prot_F-serratus_M_contig719.18386.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig719.18386.1
Unique Nameprot_F-serratus_M_contig719.18386.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length104
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig719.18386.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatPFAMPF02415Chlam_PMPcoord: 38..53
e-value: 0.14
score: 12.7
coord: 65..80
e-value: 0.047
score: 14.2
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 7..31
e-value: 2.9E-5
score: 21.7
coord: 36..56
e-value: 1.1E-4
score: 19.9
coord: 63..80
e-value: 6.5E-4
score: 17.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig719contigF-serratus_M_contig719:78506..80437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig719.18386.1mRNA_F-serratus_M_contig719.18386.1Fucus serratus malemRNAF-serratus_M_contig719 78506..80437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig719.18386.1 ID=prot_F-serratus_M_contig719.18386.1|Name=mRNA_F-serratus_M_contig719.18386.1|organism=Fucus serratus male|type=polypeptide|length=104bp
DSVVQINGRTSFLLNSAGDLGGAISAGNRVIVSTVGPTRFSRNSASSGGA
LCSSQVAIVSFQGKTLFDNNTASNDGGALHFMFSRVSIGGSSEFIFNDAV
DGSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat