prot_F-serratus_M_contig715.18361.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig715.18361.1
Unique Name	prot_F-serratus_M_contig715.18361.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	303

Homology

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BLAST of mRNA_F-serratus_M_contig715.18361.1 vs. uniprot
Match: D8LD29_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD29_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 5.200e-60
Identity = 146/300 (48.67%), Postives = 179/300 (59.67%), Query Frame = 0

Query:    7 AEAGGERLRLAVKAYRDAYLAVKLSQVRRAVLGPPGGDAKAVGLLAEMESEEWGEGLLTESNRSGEASTAYQVGNNSLKCLCLLRKVRSLFPGGNRR--EVFSPNVALVLKSSSDRGIASEGAARYG---GMLQNLAGGREGGMKXXXXXXXXXXXXXXXXXXXXXXXXXAGSVPDKDQMVKMAKKMSLVVKKQLREPGTQHLVCSFLRKAEPDTVKSLAEAVGVP-VNEGLATKVSKYLKGADGKTLESWIDLGEIAAGVFRRLSQLYVLWSRGIALAGVWLVWVWLRACFAPILLTEA 300
            A AG    RLA +AYRDAYL+V+LS    A  GP  GDAKA+GL+AEME+ +WG+G LTE++RS   S A    +  L  L  +       P G+    ++F              G             G++  +  G      XXXXXXXXXXXX   XXX           PD  QM+KMAKKMS  VKKQLR PGTQ +VC+FL +A+P+T+ SLA   G P  NE +   +S YL+ ADGKTLESWID GEIA   FRRL Q  VLWSRGIALAG+WLVWVW+RACFAPI++ +A
Sbjct:  144 AGAGAAGSRLAQRAYRDAYLSVELSNDGGAA-GPAAGDAKALGLMAEMEAGDWGQGWLTEADRSAARSKA----DKHLTALASMAPPARSTPAGSGGLFDMFGGGXXXXXXXXXXXGXXXXXXXXLXXXPGLMDMMGAGTGXXXXXXXXXXXXXXXXLMGXXXAKSGLGGGADGPDPKQMLKMAKKMSKGVKKQLRNPGTQQMVCAFLNQAKPETLMSLATTAGFPGANEAIVNGLSGYLQKADGKTLESWIDYGEIATCAFRRLKQFSVLWSRGIALAGIWLVWVWVRACFAPIVVQKA 438

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig715.18361.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig715.18361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LD29_ECTSI	5.200e-60	48.67	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 289..302
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 268..288
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..267
None	No IPR available	TMHMM	TMhelix		coord: 270..292

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig715	contig	F-serratus_M_contig715:82567..99650 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig715.18361.1	mRNA_F-serratus_M_contig715.18361.1	Fucus serratus male	mRNA	F-serratus_M_contig715 82419..101817 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig715.18361.1 ID=prot_F-serratus_M_contig715.18361.1|Name=mRNA_F-serratus_M_contig715.18361.1|organism=Fucus serratus male|type=polypeptide|length=303bp
METDKKAEAGGERLRLAVKAYRDAYLAVKLSQVRRAVLGPPGGDAKAVGL
LAEMESEEWGEGLLTESNRSGEASTAYQVGNNSLKCLCLLRKVRSLFPGG
NRREVFSPNVALVLKSSSDRGIASEGAARYGGMLQNLAGGREGGMKGGGT
AAGGGMMEALVSGAGGALGGGAGSVPDKDQMVKMAKKMSLVVKKQLREPG
TQHLVCSFLRKAEPDTVKSLAEAVGVPVNEGLATKVSKYLKGADGKTLES
WIDLGEIAAGVFRRLSQLYVLWSRGIALAGVWLVWVWLRACFAPILLTEA
KA*