prot_F-serratus_M_contig7174.18377.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig7174.18377.1
Unique Nameprot_F-serratus_M_contig7174.18377.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length286
Homology
BLAST of mRNA_F-serratus_M_contig7174.18377.1 vs. uniprot
Match: A0A0J7KAH3_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KAH3_LASNI)

HSP 1 Score: 76.6 bits (187), Expect = 5.530e-12
Identity = 68/276 (24.64%), Postives = 127/276 (46.01%), Query Frame = 0
Query:    6 VQHCQAPNEAWRNLELHYRAKGTREILRLSHEINGKTMEPGSDPFKFMMEVDKLAGDLHRLGDKSVTELRRCVIIVSGLSADYEMECRMLENNPDGLNRGEIERVVGNQYNRLLRQQQDSKALSASRGTITANRENGKNRRPSNKFEGKCFNCGKRGHRAVECKGTKKKNEKPGAAAEKKEGAAAMVGTT--RSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVDLDQPGRTTKMVRMDDVAYVPGLSQNLVS 279
            +Q    P +AW NL+  +  KG    + L   +     +  +   +++  +   A  L  L D  V +     +++SGL  +Y      LE++   +    I+  +  +     +Q  +++A   S+   T        ++  +K +GKCF CGK GH A +C+   + + K      +K+ +   V  T  ++ + +EW  DSGA+ HM+   + + + KK     +I  A+   L     G  E+ +   G   K++R+++V YVPGL+ NL+S
Sbjct:   73 IQSANTPRQAWENLKNAFEDKGLTRKVGLLRILTSTKFQDCNSVEEYVNMIMTTAHTLKEL-DFEVKDEMIGALLLSGLPDEYRPMIMGLESSGTAITADAIKVKILQEVKHGGKQSTETEAALYSKARATR-------KKSQDKVKGKCFACGKTGHFAAKCRNKARDDNK------EKDSSTHKVFATFAQAGKNDEWYLDSGASTHMTGWSSCLKDMKKCDK--TITAANRGQLKAVAHGVAEIGVTVNGGE-KVIRVENVLYVPGLAANLLS 331          
BLAST of mRNA_F-serratus_M_contig7174.18377.1 vs. uniprot
Match: UPI001F43F645 (hypothetical protein n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F43F645)

HSP 1 Score: 73.9 bits (180), Expect = 3.310e-11
Identity = 50/157 (31.85%), Postives = 80/157 (50.96%), Query Frame = 0
Query:  139 RENGKNRRPSNK-FEGKCFNCGKRGHRAVECKGTKKKNEKPGAAAEKKEGA---------AAMVGTTRSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVDLDQPGRTTKMVRMDDVAYVPGLSQNLVSTVKAVE 285
            R +GK + P+ K F+G C+NCGK GH+A +C+  KK  EK    A   E             MVG  +     EW  DSGAT H+   +   + Y  A P   + + +  T  V+G+GK+ + +     + K++ +++V +VP + +NLVS    V+
Sbjct:  246 RHSGKEKNPNKKKFKGNCYNCGKAGHKAPDCRAPKKDKEKNKGQANMVEDVDDLCAMLSECNMVGNPK-----EWWLDSGATRHVCAVKEAFTTYTPAGPNEELYMGNTATAKVEGYGKVLLKMT----SGKVLTLNNVMHVPSIRKNLVSAALLVK 393          
BLAST of mRNA_F-serratus_M_contig7174.18377.1 vs. uniprot
Match: A0A2G2X5Y1_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2X5Y1_CAPBA)

HSP 1 Score: 72.8 bits (177), Expect = 1.200e-10
Identity = 53/152 (34.87%), Postives = 82/152 (53.95%), Query Frame = 0
Query:  138 NRENGKNRRPSNKFEGKCFNCGKRGHRAVECKGTKKKNEKPGA----AAEKKEGAAAM------VGTTRSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVDLDQPGRTTKMVRMDDVAYVPGLSQNLVS 279
            N E+G N  P  KF+GKCFNCGK GH++ +C+  KK  +K  A    + +  +   AM      VG  R+     W  DSGAT H+  ++   S Y  A    +I +A+  T  V+G GK+ + +     + K++ +++V YVP L +NL+S
Sbjct:   17 NVEHGSNH-PKKKFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDNLCAMFTECNMVGNPRA-----WWMDSGATLHVCASKELFSTYAPAQAEETIYMANSTTAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 158          
BLAST of mRNA_F-serratus_M_contig7174.18377.1 vs. uniprot
Match: A0A2G2VDA6_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VDA6_CAPBA)

