prot_F-serratus_M_contig7150.18367.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig7150.18367.1
Unique Name	prot_F-serratus_M_contig7150.18367.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	113

Homology

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BLAST of mRNA_F-serratus_M_contig7150.18367.1 vs. uniprot
Match: A0A5N6NZN2_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NZN2_9ASTR)

HSP 1 Score: 90.9 bits (224), Expect = 5.650e-19
Identity = 49/112 (43.75%), Postives = 69/112 (61.61%), Query Frame = 0

Query:    1 DITGPFHATSLGGNRNAMLHVDDFTQFKVIHFLKHKSDAAKELHKLVAEHIGPSGIKIGTVRTDRGGDFKG-EFQSLQEELGIKRKTAPPYTPQYNGVVERVLGLLRNNTVI 111
            D+ GP   +++GGN+   L VDD++++  ++ LK K++A     K  A     S +K+GT+RTDRGG+F   EF    E+ GIKR+   PYTPQ NGVVER     RN TV+
Sbjct:  534 DLCGPITPSTMGGNKFFFLLVDDYSRYMWVYLLKSKNEAFLNFKKFKATVEKESELKVGTLRTDRGGEFVSKEFLQFCEDHGIKRQLTAPYTPQQNGVVER-----RNRTVM 640

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BLAST of mRNA_F-serratus_M_contig7150.18367.1 vs. uniprot
Match: A0A6H5JTI6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI6_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.300e-17
Identity = 44/111 (39.64%), Postives = 72/111 (64.86%), Query Frame = 0

Query:    1 DITGPFHATSLGGNRNAMLHVDDFTQFKVIHFLKHKSDAAKELHKLVAEHIG---PSGIKIGTVRTDRGGDF-KGEFQSLQEELGIKRKTAPPYTPQYNGVVERVLGLLRN 107
            D++G     SLGG    ++  DD+T++  ++FLKHKSDAA+   + +AE+     PS + +  VR+D GG+F +GEF  +  +  IK++  P ++P+YNGV ER LGL+++
Sbjct:  739 DLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKD 847

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BLAST of mRNA_F-serratus_M_contig7150.18367.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.310e-17
Identity = 44/111 (39.64%), Postives = 72/111 (64.86%), Query Frame = 0

Query:    1 DITGPFHATSLGGNRNAMLHVDDFTQFKVIHFLKHKSDAAKELHKLVAEHIG---PSGIKIGTVRTDRGGDF-KGEFQSLQEELGIKRKTAPPYTPQYNGVVERVLGLLRN 107
            D++G     SLGG    ++  DD+T++  ++FLKHKSDAA+   + +AE+     PS + +  VR+D GG+F +GEF  +  +  IK++  P ++P+YNGV ER LGL+++
Sbjct:  574 DLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKD 682

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BLAST of mRNA_F-serratus_M_contig7150.18367.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.310e-17
Identity = 44/111 (39.64%), Postives = 72/111 (64.86%), Query Frame = 0

Query:    1 DITGPFHATSLGGNRNAMLHVDDFTQFKVIHFLKHKSDAAKELHKLVAEHIG---PSGIKIGTVRTDRGGDF-KGEFQSLQEELGIKRKTAPPYTPQYNGVVERVLGLLRN 107
            D++G     SLGG    ++  DD+T++  ++FLKHKSDAA+   + +AE+     PS + +  VR+D GG+F +GEF  +  +  IK++  P ++P+YNGV ER LGL+++
Sbjct:  587 DLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKD 695

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BLAST of mRNA_F-serratus_M_contig7150.18367.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 3.320e-17
Identity = 44/111 (39.64%), Postives = 72/111 (64.86%), Query Frame = 0

Query:    1 DITGPFHATSLGGNRNAMLHVDDFTQFKVIHFLKHKSDAAKELHKLVAEHIG---PSGIKIGTVRTDRGGDF-KGEFQSLQEELGIKRKTAPPYTPQYNGVVERVLGLLRN 107
            D++G     SLGG    ++  DD+T++  ++FLKHKSDAA+   + +AE+     PS + +  VR+D GG+F +GEF  +  +  IK++  P ++P+YNGV ER LGL+++
Sbjct:  730 DLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKD 838

[Close]

BLAST of mRNA_F-serratus_M_contig7150.18367.1 vs. uniprot
Match: A0A5N6P097_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P097_9ASTR)

HSP 1 Score: 85.5 bits (210), Expect = 4.150e-17
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 0

Query:    1 DITGPFHATSLGGNRNAMLHVDDFTQFKVIHFLKHKSDAAKELHKLVAEHIGPSGIKIGTVRTDRGGDFKG-EFQSLQEELGIKRKTAPPYTPQYNGVVERVLGLLRNNTVI 111
            D+ GP   + +GGN+   L VDD++++  ++ LK K +A     K  A     +  K+GT+RTDRGG+F   EF    E+ GIKR+   PYTPQ NGVVER     RN T++
Sbjct:  221 DLCGPITPSIMGGNKFFFLLVDDYSRYMWVYLLKSKDEAFLNFKKFKATVEKENEHKVGTLRTDRGGEFGSKEFFQFCEDHGIKRQLTAPYTPQQNGVVER-----RNRTIM 327

