mRNA_F-serratus_M_contig7130.18345.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig7130.18345.1 vs. uniprot
Match: A0A6H5L481_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L481_9PHAE) HSP 1 Score: 166 bits (419), Expect = 1.500e-44 Identity = 125/284 (44.01%), Postives = 164/284 (57.75%), Query Frame = 1
Query: 4 YVQGQPEGNLPSGQSGNDAIDNLLDGLYAKTPGSPDNPVEVNLVEEALSRGDDETDNDAGGRGDGREQXXXXXXGEISQENVEDDAAKKHKGGVDEVEGETEDIKQEPREDGAGSSK-----PPDD----DAPQYPKRSPNWLREYLLIFCLIGRPSASEDTDLRTARKTSGPPKRKEKRKSGSVSP----------NVEDSGTDSGGAGSGGNLDSTAIRTFTGAGEGQSRAQVKREIAAVGKNVAQEHHRQKRLAYTEKMVDAVQTLSKAVAAKQRLEAEAA 798
YV+GQP GNLPSGQ+G+DAI+NLLDGLY+KT GS ++PV+ + + E+ D G+ +E + A + K + +G+T IK+E D +S P +D D +YP R W+ LLI+C IGRPS SED DL TARKTSGPPKR KRKS + +S T+ GG GS GNL STAIRTF GAGE QSRAQV+++ A V A E RQKRLA +++ AV+TL+ +VAA++ L+ EAA
Sbjct: 142 YVKGQPGGNLPSGQTGDDAINNLLDGLYSKTKGSAESPVQEDDLVESTPAAD---------------------GGKAPEEKADGGAPNEDKPDQEGEKGKTAVIKKERNPDDDDASVXXXXVPSEDEQAGDDGEYPPRPDGWMHPLLLIYCFIGRPSDSEDPDLATARKTSGPPKRGSKRKSXXXXXXXXXXXXXXXSTGESETEPGGVGSDGNLTSTAIRTFAGAGEPQSRAQVQKQQAEVKSKAANEAFRQKRLAQGDQITKAVKTLADSVAARRVLDEEAA 404
BLAST of mRNA_F-serratus_M_contig7130.18345.1 vs. uniprot
Match: D7FSK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK1_ECTSI) HSP 1 Score: 152 bits (383), Expect = 1.000e-40 Identity = 120/273 (43.96%), Postives = 158/273 (57.88%), Query Frame = 1
Query: 1 SYVQGQPEGNLPSGQSGNDAIDNLLDGLYAKTPGSPDNPVEVNLVEEALSRGDDETDNDAGGRGDGREQXXXXXXGEISQENVEDDA-AKKHKGGVDEVEGETEDIKQEPR--EDGAGSSKPPDDDAPQ---YPKRSPNWLREYLLIFCLIGRPSASEDTDLRTARKTSGPPKRKEKRKSGSVSPNVED-SGTDSGGAGSGGNLDSTAIRTFTGAGEGQSRAQVKREIAAVGKNVAQEHHRQKRLAYTEKMVDAVQTLSKAVAAKQRLEAEAA 798
S V+GQP NLPSG+ DA+D LL+G+Y + G+ ++P+E+ + DD+ DNDA G Q GE VED A++ +GG V G IK+EP G+G P D+ YP R W+ YLL +CLIGRPS+SED DLRT RKTSGP R K+KS SP D SG+++ GA + +L S AIR F GAGE +SRAQVK+E AV AQE R+ + +T K+V AV+ S AV ++Q L+ EAA
Sbjct: 14 SLVEGQPGENLPSGEQEGDALDYLLNGVYHLSTGNAEDPIELEDI-------DDDLDNDADDGGAAGLQDNGRNDGESPPGQVEDGGGAEESEGGAPAVGG----IKEEPAVGNQGSGDGAPSDNIEEADGGYPDRPDKWMHPYLLTYCLIGRPSSSEDPDLRTTRKTSGPKGRGGKQKSKRGSPGTSDESGSETSGAYTDVDLSSNAIRMFAGAGESRSRAQVKKEHEAVAAANAQEQARRVQQTHTGKLVTAVEAWSAAVVSRQALDEEAA 275
BLAST of mRNA_F-serratus_M_contig7130.18345.1 vs. uniprot