HSP 1 Score: 72.0 bits (175), Expect = 2.170e-10
Identity = 53/152 (34.87%), Postives = 82/152 (53.95%), Query Frame = 0
Query:  138 NRENGKNRRPSNKFEGKCFNCGKRGHRAVECKGTKKKNEKPGA----AAEKKEGAAAM------VGTTRSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVDLDQPGRTTKMVRMDDVAYVPGLSQNLVS 279
            N E+G N  P  KF+GKCFNCGK GH++ +C+  KK  +K  A    + +  +   AM      VG  R+     W  DSGAT H+  ++   S Y  A    +I +A+  T  V+G GK+ + +     + K++ +++V YVP L +NL+S
Sbjct:  252 NVEHGSNH-PKKKFKGKCFNCGKIGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATHHVCESKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 393          
BLAST of mRNA_F-serratus_M_contig7174.18377.1 vs. uniprot
Match: A0A6A6N7F6_HEVBR (CCHC-type domain-containing protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6N7F6_HEVBR)

HSP 1 Score: 70.5 bits (171), Expect = 5.840e-10
Identity = 75/300 (25.00%), Postives = 134/300 (44.67%), Query Frame = 0
Query:    3 LEIVQHCQAPNEAWRNLELHYRAKGTREILRLSHEINGKTMEPGSDPFKFMMEVDKLAGDLHRLGDKS-VTELRRCVIIVSGLSADYE---MECRMLENNPDGLNRGEIERVVGNQYNRLLRQQ----QDSKALSASRGTITANRENGKNRRPSNKFEGKCFNCGKRGHRAVECKGTKKKNEKPGAAAEK-------------KEGAAAMVGTTRS--DEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVDLDQPGRTTKMVRMDDVAYVPGLSQNLVS 279
            L+ ++  + P EAW      +  K    +  L  E+     +      ++  +V  L  ++  L  ++ + E R   II+ GL  +Y+      R  +N P  +   E E ++  Q   L++Q     Q  KA +      T++R   KN+    KFEGKC+NCGK+GH A  C  +K++  +  AA  K             +E   A+  TT    D +++W  DSG + HM+  R  + N+ +      + +A+ + LP+     ++  +         V + +V +VPG+ +NL+S
Sbjct:   13 LKHIRDVKTPKEAWDTFAKLFSKKNDTRLQLLKSELLSLA-QSDMKITQYFRKVKSLCREIFELDPQAPMGETRMKRIIIHGLKPEYKGFVAAVRGWQNQPSLV---EFENLLAGQE-ALVKQMGEVSQKGKAKNHQGEGSTSSRGASKNQGKGKKFEGKCYNCGKKGHIAKMC-WSKRRTVESNAATSKSEEEWDAEALFATEEDEIALTATTSDLIDYEKDWIVDSGCSNHMTCDREKLQNFSEYKGSHVVVIANNSKLPI---AHVDNTMVSSQYNATEVPLQNVYHVPGMKKNLLS 303          
BLAST of mRNA_F-serratus_M_contig7174.18377.1 vs. uniprot
Match: A0A2G2V5Q5_CAPBA (Geraniol 8-hydroxylase n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2V5Q5_CAPBA)

HSP 1 Score: 70.5 bits (171), Expect = 6.760e-10
Identity = 53/152 (34.87%), Postives = 82/152 (53.95%), Query Frame = 0
Query:  138 NRENGKNRRPSNKFEGKCFNCGKRGHRAVECKGTKKKNEKPGA----AAEKKEGAAAM------VGTTRSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVDLDQPGRTTKMVRMDDVAYVPGLSQNLVS 279
            N E+G N  P  KF+GKCFNCGK GH++ +C+  KK  +K  A    + +  +   AM      VG  R+     W  DSGAT H+  ++   S Y  A    +I +A+  T  V+G GK+ + +     + K++ +++V YVP L +NL+S
Sbjct:  693 NVEHGSNH-PKKKFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATRHVCASKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 834          
BLAST of mRNA_F-serratus_M_contig7174.18377.1 vs. uniprot
Match: A0A2G2W247_CAPBA (Uncharacterized protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2W247_CAPBA)