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BLAST of mRNA_F-serratus_M_contig7150.18367.1 vs. uniprot
Match: A0A6H5KUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUV5_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.540e-16
Identity = 44/111 (39.64%), Postives = 72/111 (64.86%), Query Frame = 0

Query:    1 DITGPFHATSLGGNRNAMLHVDDFTQFKVIHFLKHKSDAAKELHKLVAEHIG---PSGIKIGTVRTDRGGDF-KGEFQSLQEELGIKRKTAPPYTPQYNGVVERVLGLLRN 107
            D++G   A SLGG    ++  DDFT++  ++FLKHKSDAA+   + +AE+     PS + +  VR+D GG+F  GEF  +  +  IK++ +P ++P+YNGV +R L L+++
Sbjct:  195 DLSGKTRAQSLGGKWYTLIVKDDFTRWNRVYFLKHKSDAAEAFERYLAENRADGAPSDVMV--VRSDNGGEFFYGEFGRVCRKYCIKQEFSPAHSPEYNGVADRALDLIKD 303

[Close]

BLAST of mRNA_F-serratus_M_contig7150.18367.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 2.100e-16
Identity = 43/114 (37.72%), Postives = 72/114 (63.16%), Query Frame = 0

Query:    1 DITGPFHATSLGGNRNAMLHVDDFTQFKVIHFLKHKSDAAKELHKLVAEHIG---PSGIKIGTVRTDRGGDF-KGEFQSLQEELGIKRKTAPPYTPQYNGVVERVLGLLRNNTV 110
            +++G   A SLGG    ++  DD+T++  ++FLKHKSDAA+   + + E      PS + +  VR+D GG+F +GEF  +  +  IK++  P ++P+YNGV ER LGL+++  +
Sbjct:  372 ELSGKARAQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLKEKRADGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAAI 483

[Close]

BLAST of mRNA_F-serratus_M_contig7150.18367.1 vs. uniprot
Match: A0A6H5K2B9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2B9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 3.810e-16
Identity = 43/115 (37.39%), Postives = 73/115 (63.48%), Query Frame = 0

Query:    1 DITGPFHATSLGGNRNAMLHVDDFTQFKVIHFLKHKSDAAKELHKLVAEHIG---PSGIKIGTVRTDRGGDF-KGEFQSLQEELGIKRKTAPPYTPQYNGVVERVLGLLRNNTVI 111
            D++G     S GG    ++  D +T++  ++FLKHKSDAA+   + +AE+     PS + +  VR+D GG+F +GEF  +  +  IK++  P ++P+YNGV ERVLGL+++  ++
Sbjct:  346 DLSGKAGVQSFGGKWYTLIVKDGYTRWSHVYFLKHKSDAAEAFERYLAENRADGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERVLGLIKDAELV 458

[Close]

BLAST of mRNA_F-serratus_M_contig7150.18367.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 5.380e-16
Identity = 47/108 (43.52%), Postives = 64/108 (59.26%), Query Frame = 0

Query:    1 DITGPFHATSLGGNRNAMLHVDDFTQFKVIHFLKHKSDAAKELHKLVAEHIGPSGIK--IGTVRTDRGGDF-KGEFQSLQEELGIKRKTAPPYTPQYNGVVERVLGLL 105
            D+ G     S+GG    M+  DDFT+   ++FLKHKSDA       +A  +   G+   +  VR+D GG+F  GEF S+  EL IK++  P Y+PQYNGV ER LGL+
Sbjct:  240 DLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLAS-VRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLI 346

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig7150.18367.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig7150.18367.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A5N6NZN2_9ASTR	5.650e-19	43.75	Uncharacterized protein n=1 Tax=Mikania micrantha ...	[more]
A0A6H5JTI6_9PHAE	3.300e-17	39.64	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JZQ8_9PHAE	3.310e-17	39.64	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JN00_9PHAE	3.310e-17	39.64	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KF60_9PHAE	3.320e-17	39.64	Uncharacterized protein n=12 Tax=Ectocarpus sp. CC...	[more]
A0A5N6P097_9ASTR	4.150e-17	41.96	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KUV5_9PHAE	1.540e-16	39.64	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K1N9_9PHAE	2.100e-16	37.72	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5K2B9_9PHAE	3.810e-16	37.39	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5JBA7_9PHAE	5.380e-16	43.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 11..107 e-value: 1.4E-14 score: 54.3
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 1..113 score: 16.239
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..110 e-value: 1.6E-18 score: 68.7
None	No IPR available	PANTHER	PTHR11439:SF263		coord: 1..100
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 1..100
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 1..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig7150	contig	F-serratus_M_contig7150:13558..13896 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig7150.18367.1	mRNA_F-serratus_M_contig7150.18367.1	Fucus serratus male	mRNA	F-serratus_M_contig7150 13558..13896 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig7150.18367.1 ID=prot_F-serratus_M_contig7150.18367.1|Name=mRNA_F-serratus_M_contig7150.18367.1|organism=Fucus serratus male|type=polypeptide|length=113bp
DITGPFHATSLGGNRNAMLHVDDFTQFKVIHFLKHKSDAAKELHKLVAEH
IGPSGIKIGTVRTDRGGDFKGEFQSLQEELGIKRKTAPPYTPQYNGVVER
VLGLLRNNTVILL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001584	Integrase_cat-core
IPR036397	RNaseH_sf
IPR039537	Retrotran_Ty1/copia-like
IPR012337	RNaseH-like_sf