Match: A0A6H5JWP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWP9_9PHAE) HSP 1 Score: 122 bits (305), Expect = 9.500e-30 Identity = 107/268 (39.93%), Postives = 139/268 (51.87%), Query Frame = 1
Query: 1 SYVQGQPEGNLPSGQSGNDAIDNLLDGLYAKTPG-SPDNPVEVNLVEEALSRGDDETDNDAGGRGDGREQXXXXXXGEISQENVEDDAAKKHKGGVDEVEGETEDIKQEPREDGAGSSKPPDDDAPQYPKRSPNWLREYLLIFCLIGRPSASEDTDLRTARKTSGPPKRKEKRKSGSVSPNVED-SGTDSGGAGSGGNLDSTAIRTFTGAGEGQSRAQVKREIAAVGKNVAQEHHRQKRLAYTEKMVDAVQTLSKAVAAKQRLEAEAA 798
S+V+GQP GNLPSG+ DA+D L+G G SP +E A G G +E+ G+ ED ++EV+G YP RS W+ YLL +CLIGRPS+SED DLRTARKTSGP R K+K+ SP+ D SG+++ GA + L S+AIRTF GA E QSRAQVK E AV AQE R+ + A+T K+V AV+ LS AV ++Q L+ +AA
Sbjct: 8 SFVEGQPGGNLPSGEQEEDALDYPLNGDNGGNDGESPPGQLEDGXXXXXXXXX-------APGVGGIKEEPAVGNQGDGDGAPSED---------IEEVDG-------------------------GYPDRSNKWMHPYLLTYCLIGRPSSSEDPDLRTARKTSGPKGRAGKQKAQKESPSTSDGSGSETSGAYTEVGLSSSAIRTFAGADEIQSRAQVKNEHTAVAAANAQEQARRVQQAHTGKLVTAVEALSAAVVSRQALDEDAA 234
BLAST of mRNA_F-serratus_M_contig7130.18345.1 vs. uniprot
Match: A0A6H5KXV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXV2_9PHAE) HSP 1 Score: 110 bits (274), Expect = 3.990e-25 Identity = 77/144 (53.47%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 379 YPKRSPNWLREYLLIFCLIGRPSASEDTDLRTARKTSGPPKRKEKRKSGSVSPNVED-SGTDSGGAGSGGNLDSTAIRTFTGAGEGQSRAQVKREIAAVGKNVAQEHHRQKRL---AYTEKMVDAVQTLSKAVAAKQRLEAEAA 798
YP R W+ YLL CL+GRPS+SED DLRTARKTSGP R K+K+ SP+ D SG+++ GA + +L S+AIR F G GE QSRAQVK+E AAV AQE Q R A+T K+V AV+ LS AV ++Q L+ EAA
Sbjct: 119 YPDRPNKWMHPYLLTCCLVGRPSSSEDPDLRTARKTSGPKGRGGKQKAKKGSPSTSDGSGSETSGAYTEVDLSSSAIRMFAGGGEIQSRAQVKKEHAAVAAANAQEQAEQARRVQQAHTGKLVTAVEALSAAVVSRQALDEEAA 262
BLAST of mRNA_F-serratus_M_contig7130.18345.1 vs. uniprot
Match: A0A6H5JU95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU95_9PHAE) HSP 1 Score: 104 bits (260), Expect = 6.050e-24 Identity = 73/133 (54.89%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 403 LREYLLIFCLIGRPSASEDTDLRTARKTSGPPKRKEKRKSGSVSPNVED-SGTDSGGAGSGGNLDSTAIRTFTGAGEGQSRAQVKREIAAVGKNVAQEHHRQKRLAYTEKMVDAVQTLSKAVAAKQRLEAEAA 798
+ YLL +CLIGRPS+SED DLRTARKTSGP R K+K+ SP+ D SG+++ GA + +L S+AIR F GAGE QSRAQVK+E AAV AQE R+ + A+T +V AV LS AV ++Q L+ EAA
Sbjct: 1 MHPYLLTYCLIGRPSSSEDPDLRTARKTSGPKGRGGKQKAKKGSPSTSDGSGSETSGAYTDVDLSSSAIRMFAGAGEVQSRAQVKKEHAAVAAANAQEQARRVQQAHTVFLVTAVGALSAAVVSRQALDEEAA 133
BLAST of mRNA_F-serratus_M_contig7130.18345.1 vs. uniprot