HSP 1 Score: 70.5 bits (171), Expect = 7.410e-10
Identity = 53/152 (34.87%), Postives = 82/152 (53.95%), Query Frame = 0
Query:  138 NRENGKNRRPSNKFEGKCFNCGKRGHRAVECKGTKKKNEKPGA----AAEKKEGAAAM------VGTTRSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVDLDQPGRTTKMVRMDDVAYVPGLSQNLVS 279
            N E+G N  P  KF+GKCFNCGK GH++ +C+  KK  +K  A    + +  +   AM      VG  R+     W  DSGAT H+  ++   S Y  A    +I +A+  T  V+G GK+ + +     + K++ +++V YVP L +NL+S
Sbjct:  728 NVEHGSNH-PKKKFKGKCFNCGKVGHKSTDCRAPKKGKKKDQANLIESNKDYDDLCAMFTECNMVGNPRA-----WWMDSGATRHVCASKELFSTYAPAQAEETIYMANSATAKVEGIGKVCLKMT----SGKVLTLNNVLYVPELRRNLIS 869          
BLAST of mRNA_F-serratus_M_contig7174.18377.1 vs. uniprot
Match: H3GP57_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GP57_PHYRM)

HSP 1 Score: 67.4 bits (163), Expect = 6.440e-9
Identity = 76/284 (26.76%), Postives = 125/284 (44.01%), Query Frame = 0
Query:   10 QAPNEAWRNLELHYRAKGTREILRLSHEING--KTMEPGSDPFKFMMEVDKLAGDLHRLGDKSVTELRRCVIIVSGLSADYEMECRMLENNPDGLNRGEIERVVGNQYNRLLRQQ-----QDSKALSASRGTI--TANRENGKNRRPSNKFEGKCFNCGKRGHRAVECKGTKKKNEKPGAAAEKKEGAAAMVGTTRSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNT-LPVDGFGKIEVDLDQPGRTTKMVRMDDVAYVPGLSQNLVSTVKA 283
            ++  EAW  LE  +RA+     L L  + +    TM   S   K + E+++L  ++   G +   E   C  ++  L A YE   +    +   L   ++  +VG      +RQ+     +++ AL A++G    T  ++ G  R+PS    G CFNCGK GH A +C+             E  + +      T     E W  DSGA+ HM  TR    +Y   +   S+  A  +  L V G G +++ +   GR+    R+++  +V  LS+NL S   A
Sbjct:   63 KSAKEAWDKLEKFHRAQDVANRLWLKEKFSSFKYTMSSVS---KHVTELEQLVLEMKSAGCEPSDE-DVCATLLRSLPASYESLVQAFRMSMTEL---KLTDLVGKLIAEEVRQKDSTRIEEATALLANKGYAKDTKKKQQGGRRKPS----GACFNCGKMGHYARDCRSQASPEN------EVLDESNVAFNVTEMFASESWVMDSGASTHMCKTREAFKDYTPMTKSYSVASAKSSAKLKVLGHGTVQLRV-WSGRSWINARLENALHVQDLSKNLFSLTAA 328          
BLAST of mRNA_F-serratus_M_contig7174.18377.1 vs. uniprot
Match: A0A0J8B0L4_BETVV (CCHC-type domain-containing protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J8B0L4_BETVV)

HSP 1 Score: 64.3 bits (155), Expect = 8.970e-9
Identity = 50/140 (35.71%), Postives = 71/140 (50.71%), Query Frame = 0
Query:  146 RPSNKFEGKCFNCGKRGHRAVECKGTKKKNEKPGAAAEKKEGAAAMVGTTRSDEKEEW---ES---DSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEVDLDQPGRTTKMVRMDDVAYVPGLSQNLVS 279
            +P  +  G+CFNCGKRGH A +C+  KKK E           +   +     D++E +   ES   DSGA+ HM+  +  +SN+ +      I  ADG T+   G G ++V     GR  K V + DV YVP L  NL+S
Sbjct:   57 KPKRQPRGRCFNCGKRGHFAKDCRSPKKKEESS---------STDELAFVAGDQEELYAVAESCYVDSGASRHMTGNKGLLSNFVELLDAVKIVTADGRTICGIGTGDMKV-----GRG-KTVTLKDVLYVPDLKMNLLS 181          
BLAST of mRNA_F-serratus_M_contig7174.18377.1 vs. uniprot
Match: H3H7C1_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7C1_PHYRM)

