prot_F-serratus_M_contig712.18337.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig712.18337.1
Unique Nameprot_F-serratus_M_contig712.18337.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length490
Homology
BLAST of mRNA_F-serratus_M_contig712.18337.1 vs. uniprot
Match: A0A6H5JTZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTZ5_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 7.180e-74
Identity = 160/414 (38.65%), Postives = 233/414 (56.28%), Query Frame = 0
Query:    4 LRSNLPSNQIVGTDSFTYRVYDLDQNCSLPATINVVVYTGVSALGGDGRWQCYEEEDCEISLYGEAISESLPNMWFTITGVPMYGYLIDARNGDSVQIGSVLSKRVSYPYEDGVLLLYRPSIDFFNDPNITWMGIPLPEGNTEVITFYASVSEGDAVLSSATADQSILVTNVDDETRIACLEGYTYEVMATQTVTEFNGTDQ-RPDRLIVANISLSEVDKNVDPVRVDIEIDTGAVTLNSEYRDRLSFYIGCSGGSTTWYCWSDPILQNKMTFIGTPSDVENSLNGMTYLNGYRYANDNFSITVYHGSGGGSCMSSKGFTTTSVRSEECVISSCKMHVKVGSYYYEPSAEDSDGALITISLKTMSYFFIAAISTFTLLIFRLSYKLFVVFFRSLFCCFNFGRKKTKKGEAGKSE 416
            LRSN P++Q VG D FT++V+D   N S+PA IN+ V +GVSA+     W C+E+ +CE++L+G   S++  NM  TI+GVP+YG L DA     V++GS LS  V YPY++G  ++Y+P +DFF DP   W G  L E +  ++TFYAS+  G   + S    Q + V NVDD++ I C +    + +AT  V +    D  RPDRL + N S++E D  VDPVRV +  + G +TLN   R R+SF   CSG +  W C SD +    M FIG P DV++ LNGM +++      DN ++T++ G  G  C+    F T SVR   C  SSC + + V   +     +D+  ALI++++      F A IS    L+     K   + F   FCC     +++K GE+ K E
Sbjct:  510 LRSNSPTDQTVGDDMFTFKVFDSHWNFSVPAAINITVLSGVSAISQSEIWWCFEDVNCEVALFGSTKSDNAGNMSITISGVPVYGNLFDAGINMPVEVGSTLSSPVKYPYDEGASVVYQPQMDFFTDPTTQWNGTQLLERDDVIVTFYASIELGGTRIFSPEVSQELKVRNVDDQSAIRCGDSI-LQTLATGVVDDDAILDDVRPDRLFIYNFSITEKDDGVDPVRVSVTAEYGYLTLNDTLRSRVSFVNPCSG-THNWRCRSDGVYSQNMIFIGAPEDVQHVLNGMLFVSYESNVVDNMTVTIHDGFEG-DCIWE--FATYSVR-PTCHSSSCSITINVTETWLN---DDTGPALISVTITEFFVLF-ALISALGGLVVSKCLK--SLKFCLCFCCGRRKHRRSKGGESNKME 911          
BLAST of mRNA_F-serratus_M_contig712.18337.1 vs. uniprot
Match: A0A7S2S457_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S457_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 7.430e-17
Identity = 74/242 (30.58%), Postives = 117/242 (48.35%), Query Frame = 0
Query:    7 NLPSNQIVGT---DSFTYRVYDLDQNCSLPATINVVVYTGVSALGGDGRWQCYEEEDC--EISLYGEAISESLPNMWFTITGVPMYGYLIDAR--NGDSVQIGSVLSKRVSYPYEDGVLLLYRPSIDFFNDPNITWMGIPLPEGNTEVITFYASVSEGDAVLSSATADQSILVTNVDDETRIACLEGYTYEVMATQTVTEFNGTDQRPDRLIVANISLSEVDKNVDPVRVDIEIDTGAVTLN 241
            +LP    +GT   DSF Y+V D     S PA  ++ +   + A   D       EE     +S      S+   ++   +   P +G L+D    N  ++  G +L+  + YPY D VL  Y    D+FN P+  W G  +P  + +V TF    S G A + S TA Q ++V NV+D   ++  +G T++V    T T+   +    D L +  I+ ++VDKNVDPV+V +    G +TL+
Sbjct:  166 SLPLLDDLGTFAFDSFEYKVADSTGANSTPAWAHLEIRKPIFAEASDTPLHYTVEEQVLGNVSASASDGSDLQRDLQIRVLSTPSHGMLVDLYDVNLPNLTSGDLLNLTLRYPYADPVLFGYYGDRDYFNSPSTMWNGSSIPS-DPDVFTFRTEQS-GKASVHSTTATQYVVVRNVNDRPHLSTPDG-TFDVEGLGTSTDDADSS---DSLTITGITFTDVDKNVDPVKVYVTCKFGFITLD 401          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig712.18337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTZ5_9PHAE7.180e-7438.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2S457_9STRA7.430e-1730.58Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 366..386
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..365
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 387..489
NoneNo IPR availableTMHMMTMhelixcoord: 368..390

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig712contigF-serratus_M_contig712:384438..385907 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig712.18337.1mRNA_F-serratus_M_contig712.18337.1Fucus serratus malemRNAF-serratus_M_contig712 381873..386630 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig712.18337.1 ID=prot_F-serratus_M_contig712.18337.1|Name=mRNA_F-serratus_M_contig712.18337.1|organism=Fucus serratus male|type=polypeptide|length=490bp
MSILRSNLPSNQIVGTDSFTYRVYDLDQNCSLPATINVVVYTGVSALGGD
GRWQCYEEEDCEISLYGEAISESLPNMWFTITGVPMYGYLIDARNGDSVQ
IGSVLSKRVSYPYEDGVLLLYRPSIDFFNDPNITWMGIPLPEGNTEVITF
YASVSEGDAVLSSATADQSILVTNVDDETRIACLEGYTYEVMATQTVTEF
NGTDQRPDRLIVANISLSEVDKNVDPVRVDIEIDTGAVTLNSEYRDRLSF
YIGCSGGSTTWYCWSDPILQNKMTFIGTPSDVENSLNGMTYLNGYRYAND
NFSITVYHGSGGGSCMSSKGFTTTSVRSEECVISSCKMHVKVGSYYYEPS
AEDSDGALITISLKTMSYFFIAAISTFTLLIFRLSYKLFVVFFRSLFCCF
NFGRKKTKKGEAGKSEDNGGKDDKDKDTDGASRGHGVSGSRKDGHRKKRA
SAGKKSTSKNSTNKKSTSKKSTNRTTKKELALVDRTIRP*
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