mRNA_F-serratus_M_contig718.18382.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig718.18382.1 vs. uniprot
Match: D7FKM9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKM9_ECTSI) HSP 1 Score: 399 bits (1024), Expect = 4.310e-131 Identity = 214/285 (75.09%), Postives = 244/285 (85.61%), Query Frame = 1
Query: 412 QSESAASSAVSGLVAGAAVSTSKQLLLHPVDTIKTRLQVRGKGDAEIASPELFSGLYNGVVPPLLAGLPSGAVFFSAKDAFGTAIANAVGDGYADLATVAAVGLAQFPYWGIRTPAELLKTRSQAGVSKEGGGGGLEAAKKIVADEGVKGLYTGYGSNIAYAFPADAVKFLVYETLKRSARRAKGGAKLSPVEAAVLGSGATFVAQATTTPLDVVRTRVMSSSASDQPYKGGVPGALMSISREEGFGALWKGTTPRLARSILSGAIQFGAYEFVKGFFGVEPRKL 1266
+SESAASSA+SGLVAGAAVSTSKQLLL+PVDT+KTRLQ+ G + PELF GLY+GV+PPLLAGLPSGA+FFSAKDAF TAI+N G YA+L T+AAVGLAQFPYWGIRTPAELLK RSQAG+S G G G E AK I+ADEG++GLYTGY SNIAYAFPADA+KFLVY LKRSA++AKGGAKLS +EAAVLGSGA+ AQA TTPLDVVRTRVM++ + D+ Y+GGV GAL +ISREE F ALW G PR+ARS+LSGAIQFG+YEFVKG FGVEPRKL
Sbjct: 129 ESESAASSAISGLVAGAAVSTSKQLLLYPVDTVKTRLQLPQDG----SPPELFRGLYDGVLPPLLAGLPSGALFFSAKDAFSTAISNVSGGQYAELTTIAAVGLAQFPYWGIRTPAELLKIRSQAGLSS-GSGAGFEGAKSILADEGLRGLYTGYSSNIAYAFPADAIKFLVYGALKRSAKKAKGGAKLSTIEAAVLGSGASLAAQAVTTPLDVVRTRVMTAPSDDEGYEGGVLGALGTISREESFSALWAGINPRMARSVLSGAIQFGSYEFVKGLFGVEPRKL 408
BLAST of mRNA_F-serratus_M_contig718.18382.1 vs. uniprot
Match: A0A8J5XTW0_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XTW0_DIALT) HSP 1 Score: 223 bits (568), Expect = 1.940e-63 Identity = 129/282 (45.74%), Postives = 180/282 (63.83%), Query Frame = 1
Query: 457 GAAVSTSKQLLLHPVDTIKTRLQVRGKGDAEIASPELFSGLYNGVVPPLLAGLPSGAVFFSAKDAFGTAIANAVGDGYA-----DLATVAAVGLAQFPYWGIRTPAELLKTRSQAGVSKEGGGGGLEAAKKIVADEGVKGLYTGYGSNIAYAFPADAVKFLVYETLKRSARRAKGGAKLSPVEAAVLGSGATFVAQATTTPLDVVRTRVMSSSASDQPYKGGVPGALMSIS-------------REEGFGALWKGTTPRLARSILSGAIQFGAYEFVKGFFG 1248
GAA +K+LLLHP+DT++ RL+++G + +A P LF+ LY GV+P + G+PSGA+FF+AKD + A+G Y ++ TV AV AQ PYW +RTP ELLKTR+Q G++ GG G +A ++V EGV GL+ G GSN+AYA P D VKF+ YE++KR A+RAKGG LS +EA+ G+ + +AQA TPLDVVRTRV+++ + G A + ++ RE+G GAL+ G PR+ R++ SG IQFGAYE + FG
Sbjct: 108 GAAQRLAKELLLHPIDTVRCRLELQGARRSLLA-PGLFADLYAGVLPSAVVGVPSGALFFAAKDGAKAWLRGALGSAYGGSYSKEVTTVLAVLAAQLPYWALRTPFELLKTRAQLGLTA-GGEGAWRSAARVVEAEGVAGLFVGAGSNVAYAAPTDVVKFVAYESIKRQAKRAKGGGSLSTLEASACGALGSAIAQALCTPLDVVRTRVIAAQPTGGVADGAATDAAIELADARNFGKVAARLVREDGAGALFAGLLPRVGRAVASGGIQFGAYEATRRLFG 387
BLAST of mRNA_F-serratus_M_contig718.18382.1 vs. uniprot
