mRNA_F-serratus_M_contig719.18389.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig719.18389.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI) HSP 1 Score: 174 bits (440), Expect = 3.690e-48 Identity = 91/109 (83.49%), Postives = 100/109 (91.74%), Query Frame = 2
Query: 2 ECVRRIALTGFAVFIYPESSAQIAVVLLLAVIFMVMSEILCPFVRPVEMWLYRAGHYVVFASMYLALLLRVDVSSERTQSQEVFSGVLVIAHVTMILVVIAQGVFVFVG 328
EC RRIALTGFAVFIYP+SSAQ+A+VLLLA +FMV+SEIL PF RPVEMWLYRAGHYVVFASMYLALLLRVDVS ER QSQEVFSGV+VIAHV M LVV+AQG+ +FVG
Sbjct: 929 ECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVIAHVAMFLVVVAQGLLIFVG 1037
BLAST of mRNA_F-serratus_M_contig719.18389.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE) HSP 1 Score: 171 bits (433), Expect = 3.240e-47 Identity = 89/109 (81.65%), Postives = 99/109 (90.83%), Query Frame = 2
Query: 2 ECVRRIALTGFAVFIYPESSAQIAVVLLLAVIFMVMSEILCPFVRPVEMWLYRAGHYVVFASMYLALLLRVDVSSERTQSQEVFSGVLVIAHVTMILVVIAQGVFVFVG 328
EC RRIALTGFAVFIYP+SSAQ+A+VLLLA +FMV+SEIL PF RPVEMWLYRAGHYVVFASMYLALLLRVDVS ER QSQEVFSGV+V+AHV M LVV+ QG+ +FVG
Sbjct: 910 ECFRRIALTGFAVFIYPDSSAQVAIVLLLAAVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDERDQSQEVFSGVIVMAHVAMFLVVVVQGLLIFVG 1018
BLAST of mRNA_F-serratus_M_contig719.18389.1 vs. uniprot
Match: D7FTU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU5_ECTSI) HSP 1 Score: 169 bits (427), Expect = 2.080e-46 Identity = 87/109 (79.82%), Postives = 97/109 (88.99%), Query Frame = 2
Query: 2 ECVRRIALTGFAVFIYPESSAQIAVVLLLAVIFMVMSEILCPFVRPVEMWLYRAGHYVVFASMYLALLLRVDVSSERTQSQEVFSGVLVIAHVTMILVVIAQGVFVFVG 328
EC RRIALTGFAVFIYP+SSAQ+A+VLLLA++FMV+SE L PF RPVEMWLYR GHYVVFASMYLALLLRVDVS ER QSQEVFSGVLVIAH M+LVV+ QG+ +F G
Sbjct: 923 ECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPVEMWLYRTGHYVVFASMYLALLLRVDVSDERNQSQEVFSGVLVIAHAAMLLVVVLQGLLIFAG 1031
BLAST of mRNA_F-serratus_M_contig719.18389.1 vs. uniprot
Match: D7FTU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU0_ECTSI) HSP 1 Score: 161 bits (407), Expect = 3.640e-46 Identity = 85/109 (77.98%), Postives = 97/109 (88.99%), Query Frame = 2
Query: 2 ECVRRIALTGFAVFIYPESSAQIAVVLLLAVIFMVMSEILCPFVRPVEMWLYRAGHYVVFASMYLALLLRVDVSSERTQSQEVFSGVLVIAHVTMILVVIAQGVFVFVG 328
EC RRIALTGFAVFIYP+SSAQIA+VLLLAV+FMV+SEIL PF RPVEMWLYRAGHYVVFASMYLALLLRVDVS E QSQ VF+ V+V+AH M+LVV+ QG+ +F+G
Sbjct: 58 ECFRRIALTGFAVFIYPDSSAQIAIVLLLAVVFMVVSEILSPFARPVEMWLYRAGHYVVFASMYLALLLRVDVSDEGDQSQGVFAVVVVVAHACMVLVVLGQGLLIFMG 166
BLAST of mRNA_F-serratus_M_contig719.18389.1 vs. uniprot
Match: A0A6H5L0E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0E1_9PHAE) HSP 1 Score: 166 bits (421), Expect = 1.310e-45 Identity = 85/109 (77.98%), Postives = 96/109 (88.07%), Query Frame = 2
Query: 2 ECVRRIALTGFAVFIYPESSAQIAVVLLLAVIFMVMSEILCPFVRPVEMWLYRAGHYVVFASMYLALLLRVDVSSERTQSQEVFSGVLVIAHVTMILVVIAQGVFVFVG 328
EC RRIALTGFAVFIYP+SSAQ+A+VLLLA++FMV+SE L PF RP+EMWLYR GHYVVFASMYLALLLRVDVS E QSQEVFSGVLVIAH M+LVV+ QG+ +F G
Sbjct: 168 ECFRRIALTGFAVFIYPDSSAQVAIVLLLAIVFMVVSEFLSPFARPIEMWLYRTGHYVVFASMYLALLLRVDVSDENNQSQEVFSGVLVIAHAAMLLVVVLQGLLIFAG 276
BLAST of mRNA_F-serratus_M_contig719.18389.1 vs. uniprot
Match: D7G021_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G021_ECTSI) HSP 1 Score: 124 bits (310), Expect = 4.100e-31 Identity = 64/105 (60.95%), Postives = 83/105 (79.05%), Query Frame = 2
Query: 2 ECVRRIALTGFAVFIYPESSAQIAVVLLLAVIFMVMSEILCPFVRPVEMWLYRAGHYVVFASMYLALLLRVDVSSERTQSQEVFSGVLVIAHVTMILVVIAQGVF 316
ECVRRIALTG VFI P S+AQ+A++LLLA F+V+SE+L PF +P+E WLY +G V+FASMY ALLL+VDVS+E ++SQ FS VL+++HV + V AQGVF
Sbjct: 196 ECVRRIALTGLGVFINPNSAAQVAILLLLAFGFLVLSEVLDPFEKPIETWLYLSGSCVIFASMYAALLLKVDVSNENSESQTAFSAVLILSHVVLFTTVFAQGVF 300
BLAST of mRNA_F-serratus_M_contig719.18389.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE) HSP 1 Score: 115 bits (287), Expect = 1.540e-27 Identity = 59/104 (56.73%), Postives = 79/104 (75.96%), Query Frame = 2
Query: 2 ECVRRIALTGFAVFIYPESSAQIAVVLLLAVIFMVMSEILCPFVRPVEMWLYRAGHYVVFASMYLALLLRVDVSSERTQSQEVFSGVLVIAHVTMILVVIAQGV 313
EC RRIALTG A F+ P+S+AQ+A+ ++LA IFM +S++L PF P + WLYR G +++F SMYLALLL+VD S E +QSQ F+ VL+ AHV M+LVV+ Q V
Sbjct: 957 ECGRRIALTGLAAFLLPDSAAQVAIEVVLAAIFMAVSDVLSPFADPFDGWLYRTGAWIIFFSMYLALLLKVDASDEDSQSQAAFAKVLIAAHVGMVLVVLVQAV 1060
BLAST of mRNA_F-serratus_M_contig719.18389.1 vs. uniprot
Match: A0A6H5L4E3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4E3_9PHAE) HSP 1 Score: 110 bits (275), Expect = 2.150e-27 Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 2
Query: 2 ECVRRIALTGFAVFIYPESSAQIAVVLLLAVIFMVMSEILCPFVRPVEMWLYRAGHYVVFASMYLALLLRVDVSSERTQSQEVFSGVLVIAHVTMILVVIAQGV 313
EC RRI LTG A F+ P+S+AQ+A+ ++LA IFM +S++L PFV P WLYR G +++F SMYLALLL+VDVS E QSQ F+ VL+ AH M+ V++ Q V
Sbjct: 110 ECGRRIVLTGLAAFLLPKSAAQVAIEVVLAAIFMAVSDVLPPFVDPFGAWLYRIGGWIIFFSMYLALLLKVDVSDEDNQSQAAFAKVLIAAHAGMVAVIVGQAV 213
BLAST of mRNA_F-serratus_M_contig719.18389.1 vs. uniprot
Match: D7FPF7_ECTSI (Probable extracellular nuclease (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF7_ECTSI) HSP 1 Score: 110 bits (274), Expect = 3.230e-26 Identity = 56/104 (53.85%), Postives = 79/104 (75.96%), Query Frame = 2
Query: 2 ECVRRIALTGFAVFIYPESSAQIAVVLLLAVIFMVMSEILCPFVRPVEMWLYRAGHYVVFASMYLALLLRVDVSSERTQSQEVFSGVLVIAHVTMILVVIAQGV 313
EC RRIALTG AVFIYP S+AQ+A+ ++ A F+ +S++L PF P++ WLYR+G +V+F SM+L LLL+VD S E +QSQE+F+ +L+ AHV M+L + Q V
Sbjct: 281 ECGRRIALTGLAVFIYPGSAAQVALEVVFAAFFIGISDVLSPFADPLDAWLYRSGAWVIFISMFLTLLLKVDASDEDSQSQELFAKLLISAHVGMVLAIAVQAV 384
BLAST of mRNA_F-serratus_M_contig719.18389.1 vs. uniprot
Match: A0A6H5KHA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHA3_9PHAE) HSP 1 Score: 108 bits (271), Expect = 8.860e-26 Identity = 56/103 (54.37%), Postives = 77/103 (74.76%), Query Frame = 2
Query: 2 ECVRRIALTGFAVFIYPESSAQIAVVLLLAVIFMVMSEILCPFVRPVEMWLYRAGHYVVFASMYLALLLRVDVSSERTQSQEVFSGVLVIAHVTMILVVIAQG 310
EC RRI LTG AVF++P ++AQ+A+ + A +V+ E+L PFV P++ WLYR+G VVF SMYLALLL+VD S E ++SQ+VF+ VLV AHV+M+L V+
Sbjct: 256 ECGRRIVLTGLAVFLFPGTAAQVAIEVAFAAGLLVVFEVLAPFVDPMDAWLYRSGALVVFFSMYLALLLKVDASDENSESQQVFAAVLVAAHVSMVLAVLLSS 358 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig719.18389.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig719.18389.1 >prot_F-serratus_M_contig719.18389.1 ID=prot_F-serratus_M_contig719.18389.1|Name=mRNA_F-serratus_M_contig719.18389.1|organism=Fucus serratus male|type=polypeptide|length=110bp GVCPSDCLDGVCGVHLPRELGADSSRSSTCGDFHGYVGDPLPVRPSGRDVback to top mRNA from alignment at F-serratus_M_contig719:87283..87613+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig719.18389.1 ID=mRNA_F-serratus_M_contig719.18389.1|Name=mRNA_F-serratus_M_contig719.18389.1|organism=Fucus serratus male|type=mRNA|length=331bp|location=Sequence derived from alignment at F-serratus_M_contig719:87283..87613+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig719:87283..87613+ >mRNA_F-serratus_M_contig719.18389.1 ID=mRNA_F-serratus_M_contig719.18389.1|Name=mRNA_F-serratus_M_contig719.18389.1|organism=Fucus serratus male|type=CDS|length=660bp|location=Sequence derived from alignment at F-serratus_M_contig719:87283..87613+ (Fucus serratus male)back to top |