Match: A0A6H5K3M7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3M7_9PHAE) HSP 1 Score: 105 bits (263), Expect = 2.640e-23 Identity = 73/133 (54.89%), Postives = 94/133 (70.68%), Query Frame = 1
Query: 403 LREYLLIFCLIGRPSASEDTDLRTARKTSGPPKRKEKRKSGSVSPNVED-SGTDSGGAGSGGNLDSTAIRTFTGAGEGQSRAQVKREIAAVGKNVAQEHHRQKRLAYTEKMVDAVQTLSKAVAAKQRLEAEAA 798
+ YLL +CLIGRPS+SED DLRTARKTSGP R K+K + SP+ D SG+++ GA + +L S+AIR F GAGE QSRAQVK+E AAV AQE + + A+T K+V AV+ LS AV ++Q L+ EAA
Sbjct: 1 MHPYLLTYCLIGRPSSSEDPDLRTARKTSGPKGRGGKQKVKNGSPSTSDGSGSETSGAYTDVDLSSSAIRMFAGAGEVQSRAQVKKEHAAVAAANAQEQAPRVQQAHTGKLVTAVEALSAAVVSRQALDEEAA 133
BLAST of mRNA_F-serratus_M_contig7130.18345.1 vs. uniprot
Match: A0A6H5KPB5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB5_9PHAE) HSP 1 Score: 102 bits (253), Expect = 2.940e-21 Identity = 73/141 (51.77%), Postives = 93/141 (65.96%), Query Frame = 1
Query: 382 PKRSPNWLREYLLIFCLIGRPSASEDTDLRTARKTSGPPKR--KEKRKSGSVSPNVEDSGTDSGGAGSGGNLDSTAIRTFTGAGEGQSRAQVKREIAAVGKNVAQEHHRQKRLAYTEKMVDAVQTLSKAVAAKQRLEAEAA 798
P R W+ YLL +CLIGRPS+SED DLRTARKTSG R K+ K GS S ++ SG+++ GA + +L S+AIR F G GE QSRAQ+K+E A V AQE R+ + A+T K+V AV LS AV + Q L+ EAA
Sbjct: 81 PDRPNKWMHPYLLTYCLIGRPSSSEDPDLRTARKTSGLKGRGGKQNAKKGSPS-TIDGSGSETSGAYTEVDLSSSAIRMFAGTGEIQSRAQMKKEHAVVAAANAQEQARRVQQAHTGKLVTAVGALSAAVVSMQALDEEAA 220
BLAST of mRNA_F-serratus_M_contig7130.18345.1 vs. uniprot
Match: A0A6H5JGS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS6_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 2.670e-19 Identity = 74/167 (44.31%), Postives = 96/167 (57.49%), Query Frame = 1
Query: 313 IKQEPR--EDGAGSSKPPDDDAP---QYPKRSPNWLREYLLIFCLIGRPSASEDTDLRTARKTSGPPKRKEKRKSGSVSPNVEDSGTDSGGAGSGGNLDSTAIRTFTGAGEGQSRAQVKREIAAVGKNVAQEHHRQKRLAYTEKMVDAVQTLSKAVAAKQRLEAEAA 798
IK+EP G G P +D +YP R W+ YLL +CLIGR S+SED +LRTARKT G SG+ + GA + +L S+AIR F GAG+ QSRAQVK+E AAV AQE R+ + A+T K V AV+ LS AV ++Q L+ +AA
Sbjct: 169 IKEEPAVGNQGDGDGAPSEDIEEVDGEYPDRGNKWMHPYLLTYCLIGRASSSEDPELRTARKTDG-------------------SGSRTSGAHTEVDLSSSAIRMFAGAGKIQSRAQVKKEYAAVAAANAQEQVRRVQQAHTGKQVTAVEALSAAVVSRQALDEDAA 316
BLAST of mRNA_F-serratus_M_contig7130.18345.1 vs. uniprot
Match: A0A6H5JUN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN8_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 6.470e-18 Identity = 70/181 (38.67%), Postives = 91/181 (50.28%), Query Frame = 1