Match: W7TEJ8_9STRA (S-adenosylmethionine mitochondrial carrier n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEJ8_9STRA) HSP 1 Score: 223 bits (568), Expect = 7.620e-63 Identity = 137/277 (49.46%), Postives = 176/277 (63.54%), Query Frame = 1
Query: 439 VSGLVAGAAVSTSKQLLLHPVDTIKTRLQVRGKGDAEIASPELFSGLYNGVVPPLLAGLPSGAVFFSAKDAFGTAIANAVGDGYADLATVAAVGLAQFPYWGIRTPAELLKTRSQAGVSKEGGGGGLEAAKKIVADEGVKGLYTGYGSNIAYAFPADAVKFLVYETLKRSARRAKGGAKLSPVEAAVLGSGATFVAQATTTPLDVVRTRVMSSSAS----DQPYKGGVPGALMSISR----EEGFGALWKGTTPRLARSILSGAIQFGAYEFVKGFF 1245
+SGL GAA SK+L LHP+DT KTRLQ KG+ A ELF LY+GV P LL G P+GA FF+ KD N+ G+ + + T+AAV A PYW IR PAE+LKT+ Q G+ GG +EA K+ EG++GLY GY SNIAYAFP DA+KF+VYE L++S R KL+P+E++VLGS A+ VAQ +TPLDVVRTR+M+ A+ + P ++ +R EEG L+ G PRL R+ LSGAIQFG+YE KG F
Sbjct: 173 LSGLAGGAASRASKELFLHPIDTWKTRLQY-AKGNE--APAELFKNLYDGVWPALLVGTPAGAAFFATKDVLKGLARNSFGNEFREATTIAAVFAANIPYWLIRNPAEVLKTQQQTGLIDSTAGGTIEAVKQ----EGLEGLYRGYVSNIAYAFPTDAIKFVVYEALQKSFSR-----KLNPLESSVLGSAASSVAQLMSTPLDVVRTRIMTDEAALTNDNVPVSPASTTSVWQTARKIAAEEGVAKLFSGLFPRLTRAFLSGAIQFGSYELTKGAF 437
BLAST of mRNA_F-serratus_M_contig718.18382.1 vs. uniprot
Match: A0A7S1TRM5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRM5_9STRA) HSP 1 Score: 209 bits (532), Expect = 4.050e-59 Identity = 124/268 (46.27%), Postives = 160/268 (59.70%), Query Frame = 1
Query: 445 GLVAGAAVSTSKQLLLHPVDTIKTRLQVRGKGDAEIASPELFSGLYNGVVPPLLAGLPSGAVFFSAKDAFGTAIANAVGDGYADLATVAAVGLAQFPYWGIRTPAELLKTRSQAGVSKEGGGGGLEAAKKIVADEGVKGLYTGYGSNIAYAFPADAVKFLVYETLKRSARRAKGGAKLSPVEAAVLGSGATFVAQATTTPLDVVRTRVMSSSASDQPYKGGVPGALMSISREEGFGALWKGTTPRLARSILSGAIQFGAYEFVKGFFG 1248
GL+AG T+K L+LHP DT+KTR+QV + A LF+ LY+G++PPL+AG P A+FF+ KD +A + + T+ AV LA PYW ++TPAE +KTR QA A + E + LY GYGSN+AYAFP D +KFL+YE LKRSA+ A GG KLSP+ A LGS + AQA TTPLDV+RTR+M A + G AL + EEG G L+ GT R+ R +L GA+QF YE K FG
Sbjct: 43 GLLAGGVSRTAKLLVLHPADTVKTRVQVGAIAGRQGA---LFADLYDGILPPLVAGTPGSALFFAVKDLVQSAAREGAWGLDSRVVTMIAVFLANIPYWSLQTPAEAIKTRLQARDKDVEPVTPDPAESDVSLRERAEDLYAGYGSNLAYAFPVDVIKFLIYEELKRSAKEANGGQKLSPLRTAFLGSISAATAQALTTPLDVLRTRIMLKGADAEGGAGEEVAALRAAIEEEGVGVLFAGTPQRVLRGMLGGAVQFSTYEVSKQLFG 307
BLAST of mRNA_F-serratus_M_contig718.18382.1 vs. uniprot
Match: A0A0G4F9G4_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4F9G4_9ALVE) HSP 1 Score: 211 bits (537), Expect = 1.440e-57 Identity = 133/306 (43.46%), Postives = 184/306 (60.13%), Query Frame = 1
Query: 439 VSGLVAGAAVSTSKQLLLHPVDTIKTRLQVRGKGDAEIASPELFSGLYNGVVPPLLAGLPSGAVFFSAKD-AFGTAIANAVGDGY-----ADLATVAAVGLAQFPYWGIRTPAELLKTRSQAGVSKEGGGGGLEAAKKIVADEGVKGLYTGYGSNIAYAFPADAVKFLVYETLKRS---ARRAKGGA-KLSPVEAAVLGSGATFVAQATTTPLDVVRTRVMSSSASDQPYKG---------------------GVPGALMSISREEGFGALWKGTTPRLARSILSGAIQFGAYEFVKGFFGVEPRK 1263
+SGL++GAA +K+++LHP+DT+K RLQ R A + SP + GLY+GVVP L+ G P+G++FF KD A TA+ G L+T+A V A PYW +R PAEL+KTR Q GV+ + ++A +++V D+G+ GLY GYGSN AYA P D VKFLVY+ +KR A+R +G KLS +E A+ G+ A+ VAQ +TPLDV+RTR+M+S ++ KG G+ I EG G L+ G +PR+AR+++SGAIQF YE VK FG E K
Sbjct: 222 LSGLLSGAASRIAKEVVLHPIDTVKARLQFRE--GARVFSPSMLKGLYDGVVPALVVGTPAGSLFFGVKDVASKTALEVLKAKGIEGLTGTQLSTIAGVVAASIPYWAVRQPAELVKTRRQTGVATDS----VKAFQEVVEDDGIGGLYQGYGSNFAYAVPTDIVKFLVYDNVKRQWQQAKRQRGEKDKLSTLEGAIGGAAASCVAQIVSTPLDVIRTRLMTS---EKKRKGRLTAEEGQGXXXXXXXXREYEGILDCGRKIVEREGAGMLFAGISPRIARAVVSGAIQFSTYELVKNLFGEEAAK 518
BLAST of mRNA_F-serratus_M_contig718.18382.1 vs. uniprot
Match: A0A0M0K8D7_9EUKA (S-adenosylmethionine mitochondrial carrier protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8D7_9EUKA) HSP 1 Score: 201 bits (511), Expect = 5.930e-56 Identity = 119/266 (44.74%), Postives = 169/266 (63.53%), Query Frame = 1
Query: 439 VSGLVAGAAVSTSKQLLLHPVDTIKTRLQVRGKGDAEIASPELFSGLYNGVVPPLLAGLPSGAVFFSAKDAFGTAIANAVGDGYADLATVAAVGLAQFPYWGIRTPAELLKTRSQAGVSKEGGGGGLEAAKKIVADEGVKGLYTGYGSNIAYAFPADAVKFLVYETLKRSARRAKGGAKLSPVEAAVLGSGATFVAQATTTPLDVVRTRVMSSSASDQPYKGGVPGALMSISREEGFGALWKGTTPRLARSILSGAIQFGAYEFVK 1236
+SGL+AG A T K++ LHP+DT+KTRLQ+ + P L+ +Y+G+ P +++G P+ +VFF+ KD+ + +GD TVAAVG A YW +R PAE++K R Q+G + AA + + G G Y GY SN+AYAFP D+ KF++Y +K + RR+KGGAKLSP+EAAV G+ AT AQ +TPLDV RTR+M+ A DQP G V L +++ EEG L+ G P++AR+++SGA+QF E VK
Sbjct: 59 LSGLIAGFAQKTIKEVTLHPLDTVKTRLQLTSTRRG-LLDPALYKDVYSGLAPAVVSGAPAASVFFAIKDSVLQQLKPQLGD---TGGTVAAVGCANLVYWLVRNPAEVIKVRRQSGGESDS----AAAATALWREIGPGGFYRGYASNVAYAFPVDSSKFVLYSAIKDAWRRSKGGAKLSPLEAAVGGALATMAAQGVSTPLDVARTRIMTLPA-DQPAPG-VLATLKAVADEEGLRGLYAGLAPKVARALVSGALQFSVLEGVK 314
BLAST of mRNA_F-serratus_M_contig718.18382.1 vs. uniprot
Match: A0A7S4C3C4_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C3C4_CHRCT) HSP 1 Score: 202 bits (514), Expect = 7.880e-56 Identity = 123/268 (45.90%), Postives = 169/268 (63.06%), Query Frame = 1
Query: 442 SGLVAGAAVSTSKQLLLHPVDTIKTRLQVRGKG-DAEIASPELFSGLYNGVVPPLLAGLPSGAVFFSAKDAFGTAIANAVGDGYADLATVAAVGLAQFPYWGIRTPAELLKTRSQAGVSKEGGGGGLEAAKKIVADEGVKGLYTGYGSNIAYAFPADAVKFLVYETLKRSARRAKGGAKLSPVEAAVLGSGATFVAQATTTPLDVVRTRVMSSSASDQPYKGGVPGALMSISREEGFGALWKGTTPRLARSILSGAIQFGAYEFVKGF 1242
