPKSLSCAVDVTPGDTGGGPLGSAALVEQIKNAGAEKEVSWKGVLPQLTAYDREFASEEGGYDRFDEPFTLTGSICRADWMEGTTARCRTHMEGGLPRTDGWTPQACILCNILEGSPCRDVYKRFDDISERIAKLSPPPKESSEENSLGGSSSEGDARV------------------DVEKETVEDGTEKAAADAKESV--------------KVAVSGEDGDGSGHDAAPAGRKEAXXXXXXX------KMRKQELETLETEREGIALEMLVCTDHHAVWVDSNADDGFTGDVMDDDDDDEKG 408
            A K     AG+AA GL  G  G  AW+S  K++N      TT              +RTGPMVAVYLD  S+E L+ E+PGT PGRLRKVV++Y+PSDE+R  Y+P FGG ATVK+TGEA S NR ALVASV+   + ++P SLSCAVDVTPGD GGGPLGS  L+EQIK  GA  E SWKG+LP L+A++R+F SEEG Y++ DEP TLTGSICRADW+E  T  CRT   GG  R DGWTPQAC +CN LE SPCRD++K+FD +S RI +L P  + SS+ +   G                             E   V  G+++ A  +   +              + A+SG  G  S       G KE+             ++R++ELE LE +R  + +EM  C+  H V  DS ADDG    ++ DD++ E+G
Sbjct:    4 AVKRISPFAGVAAGGLVAGAAGLWAWRS--KRDNAVKGDATTAPXXXXXXXXXXPLQRTGPMVAVYLDDSSIEKLQMEYPGTKPGRLRKVVIEYDPSDEQRGLYEPRFGGSATVKVTGEACSDNRLALVASVSSAGTSVEPPSLSCAVDVTPGDVGGGPLGSTVLIEQIKRVGALAEDSWKGLLPPLSAHERDFPSEEGSYNKLDEPLTLTGSICRADWVEPMTGVCRTTTAGGGKREDGWTPQACSICNTLESSPCRDIHKKFDAVSTRIYELQPTSETSSDGSKPPGXXXXXXXXXXXXXXXXXXXXXXXXXXKQTEATEVVAGSDRGAGRSGTDIASEGSAGPAVGGGDENALSGRHGGHSPSRKGEVGEKESVAGGSGEPETEEERLRREELEVLEDKRMVVMVEMFRCSKFHHVLEDSYADDGLVPGMLGDDEEGEEG 444          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig722.18468.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JUT1_9PHAE1.270e-10846.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ55_ECTSI5.530e-10644.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 342..369
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..408
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 12..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig722contigF-serratus_M_contig722:54196..57555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig722.18468.1mRNA_F-serratus_M_contig722.18468.1Fucus serratus malemRNAF-serratus_M_contig722 54120..57933 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig722.18468.1 ID=prot_F-serratus_M_contig722.18468.1|Name=mRNA_F-serratus_M_contig722.18468.1|organism=Fucus serratus male|type=polypeptide|length=409bp
MSVAQRVAKKSFPTLAGIAAAGLAGGTGGFLAWKSSKKQENVNTTREEGD
DGPTLAKMPKRTGPMVAVYLDKGSVETLRKEFPGTAPGRLRKVVVQYNPS
DEERQEYQPHFGGLATVKLTGEAFSTNRRALVASVALEDSPIKPKSLSCA
VDVTPGDTGGGPLGSAALVEQIKNAGAEKEVSWKGVLPQLTAYDREFASE
EGGYDRFDEPFTLTGSICRADWMEGTTARCRTHMEGGLPRTDGWTPQACI
LCNILEGSPCRDVYKRFDDISERIAKLSPPPKESSEENSLGGSSSEGDAR
VDVEKETVEDGTEKAAADAKESVKVAVSGEDGDGSGHDAAPAGRKEARAE
SEEEKMRKQELETLETEREGIALEMLVCTDHHAVWVDSNADDGFTGDVMD
DDDDDEKG*
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