Query: 4 YVQGQPEGNLPSGQSGNDAIDNLLDGLY--AKTPGSPDNPVEVNLVEEALSRGDDETDNDAGGRGDGREQXXXXXXGEISQENVEDDAAKKHKGGVDEVEGETEDIKQEPREDGAGSSKPPDD------DAPQ---------YPKRSPNWLREYLLIFCLIGRPSASEDTDLRTARKTSGP 495
+V+GQP LPSG G+DAI+ LLDG+Y G+ ++P+E+ RG GG G+G E GE S ED + K KG + VE + P +G +P DD DAP +P+R W+ +YLL CLIGRP +SED DLRTARK SGP
Sbjct: 38 FVEGQPGDQLPSGSQGDDAIEYLLDGVYHMESGTGNAEDPIELE------ERG--------GGEGEGWEDDS----GESSPTESEDGESGKQKGTEEAVEPQESSGDDSPAGEGGMKKEPEDDTPGNGDDAPSEEITREEGGFPQRPNKWMHQYLLTLCLIGRPCSSEDPDLRTARKISGP 200
BLAST of mRNA_F-serratus_M_contig7130.18345.1 vs. uniprot
Match: A0A6H5J848_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J848_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 1.340e-15 Identity = 70/142 (49.30%), Postives = 84/142 (59.15%), Query Frame = 1
Query: 403 LREYLLIFCLIGRPSASEDTDLRTARKTSGPPKR----------KEKRKSGSVSPNVEDSGTDSGGAGSGGNLDSTAIRTFTGAGEGQSRAQVKREIAAVGKNVAQEHHRQKRLAYTEKMVDAVQTLSKAVAAKQRLEAEAA 798
+ +YLL FCLIGRP +SED DLRTARKTSGP R +K K GS P D GA + +L S AIR FTGAGE +S AQVK E AAV AQ R+ + T K+V AV+ LS AV ++Q L+ EAA
Sbjct: 1 MHQYLLTFCLIGRPCSSEDPDLRTARKTSGPNGRGASGAKGCGGTQKAKKGS--PGTSDESGSESGAYTEIDLSSNAIRMFTGAGEIESLAQVK-ETAAVAAANAQLQARRVQETNTGKLVTAVEALSAAVVSRQSLDEEAA 139 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7130.18345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7130.18345.1 >prot_F-serratus_M_contig7130.18345.1 ID=prot_F-serratus_M_contig7130.18345.1|Name=mRNA_F-serratus_M_contig7130.18345.1|organism=Fucus serratus male|type=polypeptide|length=266bp SYVQGQPEGNLPSGQSGNDAIDNLLDGLYAKTPGSPDNPVEVNLVEEALSback to top mRNA from alignment at F-serratus_M_contig7130:10886..11683+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7130.18345.1 ID=mRNA_F-serratus_M_contig7130.18345.1|Name=mRNA_F-serratus_M_contig7130.18345.1|organism=Fucus serratus male|type=mRNA|length=798bp|location=Sequence derived from alignment at F-serratus_M_contig7130:10886..11683+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7130:10886..11683+ >mRNA_F-serratus_M_contig7130.18345.1 ID=mRNA_F-serratus_M_contig7130.18345.1|Name=mRNA_F-serratus_M_contig7130.18345.1|organism=Fucus serratus male|type=CDS|length=1596bp|location=Sequence derived from alignment at F-serratus_M_contig7130:10886..11683+ (Fucus serratus male)back to top |