SGL+AGA T+K+L+LHP+DT+KTR+Q + ++ F+GL P + +G P+ +VFF+ KDA ANA+ AT+ AV A PYW +R P E++K R QAG+ + LEAA+K+ A+EG++G YTGY SN AYA+P D++KF++YE LK+ R AKGGAKLS VE+AV G+ + AQ+ TPLDV RTR M+ A P + +I+ EEG AL+ G TP+ R++LSGAIQF YE K F
Sbjct: 109 SGLIAGAVQKTAKELVLHPLDTVKTRVQTSRRALTLDLFLDRPFAGLG----PAITSGAPAASVFFAVKDAVKQR-ANAL-QLDTSAATLLAVACANVPYWLVRNPTEVIKARRQAGIVDDS----LEAARKLYAEEGLRGFYTGYVSNYAYAYPVDSIKFVLYELLKKRVRAAKGGAKLSAVESAVGGAVSAVSAQSLATPLDVARTRAMTRPAGAPPMSP--IECVRAIAAEEGLPALFSGVTPKAVRAVLSGAIQFSTYEATKDF 364
BLAST of mRNA_F-serratus_M_contig718.18382.1 vs. uniprot
Match: A0A7S0F5T5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0F5T5_9EUKA) HSP 1 Score: 193 bits (490), Expect = 1.310e-53 Identity = 120/269 (44.61%), Postives = 163/269 (60.59%), Query Frame = 1
Query: 442 SGLVAGAAVSTSKQLLLHPVDTIKTRLQVRGKGDAEIASPELFSGLYNGVVPPLLAGLPSGAVFFSAKDAFGTAIANAVGDGYADLA----TVAAVGLAQFPYWGIRTPAELLKTRSQAGVSKEGGGGGLEAAKKIVADEGVKGLYTGYGSNIAYAFPADAVKFLVYETLKRSARRAKGGAKLSPVEAAVLGSGATFVAQATTTPLDVVRTRVMSSSASDQPYKGGVPGALMSISREEGFGALWKGTTPRLARSILSGAIQFGAYEFVK 1236
SGL+AGA T K+L LHP+DT+K RLQV G + S ELF+ Y G+ P L++G P+ + FF+ KDA + A++ DL T+ +VG A YWG++ P+E+LK R QAGV+ + L AA + +EG+ G Y YGSN AY+ P DA+KFL+YE LK + + G L+PVEAA+ G+ A AQA TPLDV R R+M+S A+ GV + I+ EG GAL+ G P++ R+I SGAIQF YE K
Sbjct: 5 SGLLAGAVQKTVKELALHPLDTVKARLQV-ATGRRALMS-ELFAAPYAGLTPALVSGAPAASAFFAVKDAVKRSAASS------DLGKTPITLLSVGAANVAYWGVKNPSEVLKVRRQAGVTNDT----LGAAADLWRNEGLSGFYNSYGSNYAYSTPVDAIKFLLYEQLKGQFKERRQGGSLTPVEAAIGGAIAASTAQAIATPLDVARVRIMTSDAT------GVVDTMRDIADNEGGGALYAGIAPKVVRAIASGAIQFSTYEATK 255
BLAST of mRNA_F-serratus_M_contig718.18382.1 vs. uniprot
Match: A0A0G4FJA6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FJA6_VITBC) HSP 1 Score: 197 bits (500), Expect = 3.190e-53 Identity = 122/293 (41.64%), Postives = 166/293 (56.66%), Query Frame = 1
Query: 439 VSGLVAGAAVSTSKQLLLHPVDTIKTRLQVRGKGDAEIASPELFSGLYNGVVPPLLAGLPSGAVFFSAKDAFGTAIANAVGDGYADLATVAAVGLAQFPYWGIRTPAELLKTRSQAGVSKEGGGGGLEAAKKIVADEGVKGLYTGYGSNIAYAFPADAVKFLVYETLKRSARRAKGGAKLSPVEAAVLGSGATFVAQATTTPLDVVRTRVMS------SSASDQPYK--------------------GGVPGALMSISREEGFGALWKGTTPRLARSILSGAIQFGAYEFVKG 1239
+SGL G A K +LHP+DT++ RLQ+R + + LF LY G+VPPL+ G P+ A+FF KD +A A G + T AAV A PYW +RTP+E++KTR QAG++ L+ +K V +G+ GLYTGY +NIAYA+P D +KFLVY++LK + G +L+ +E GS A+ AQ T PLDV+RTR+M+ S A+ P G+ M I+ EEG LW G +PRL R++LSGAIQFG+YE VKG
