prot_F-serratus_M_contig72.18416.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig72.18416.1
Unique Nameprot_F-serratus_M_contig72.18416.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length222
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig72.18416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13857Ank_5coord: 28..70
e-value: 3.0E-6
score: 27.4
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 123..221
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..103
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 24..104
e-value: 3.2E-9
score: 38.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 29..69
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 30..68
score: 15.22
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 30..62
score: 13.357

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig72contigF-serratus_M_contig72:580733..582980 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig72.18416.1mRNA_F-serratus_M_contig72.18416.1Fucus serratus malemRNAF-serratus_M_contig72 580728..583247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig72.18416.1 ID=prot_F-serratus_M_contig72.18416.1|Name=mRNA_F-serratus_M_contig72.18416.1|organism=Fucus serratus male|type=polypeptide|length=222bp
MKHLLPTSAKGRGRGGGAAMLPGKKFLERTGTSPLHRAAAAGNFYCVRIL
LEAGADETALDRNGHAPLAIVGTLRKSCGDTNFTSLRAREKNKRREEDER
IRRALLKAFLYRSAAWLWPLILSNKEEKPTKKGIGKSSAGFDFSGENGKK
RGDGVGGGATKKLGVFGVFRRSRNDQEGKEKEEGDGGEEGGGRRGNVGIN
LPSCAIFRKIVRYGQKGNKNH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt