mRNA_F-serratus_M_contig719.18388.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig719.18388.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 273 bits (697), Expect = 3.150e-81 Identity = 126/194 (64.95%), Postives = 159/194 (81.96%), Query Frame = 1
Query: 1 DVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACVYETTFYDRLLIATLGPIVLLVLLGCTYVVALWRNRGRDGALATVRRRHLSVALFIMFILYGTVSHTIFETFMCDEMGGGESYLRADYSLDCTTRMHKAYQVWAAFMVIVYPLGIPCVFGLWLAEHRHDLKADPHRHFNPNLRPAADLWEPYKRNRYYYEV 582
DVAG++YPGAY+DFLS++D+VNLD+GFILSFACVY+T FYDRLL+AT+GP+++L LLGCTYVVA RNR + A+ V+RRHLSV LF+MF++Y VS+TIFETF+CD + G SYLRADYSL C T +H AY+V+A V+VYP+GIPC+FG WL ++RH+LK + R LRPAADLWEPYK + YYYEV
Sbjct: 716 DVAGIEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYVVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCIFGWWLFKNRHELKQED-REGQAELRPAADLWEPYKPSAYYYEV 908
BLAST of mRNA_F-serratus_M_contig719.18388.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 273 bits (697), Expect = 3.150e-81 Identity = 127/194 (65.46%), Postives = 159/194 (81.96%), Query Frame = 1
Query: 1 DVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACVYETTFYDRLLIATLGPIVLLVLLGCTYVVALWRNRGRDGALATVRRRHLSVALFIMFILYGTVSHTIFETFMCDEMGGGESYLRADYSLDCTTRMHKAYQVWAAFMVIVYPLGIPCVFGLWLAEHRHDLKADPHRHFNPNLRPAADLWEPYKRNRYYYEV 582
DVAGV+YPGAY+DFLS++D+VNLD+GFILSFACVY+T FYDRLL+AT+GP+++L LLGCTY+VA RNR + A+ V+RRHLSV LF+MF++Y VS+TIFETF+CD + G SYLRADYSL C T +H AY+V+A V+VYP+GIPCVFG WL ++RH+LK + R LRPAADLWEPYK + YYYEV
Sbjct: 735 DVAGVEYPGAYQDFLSVVDVVNLDLGFILSFACVYDTNFYDRLLMATIGPVLVLGLLGCTYLVARRRNRHCEEAMRDVQRRHLSVTLFVMFVIYAAVSYTIFETFVCDTLDDGNSYLRADYSLTCDTPLHTAYRVYAGLAVLVYPVGIPCVFGWWLFKNRHELKQED-RESQAELRPAADLWEPYKPSAYYYEV 927
BLAST of mRNA_F-serratus_M_contig719.18388.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 251 bits (642), Expect = 7.760e-74 Identity = 121/194 (62.37%), Postives = 149/194 (76.80%), Query Frame = 1
Query: 1 DVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACVYETTFYDRLLIATLGPIVLLVLLGCTYVVALWRNRGRDGALATVRRRHLSVALFIMFILYGTVSHTIFETFMCDEMGGGESYLRADYSLDCTTRMHKAYQVWAAFMVIVYPLGIPCVFGLWLAEHRHDLKADPHRHFNPNLRPAADLWEPYKRNRYYYEV 582
DVAGV+YPGAYKDFLS++D+VNLD+GFILS ACV +T FYDRLL+ T+ P V+L LLGCTY+ A+ V+ RHLSVALFIMF++Y TVS+TIFETF+CD + G SYLR+DYSL C T H AY+V+A M++VYP+GIPCVFG WL +HRH+LK + R L+PAADLWEPYK + YYYEV
Sbjct: 740 DVAGVEYPGAYKDFLSVVDVVNLDLGFILSLACVCDTDFYDRLLLTTICPAVVLGLLGCTYL-----------AMGVVKHRHLSVALFIMFVIYATVSYTIFETFVCDPLDDGNSYLRSDYSLTCDTETHTAYRVYAGLMILVYPVGIPCVFGWWLFKHRHELKQEG-RERRAVLKPAADLWEPYKPSTYYYEV 921
BLAST of mRNA_F-serratus_M_contig719.18388.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 202 bits (515), Expect = 4.110e-60 Identity = 101/200 (50.50%), Postives = 131/200 (65.50%), Query Frame = 1
Query: 4 VAGVQYPGAYKDFLSIIDMVNLDVGFILSFACVYETTFYDRLLIATLGPIVLLVLLGCTYVVALWRNRGRDGALATVRRRHLSVALFIMFILYGTVSHTIFETFMCDEMGGGESYLRADYSLDCTTRMHKAYQVWAAFMVIVYPLGIPCVFGLWLAEHRHDL-KADPHRHFNP------NLRPAADLWEPYKRNRYYYEV 582
V V YP Y+ FLSI+++VN + GFILS +CV +T FY RLL AT+GP+V+L L TY V+ RNR + T + +HLS+ALFIMF++Y +VS IF+TF+C+ + G YLRADYSL C+T H A +V+A M+ VYP GIP F LWL +RHDL K D + NL+P DLW PYK RYY+EV
Sbjct: 80 VVNVVYPDVYEKFLSILNLVNFNFGFILSASCVVDTNFYGRLLFATIGPLVVLGALALTYAVSRSRNRHSPAGIQTAKHKHLSIALFIMFVVYSSVSFNIFQTFVCETLDDGVEYLRADYSLVCSTDTHTAMKVYAGLMIFVYPFGIPAFFTLWLVSNRHDLVKVDANGGSTATAKSLGNLQPMRDLWAPYKPRRYYFEV 279
BLAST of mRNA_F-serratus_M_contig719.18388.1 vs. uniprot
Match: A0A6H5JSF5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSF5_9PHAE) HSP 1 Score: 208 bits (529), Expect = 8.140e-59 Identity = 104/194 (53.61%), Postives = 136/194 (70.10%), Query Frame = 1
Query: 4 VAGVQYPGAYKDFLSIIDMVNLDVGFILSFACVYETTFYDRLLIATLGPIVLLVLLGCTYVVALWRNRGRDGALATVRRRHLSVALFIMFILYGTVSHTIFETFMCDEMGGGESYLRADYSLDCTTRMHKAYQVWAAFMVIVYPLGIPCVFGLWLAEHRHDL-KADPHRHFNPNLRPAADLWEPYKRNRYYYEV 582
+AG YP Y+DFL+ + VNLD+GFILS++CV T F+DRLLIAT+GP+V+L LL T+VV RN + A+ V+ +HLS ALF+MF +Y +VS T+F+TF+CD + G SYLRADYSL C T + A++ +AA MV VYP+GIP F L +R DL KAD R NL+P DLWE YK +RYYYE+
Sbjct: 728 IAGFVYPEEYQDFLNALTPVNLDIGFILSYSCVVITDFFDRLLIATIGPVVVLALLALTFVVGRKRNIDSEAAVRAVKNKHLSAALFVMFFIYSSVSFTVFQTFVCDTLDDGVSYLRADYSLTCDTPRYGAFRGYAAVMVCVYPIGIPATFAWLLGSNRQDLQKADRDR--LANLQPLGDLWEAYKPSRYYYEI 919
BLAST of mRNA_F-serratus_M_contig719.18388.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 197 bits (500), Expect = 7.960e-55 Identity = 90/194 (46.39%), Postives = 130/194 (67.01%), Query Frame = 1
Query: 1 DVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACVYETTFYDRLLIATLGPIVLLVLLGCTYVVALWRNRGRDGALATVRRRHLSVALFIMFILYGTVSHTIFETFMCDEMGGGESYLRADYSLDCTTRMHKAYQVWAAFMVIVYPLGIPCVFGLWLAEHRHDLKADPHRHFNPNLRPAADLWEPYKRNRYYYEV 582
DVA V YP Y+ FL +ID++N D+G+++S CV + F+D LL AT+GPI+++ +LG TY A +RNRG D A+A V R+H+S L + F++Y +VS T+F F+CD + SYLRADYS+ C++ H+A Q++A FMV++YP+GIP +G+ L R LK R +P + + LWEPY RYY EV
Sbjct: 719 DVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDEAIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALKDGSCRQAHPQAKTISALWEPYTPKRYYNEV 912
BLAST of mRNA_F-serratus_M_contig719.18388.1 vs. uniprot
Match: D7FUB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB5_ECTSI) HSP 1 Score: 186 bits (471), Expect = 7.810e-54 Identity = 95/200 (47.50%), Postives = 124/200 (62.00%), Query Frame = 1
Query: 4 VAGVQYPGAYKDFLSIIDMVNLDVGFILSFACVYETTFYDRLLIATLGPIVLLVLLGCTYVVALWRNRGRDGALATVRRRHLSVALFIMFILYGTVSHTIFETFMCDEMGGGESYLRADYSLDCTTRMHKAYQVWAAFMVIVYPLGIPCVFGLWLAEHRHDL-------KADPHRHFNPNLRPAADLWEPYKRNRYYYEV 582
V V+YP Y+ FL+ +++VN ++GF LSF CV ET FY RL +TL P+ +L L T+ +A NR + +HLS+ALFI+F Y +VS TIF+TFMC+ + YLRADYSL C+T H +V+A MV+VYP+GIP VF WLA +R DL A P NLRP DLWEPYK RY+YE+
Sbjct: 38 VVDVEYPEIYERFLAALNLVNFNLGFFLSFLCVVETNFYGRLAFSTLLPLAILGGLAATHAIAKRNNRHSQVGMREATDKHLSIALFIVFATYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVRERSSGTATPE-----NLRPMKDLWEPYKPRRYFYEL 232
BLAST of mRNA_F-serratus_M_contig719.18388.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 183 bits (465), Expect = 1.190e-52 Identity = 90/195 (46.15%), Postives = 123/195 (63.08%), Query Frame = 1
Query: 4 VAGVQYPGAYKDFLSIIDMVNLDVGFILSFACVYETTFYDRLLIATLGPIVLLVLLGCTYVVALWRNRGRDGALATVRRRHLSVALFIMFILYGTVSHTIFETFMCDEMGGGESYLRADYSLDCTTRMHKAYQVWAAFMVIVYPLGIPCVFGLWLAEHRHDLKADPHRHFNP--NLRPAADLWEPYKRNRYYYEV 582
V V+YP Y+ FL+ +++VN ++G+ LSF C+ ET FY RL +T+ P+ +L L + +A NR + +HLS+ALFI+F +Y +VS TIF+TFMC+ + YLRADYSL C+T H +V+A MV+VYP+GIP VF WLA +R DL D NLRP DLWEPYK RY+YE+
Sbjct: 60 VVDVEYPEIYERFLAALNLVNFNLGYFLSFLCLVETNFYGRLAFSTIVPLAILGGLAAKHAIAKRNNRHSQVGMREATDKHLSIALFIVFAIYSSVSFTIFQTFMCETLDDEVEYLRADYSLTCSTSTHTIMEVYAGLMVLVYPIGIPAVFAWWLASNRKDLVQDRSGGTTTPENLRPMKDLWEPYKPRRYFYEL 254
BLAST of mRNA_F-serratus_M_contig719.18388.1 vs. uniprot
Match: D7G021_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G021_ECTSI) HSP 1 Score: 183 bits (464), Expect = 4.890e-52 Identity = 91/195 (46.67%), Postives = 130/195 (66.67%), Query Frame = 1
Query: 4 VAGVQYPGAYKDFLSIIDMVNLDVGFILSFACVYETTFYDRLLIATLGPIVLLVLLGCTYVVALWRNRG--RDGALATVRRRHLSVALFIMFILYGTVSHTIFETFMCDEMGGGESYLRADYSLDCTTRMHKAYQVWAAFMVIVYPLGIPCVFGLWLAEHRHDLKADPHRHFNPNLRPAADLWEPYKRNRYYYEV 582
+ G P Y+ F+ ++++N +V +LSF+C+ +T F+DRLL TLGP+ +L +L T+V+A RNR D TVRR+HLS+A+FI+F +Y +VS IF TF C+ + G SYLRADY C +R H A++V+A MV+VYPLGIP +FG WL +RHDL++ P R N +L PA LWE YK +Y+ +
Sbjct: 1 MTGAHDPDTYEAFVERLNVINFNVRDLLSFSCLVKTDFFDRLLWKTLGPLAVLGVLQATHVIARLRNRNIPSDSVQLTVRRKHLSLAIFILFFVYSSVSRDIFLTFSCETLEDGVSYLRADYGFVCFSRRHVAFRVYAGVMVLVYPLGIPALFGWWLRRNRHDLRS-PSRAENADLEPAKALWESYKGETWYFII 194
BLAST of mRNA_F-serratus_M_contig719.18388.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 186 bits (471), Expect = 7.480e-51 Identity = 87/195 (44.62%), Postives = 132/195 (67.69%), Query Frame = 1
Query: 4 VAGVQYPGAYKDFLSIIDMVNLDVGFILSFACVYETTFYDRLLIATLGPIVLLVLLGCTYVVALWRNRGRDGALATVRRRHLSVALFIMFILYGTVSHTIFETFMCDEMGGGESYLRADYSLDCTTRMHKAYQVWAAFMVIVYPLGIPCVFGLWLAEHRHDLKADP--HRHFNPNLRPAADLWEPYKRNRYYYEV 582
VA V YP Y+ FL ++++N DV +I S C+ E F+ RLL+AT+GP+V L LL TY VA R+ G + AL +R +H+S+ L I F++Y +VS T+F++F C+++ + YLRADY ++C + H+A+QV+A M++VYP+GIP +G L +HR LK++ R +P ++P +DLW PYK R+YYEV
Sbjct: 1451 VANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSSGSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEV 1645 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig719.18388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig719.18388.1 >prot_F-serratus_M_contig719.18388.1 ID=prot_F-serratus_M_contig719.18388.1|Name=mRNA_F-serratus_M_contig719.18388.1|organism=Fucus serratus male|type=polypeptide|length=196bp DVAGVQYPGAYKDFLSIIDMVNLDVGFILSFACVYETTFYDRLLIATLGPback to top mRNA from alignment at F-serratus_M_contig719:86161..86748+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig719.18388.1 ID=mRNA_F-serratus_M_contig719.18388.1|Name=mRNA_F-serratus_M_contig719.18388.1|organism=Fucus serratus male|type=mRNA|length=588bp|location=Sequence derived from alignment at F-serratus_M_contig719:86161..86748+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig719:86161..86748+ >mRNA_F-serratus_M_contig719.18388.1 ID=mRNA_F-serratus_M_contig719.18388.1|Name=mRNA_F-serratus_M_contig719.18388.1|organism=Fucus serratus male|type=CDS|length=1176bp|location=Sequence derived from alignment at F-serratus_M_contig719:86161..86748+ (Fucus serratus male)back to top |