Sbjct: 145 ISGLAGGGASRLGKDAILHPLDTLRARLQLRNQ-----TNDGLFDDLYRGIVPPLVVGTPASALFFGVKDTSMAYLAQAGLSGNLQVRTSAAVLAASVPYWLVRTPSEVVKTRCQAGLANNT----LDGIRKTVEQDGIGGLYTGYNANIAYAYPTDVIKFLVYDSLKAAL-----GGELTLLEKTAAGSLASCTAQLFTNPLDVIRTRLMTQDKRETSVAAASPAXXXXXXXXXXXXXXXXXXAAYSGIVDCGMRIATEEGPARLWSGVSPRLVRAVLSGAIQFGSYELVKG 423
BLAST of mRNA_F-serratus_M_contig718.18382.1 vs. uniprot
Match: A0A7S3JUU9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUU9_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.240e-51 Identity = 130/303 (42.90%), Postives = 175/303 (57.76%), Query Frame = 1
Query: 358 VAAAAIPPAVGENRLASEQSESAASSAVSGLVAGAAVSTSKQLLLHPVDTIKTRLQVRGKGDAEIASPELFSGLYNGVVPPLLAGLPSGAVFFSAKDAFGTAIANAVGDGY-ADLATVAAVGLAQFPYWGIRTPAELLKTRSQAGVSKEGGGGGLEAAKKIVADEGVKGLYTGYGSNIAYAFPADAVKFLVYETLKRSARRAKGGAKLSPVEAAVLGSGATFVAQATTTPLDVVRTRVMSSSA--SDQPYKGG---VPGALMSISREEGFGALWKGTTPRLARSILSGAIQFGAYEFVKGFFG 1248
+AAAA P E S + ++ S +SGL GAA SK ++LHP+DT+KTRLQ G + + +F+ ++G++ PLL G+P+GA+FF KDA TA+ + G+ DL V +A PYW IR+P EL+K R Q + G + AK I+ EG+ GLY G + AYA P D VKF VY LK+S+ L + A+LGS A+ AQ TTPLDVVRTR M S GG +P ++I REEG GALW G +PRL R+++SG +QFG+YEF K FG
Sbjct: 49 LAAAAAVPTEKETNFVSNRQQTTQSEFISGLAGGAAQRLSKDIVLHPIDTVKTRLQRAG---SRRLTRRIFADPFDGILAPLLIGVPAGALFFGVKDA--TAV---LCKGFNEDLVEFTTVAVANGPYWFIRSPTELIKVRQQLDGTTINMTG-ITLAKDIIQKEGLSGLYVGAIESYAYALPTDLVKFYVYRKLKKSSLPLTSTKNLV-AKKAILGSIASASAQLVTTPLDVVRTRAMEKRTPQSTTTTTGGDLSIPERTLAIIREEGVGALWSGISPRLLRALVSGGLQFGSYEFTKKAFG 341 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig718.18382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig718.18382.1 >prot_F-serratus_M_contig718.18382.1 ID=prot_F-serratus_M_contig718.18382.1|Name=mRNA_F-serratus_M_contig718.18382.1|organism=Fucus serratus male|type=polypeptide|length=419bp MCNLRVSLATTLFVSSTAYAYLTTIPKRLPLRSEASRQCGQAEEIFKARVback to top mRNA from alignment at F-serratus_M_contig718:340359..350832- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig718.18382.1 ID=mRNA_F-serratus_M_contig718.18382.1|Name=mRNA_F-serratus_M_contig718.18382.1|organism=Fucus serratus male|type=mRNA|length=10474bp|location=Sequence derived from alignment at F-serratus_M_contig718:340359..350832- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig718:340359..350832- >mRNA_F-serratus_M_contig718.18382.1 ID=mRNA_F-serratus_M_contig718.18382.1|Name=mRNA_F-serratus_M_contig718.18382.1|organism=Fucus serratus male|type=CDS|length=2514bp|location=Sequence derived from alignment at F-serratus_M_contig718:340359..350832- (Fucus serratus male)back to top |