mRNA_F-serratus_M_contig7136.18347.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7136.18347.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE) HSP 1 Score: 117 bits (292), Expect = 3.270e-26 Identity = 63/101 (62.38%), Postives = 70/101 (69.31%), Query Frame = 1
Query: 1 EEAEPLYKHSLANDEKVYGPDHPEVATDLNNWARLFK-------------TLPYTNPLLLSQGKFPEAEPLYERSQAILEKALGPEHPDVAQSLNNRALLL 264
+EAEPLYK SLA DEKVYGPDHP+VAT LNNW RL TL P L+ QGK+ +A PLY+RS AILEK GP+HPDVAQSLNNRA LL
Sbjct: 355 DEAEPLYKRSLAIDEKVYGPDHPDVATALNNWVRLLSICSSALKYLLALTTLLPVVPFLIFQGKYDQAGPLYDRSLAILEKVHGPDHPDVAQSLNNRAELL 455
BLAST of mRNA_F-serratus_M_contig7136.18347.1 vs. uniprot
Match: D7G180_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G180_ECTSI) HSP 1 Score: 95.5 bits (236), Expect = 1.450e-19 Identity = 58/109 (53.21%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 1 EEAEPLYKHSLANDEKVYGPDHPEVATDLNNWARLFKTL----------------PYTNPLLL-----SQGKFPEAEPLYERSQAILEKALGPEHPDVAQSLNNRALLL 264
EEAEPLY+ SLA DE+VYGPDHPEVATDLNN A L +T P T+ L L +QGK+ EAEPL+ RS AI E+ GP+HP+VA L+N A LL
Sbjct: 85 EEAEPLYRRSLAIDEEVYGPDHPEVATDLNNLAGLLETQIMTSVVRQSHSVNSHEPSTDVLGLRQPDVAQGKYEEAEPLHRRSLAIDEEVYGPDHPNVATGLSNLAGLL 193
BLAST of mRNA_F-serratus_M_contig7136.18347.1 vs. uniprot
Match: A0A6H5J9V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9V8_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 7.220e-19 Identity = 50/93 (53.76%), Postives = 63/93 (67.74%), Query Frame = 1
Query: 1 EEAEPLYKHSLANDEKVYGPDHPEVATDLNNWARLFKTLPYTNPLLLS-----QGKFPEAEPLYERSQAILEKALGPEHPDVAQSLNNRALLL 264
EEAE +Y+HS++ +K +GPDHPE+AT LNNWA L + + L+ QGK+ AEPLY RS AI EK GP+HP+VA SLNNRA L
Sbjct: 342 EEAETIYRHSMSILKKTHGPDHPEIATGLNNWAGLLSSQHHEANFSLAFRVPCQGKYDAAEPLYVRSLAIREKVYGPDHPEVATSLNNRAEFL 434
BLAST of mRNA_F-serratus_M_contig7136.18347.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 1.030e-17 Identity = 54/92 (58.70%), Postives = 63/92 (68.48%), Query Frame = 1
Query: 4 EAEPLYKHSLANDEKVYGPDHPEVATDLNNWARLFKTLPY----TNPLLLS-QGKFPEAEPLYERSQAILEKALGPEHPDVAQSLNNRALLL 264
EAE LYK SL+ DEKVYGPDHPEVA DLNN A L ++ ++ L S GK EA PL+ +S I EK LGPEHPDVA+SLNN A +L
Sbjct: 11 EAESLYKRSLSIDEKVYGPDHPEVAADLNNMAVLMESQARRWGSSDKFLGSTSGKCVEAVPLHRQSLGIREKTLGPEHPDVAESLNNLAGVL 102
BLAST of mRNA_F-serratus_M_contig7136.18347.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 2.210e-17 Identity = 52/97 (53.61%), Postives = 64/97 (65.98%), Query Frame = 1
Query: 4 EAEPLYKHSLANDEKVYGPDHPEVATDLNNWARLFKTLP----------YTNPLLLS-QGKFPEAEPLYERSQAILEKALGPEHPDVAQSLNNRALL 261
EAEPLY+ + E GP+HP++AT LNN A L +P T+ + ++ QGK+ EA PLYERS AI EK LGP+HPDVAQSLNNRALL
Sbjct: 740 EAEPLYRRATEIWETALGPEHPQMATALNNRAGLLSNVPPHSLSSFHSSNTHHVFITFQGKYEEAGPLYERSLAIREKVLGPDHPDVAQSLNNRALL 836
BLAST of mRNA_F-serratus_M_contig7136.18347.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 5.700e-17 Identity = 56/108 (51.85%), Postives = 64/108 (59.26%), Query Frame = 1
Query: 1 EEAEPLYKHSLANDEKVYGPDHPEVATDLNNWARLFKT--------------------LPYTNPLLLSQGKFPEAEPLYERSQAILEKALGPEHPDVAQSLNNRALLL 264
+EA LY+ SLA EK GPDHP+VA LNNWA L ++ L LL +QGK+ EA L ERS AI EKALGP+HPDVAQSLNN ALLL
Sbjct: 287 DEAGKLYERSLAIREKALGPDHPDVAQSLNNWALLLESQVRAIRIPGSFLWYPIHSGVLNNRALLLKAQGKYDEAGKLCERSLAIREKALGPDHPDVAQSLNNWALLL 394
BLAST of mRNA_F-serratus_M_contig7136.18347.1 vs. uniprot