HSP 1 Score: 65.1 bits (157), Expect = 2.240e-8
Identity = 71/275 (25.82%), Postives = 122/275 (44.36%), Query Frame = 0
Query:   14 EAWRNLELHYRAKGTREILRLSHEINGKTMEPGSDPFKFMMEVDKLAGDLHRLGDKSVTELRRCVIIVSGLSADYEMECRMLENNPDGLNRGE-IERVVGNQYNRLLRQQ-QDSKALSASRGTI--TANRENGKNRRPSNKFEGKCFNCGKRGHRAVECKGTKKKNEKPGAAAEKKEGAAAMVGTTRSDEKEEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNT-LPVDGFGKIEVDLDQPGRTTKMVRMDDVAYVPGLSQNLVSTVKA 283
            EAW  LE  +RA+     L L  + +       S   K + E+++L  ++   G +   E   C  ++  L A YE   +    +   L   + +++++  +  +    + +++ AL A++G    T  ++ G  R+PS    G CFNCGK GH A +C+       K     E  + +      T     E W  DSGA+ HM  TR    N+   +   S+  A  +  L V G G +++ +   GR+    R+++  +V  LS+NL S   A
Sbjct:    1 EAWDKLEKFHRAQDVANRLWLKEKFSSFKYTTSSVS-KHVTELEQLVLEMKSAGCEPSDE-DVCATLLRSLPASYESLVQAFRMSMTELKLTDLVDKLIAEEVRQKDSTRIEEATALLANKGYAKDTKKKQQGGRRKPS----GACFNCGKMGHYARDCR------SKASPENEVLDESNVAFNVTEMFASESWVMDSGASTHMCKTREAFKNHTPMTKSYSVASAKSSAKLKVLGHGTVQLRV-WSGRSWINARLENALHVQDLSKNLFSLTAA 262          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7174.18377.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0J7KAH3_LASNI5.530e-1224.64Retrovirus-related pol polyprotein from transposon... [more]
UPI001F43F6453.310e-1131.85hypothetical protein n=1 Tax=Corynebacterium parak... [more]
A0A2G2X5Y1_CAPBA1.200e-1034.87Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
A0A2G2VDA6_CAPBA2.170e-1034.87Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
A0A6A6N7F6_HEVBR5.840e-1025.00CCHC-type domain-containing protein n=1 Tax=Hevea ... [more]
A0A2G2V5Q5_CAPBA6.760e-1034.87Geraniol 8-hydroxylase n=1 Tax=Capsicum baccatum T... [more]
A0A2G2W247_CAPBA7.410e-1034.87Uncharacterized protein n=1 Tax=Capsicum baccatum ... [more]
H3GP57_PHYRM6.440e-926.76Uncharacterized protein n=3 Tax=Phytophthora ramor... [more]
A0A0J8B0L4_BETVV8.970e-935.71CCHC-type domain-containing protein (Fragment) n=1... [more]
H3H7C1_PHYRM2.240e-825.82CCHC-type domain-containing protein n=1 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 154..170
e-value: 0.0036
score: 26.3
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 153..169
e-value: 3.3E-5
score: 23.8
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 154..169
score: 10.098
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 3..103
e-value: 3.5E-10
score: 39.7
NoneNo IPR availableGENE3D4.10.60.10coord: 134..184
e-value: 1.2E-5
score: 27.1
NoneNo IPR availablePANTHERPTHR34676:SF1coord: 124..281
NoneNo IPR availablePANTHERPTHR34676FAMILY NOT NAMEDcoord: 124..281
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 138..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7174contigF-serratus_M_contig7174:4729..5757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7174.18377.1mRNA_F-serratus_M_contig7174.18377.1Fucus serratus malemRNAF-serratus_M_contig7174 4729..5757 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig7174.18377.1 ID=prot_F-serratus_M_contig7174.18377.1|Name=mRNA_F-serratus_M_contig7174.18377.1|organism=Fucus serratus male|type=polypeptide|length=286bp
MALEIVQHCQAPNEAWRNLELHYRAKGTREILRLSHEINGKTMEPGSDPF
KFMMEVDKLAGDLHRLGDKSVTELRRCVIIVSGLSADYEMECRMLENNPD
GLNRGEIERVVGNQYNRLLRQQQDSKALSASRGTITANRENGKNRRPSNK
FEGKCFNCGKRGHRAVECKGTKKKNEKPGAAAEKKEGAAAMVGTTRSDEK
EEWESDSGATFHMSHTRAGMSNYKKASPGTSIKVADGNTLPVDGFGKIEV
DLDQPGRTTKMVRMDDVAYVPGLSQNLVSTVKAVEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf