prot_F-serratus_M_contig72.18423.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig72.18423.1
Unique Nameprot_F-serratus_M_contig72.18423.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length179
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig72.18423.1 vs. uniprot
Match: A0A6H5KYI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI3_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 5.400e-29
Identity = 78/134 (58.21%), Postives = 93/134 (69.40%), Query Frame = 0 
Query:   48 QEGPALERRRFVSGMAFAAATAAVGRATGLMETGVPPAQAASGGEGQLGDLESGPPEPM---KVTEGEPLSSESARIQQKLAAQAKATGRSSSGTLTYSESMAAEGKKQAKMKAEKNDKARRRAAMCEELGRGC 178
            QEGP+  R  F+S    AA T A     G++  G+ P  A +    QLGDL+ G P PM   K+TEGEPLS E+ARIQ+KLAAQAK  G+SSSG +TY ES AAEG+KQ ++K E NDKARRRAAMCE LGRGC
Sbjct:   53 QEGPS-NRGDFLSS---AAGTIAAAAGLGVVTGGLKPGAAVAD---QLGDLDGGAPTPMGGVKLTEGEPLSEEAARIQRKLAAQAKLNGKSSSGQMTYGESRAAEGEKQQRLKDEANDKARRRAAMCENLGRGC 179
[Close]
BLAST of mRNA_F-serratus_M_contig72.18423.1 vs. uniprot
Match: D7FUR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR4_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 1.780e-23
Identity = 53/73 (72.60%), Postives = 63/73 (86.30%), Query Frame = 0 
Query:  106 MKVTEGEPLSSESARIQQKLAAQAKATGRSSSGTLTYSESMAAEGKKQAKMKAEKNDKARRRAAMCEELGRGC 178
            +K+TEGEPLS E+ARIQ+KLAAQAK  G++SSG +TY ES AAEG+KQ ++K E NDKARRRAAMCE LGRGC
Sbjct:    4 VKLTEGEPLSEEAARIQRKLAAQAKLNGKTSSGQMTYGESRAAEGEKQQRLKDEANDKARRRAAMCENLGRGC 76
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig72.18423.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KYI3_9PHAE5.400e-2958.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUR4_ECTSI1.780e-2372.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..178
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..87
score: 7.807

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig72contigF-serratus_M_contig72:799725..820218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig72.18423.1mRNA_F-serratus_M_contig72.18423.1Fucus serratus malemRNAF-serratus_M_contig72 799617..820311 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig72.18423.1 ID=prot_F-serratus_M_contig72.18423.1|Name=mRNA_F-serratus_M_contig72.18423.1|organism=Fucus serratus male|type=polypeptide|length=179bp
MKHSMLSIYAIIYFASRSYAFVALPLTGRSSVHMMRASRSCSAMSLSQEG
PALERRRFVSGMAFAAATAAVGRATGLMETGVPPAQAASGGEGQLGDLES
GPPEPMKVTEGEPLSSESARIQQKLAAQAKATGRSSSGTLTYSESMAAEG
KKQAKMKAEKNDKARRRAAMCEELGRGC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006311TAT_signal