Match: A0A6H5KWM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM2_9PHAE) HSP 1 Score: 83.2 bits (204), Expect = 7.340e-15 Identity = 59/148 (39.86%), Postives = 66/148 (44.59%), Query Frame = 1
Query: 4 EAEPLYKHSLANDEKVYGPDHPEVATDLNNWARL---------------------------------------------------------FKTLPYT----NPLLLSQGKFPEAEPLYERSQAILEKALGPEHPDVAQSLNNRALLL 264
EAE LYK SLA DEKVYGP HPEVA DLNNW F LPY+ +PL QG + +A LY+RS AI EK LGP+HP+VAQSLNNRA LL
Sbjct: 21 EAESLYKRSLAIDEKVYGPHHPEVAKDLNNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAQNVPPGGVVEHSFIRLPYSAHSFHPLHHIQGNYDQAGMLYKRSLAIREKVLGPDHPNVAQSLNNRAGLL 168
BLAST of mRNA_F-serratus_M_contig7136.18347.1 vs. uniprot
Match: A0A6H5JIH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH9_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 3.300e-14 Identity = 49/88 (55.68%), Postives = 60/88 (68.18%), Query Frame = 1
Query: 4 EAEPLYKHSLANDEKVYGPDHPEVATDLNNWARLFKT-LPYTNPLLLSQGKFPEAEPLYERSQAILEKALGPEHPDVAQSLNNRALLL 264
EAEPL++ S A EKV P++PEVAT L A K LP+ + QGK EAEPL+ERSQAI EK LGPE+P+VA L NRAL++
Sbjct: 1814 EAEPLHERSQAIREKVLDPENPEVATVLKTRACSAKMYLPWLSVRTACQGKGEEAEPLHERSQAIREKVLGPENPEVATVLKNRALMV 1901
BLAST of mRNA_F-serratus_M_contig7136.18347.1 vs. uniprot
Match: A0A6H5JUC1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC1_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 4.640e-14 Identity = 48/91 (52.75%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 31 LANDEKVYGPDHPEVATDLNNWARL----FKTLPYTNPLLLS---------QGKFPEAEPLYERSQAILEKALGPEHPDVAQSLNNRALLL 264
+A EKV GP+HP+VA LNN A L F T+P+T L QGK+ EAEPLY+R QA+ KALGPEHP +A +LNNRA LL
Sbjct: 135 MAIREKVLGPEHPDVAASLNNRAGLLRKCFSTIPFTIFTLKHDSSRYPHCIQGKYSEAEPLYDRCQAMKGKALGPEHPSLAATLNNRAELL 225
BLAST of mRNA_F-serratus_M_contig7136.18347.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 8.100e-14 Identity = 60/154 (38.96%), Postives = 66/154 (42.86%), Query Frame = 1
Query: 1 EEAEPLYKHSLANDEKVYGPDHPEVATDLNNWARL-------------------------------------------------------------FKT-----LPYTNPLLLSQGKFPEAEPLYERSQAILEKALGPEHPDVAQSLNNRALLL 264
EEAEPLY SLA DEKVYGPDH EVA DLNN A L F T + N + QG + EA+PLYERSQAI +K LGP+HPDVA LNNRA LL
Sbjct: 91 EEAEPLYMLSLAIDEKVYGPDHLEVAEDLNNCAGLLSIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLESQALNKRVGVEGKCLCLFATSYRPHFVWLNYEYICQGNYAEAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGLL 244 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7136.18347.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7136.18347.1 >prot_F-serratus_M_contig7136.18347.1 ID=prot_F-serratus_M_contig7136.18347.1|Name=mRNA_F-serratus_M_contig7136.18347.1|organism=Fucus serratus male|type=polypeptide|length=262bp EEAEPLYKHSLANDEKVYGPDHPEVATDLNNWARLFKTLPYTNPLLLSQGback to top mRNA from alignment at F-serratus_M_contig7136:9945..11694- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7136.18347.1 ID=mRNA_F-serratus_M_contig7136.18347.1|Name=mRNA_F-serratus_M_contig7136.18347.1|organism=Fucus serratus male|type=mRNA|length=1750bp|location=Sequence derived from alignment at F-serratus_M_contig7136:9945..11694- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7136:9945..11694- >mRNA_F-serratus_M_contig7136.18347.1 ID=mRNA_F-serratus_M_contig7136.18347.1|Name=mRNA_F-serratus_M_contig7136.18347.1|organism=Fucus serratus male|type=CDS|length=1572bp|location=Sequence derived from alignment at F-serratus_M_contig7136:9945..11694- (Fucus serratus male)back to top |