prot_F-serratus_M_contig712.18335.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig712.18335.1
Unique Nameprot_F-serratus_M_contig712.18335.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length152
Homology
BLAST of mRNA_F-serratus_M_contig712.18335.1 vs. uniprot
Match: A0A6H5K966_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K966_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 4.280e-29
Identity = 55/92 (59.78%), Postives = 68/92 (73.91%), Query Frame = 0
Query:    1 MVVAVVQKCGRESRSKGRDPPTNLGFYLHEFLGFFGDTFNYGTTGITLLGEGGGFLFNKRETEWFTPKKSRFLCLQSPIDPSVDVGANSFKI 92
            MVVA+VQKCGRE+R KGRDPPTNLGF L EF  F+G+  NY   GITLLGEGGG  +NKR+T WF       L +Q+P + +VD G+NS+K+
Sbjct:  356 MVVALVQKCGREARDKGRDPPTNLGFLLEEFFDFYGNQLNYAAVGITLLGEGGGGFYNKRDTGWFNESHPFRLSMQNPHETNVDTGSNSYKV 447          
BLAST of mRNA_F-serratus_M_contig712.18335.1 vs. uniprot
Match: I2CPC2_NANGC (DNA polymerase sigma subunit (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPC2_NANGC)

HSP 1 Score: 70.1 bits (170), Expect = 3.400e-11
Identity = 40/101 (39.60%), Postives = 56/101 (55.45%), Query Frame = 0
Query:    1 MVVAVVQKCGRESRSKGRDPPT-NLGFYLHEFLGFFGDTFNYGTTGITLLGEGGGFLFNKRETEWFTPKKSRFLCLQSPIDPSVDVGANSFKIGAEKANMA 100
            MV+A +Q   +E+    R   T NLG     FL F+G  FNY   GI++LGE  G LF K E   +   +   L +++P+DPSVDVG NS+ +   K  +A
Sbjct:  238 MVIAYLQHAQKEADKASRSERTRNLGSLFLGFLRFYGHQFNYEEVGISVLGE--GILFRKMERGMYQHDRPDILAMENPLDPSVDVGKNSYNLPVLKVALA 336          
BLAST of mRNA_F-serratus_M_contig712.18335.1 vs. uniprot
Match: A0A7S0GSK9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GSK9_9EUKA)

HSP 1 Score: 58.9 bits (141), Expect = 2.800e-7
Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 0
Query:   23 NLGFYLHEFLGFFGDT-FNYGTTGITLLGEGGGFLFNKRETEWFTPKKSRFLCLQSPIDPSVDVGANSFKIG 93
            NL   L +F  FFG T FNY   G+ + G GG   ++KR+   F   +   L L+SP+DPS+D+GANSF +G
Sbjct:  364 NLAAILMDFFKFFGGTEFNYEKVGLIVTGNGG--YYDKRKKGRFNGSRPWALSLESPLDPSLDIGANSFMMG 433          
BLAST of mRNA_F-serratus_M_contig712.18335.1 vs. uniprot
Match: A0A812NC20_9DINO (Cid14 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812NC20_9DINO)

HSP 1 Score: 58.5 bits (140), Expect = 3.790e-7
Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   22 TNLGFYLHEFLGFFGDTFNYGTTGITLLGEGGGFLFNKRETEWFTPKKS--RFLCLQSPIDPSVDVGANSFKIGAEKA 97
            T+LG  L +F  ++G  F Y  TGI++    GG LF++ +  W    +S    LCL+SP +PS+D+G   FKIG  +A
Sbjct:  189 TSLGNLLLDFFRYYGQEFRYAATGISV--REGGSLFDRAKRGWSATTRSGQATLCLESPTEPSLDIGGRIFKIGLVRA 264          
BLAST of mRNA_F-serratus_M_contig712.18335.1 vs. uniprot
Match: A0A813BAR4_9DINO (Cid14 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BAR4_9DINO)

HSP 1 Score: 58.2 bits (139), Expect = 5.090e-7
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 0
Query:   22 TNLGFYLHEFLGFFGDTFNYGTTGITLLGEGGGFLFNKRETEWFTPKKS--RFLCLQSPIDPSVDVGANSFKIGAEKA 97
            T LG  L +F  ++G  F Y  TGI++    GG LF++ +  W    +S    LCL+SP +PS+D+G   FKIG  +A
Sbjct:  155 TTLGNLLLDFFRYYGQEFRYAATGISV--HEGGSLFDRAKRGWTATTRSGQATLCLESPTEPSLDIGGRIFKIGLVRA 230          
BLAST of mRNA_F-serratus_M_contig712.18335.1 vs. uniprot
Match: A0A812VMM7_9DINO (Cid14 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812VMM7_9DINO)

HSP 1 Score: 58.2 bits (139), Expect = 5.390e-7
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 0
Query:   22 TNLGFYLHEFLGFFGDTFNYGTTGITLLGEGGGFLFNKRETEWFTPKKS--RFLCLQSPIDPSVDVGANSFKIGAEKA 97
            T LG  L +F  ++G  F Y  TGI++    GG LF++ +  W    +S    LCL+SP +PS+D+G   FKIG  +A
Sbjct:  314 TTLGNLLLDFFRYYGQEFRYAATGISV--REGGSLFDRAKRGWTATTRSGQATLCLESPTEPSLDIGGRIFKIGLVRA 389          
BLAST of mRNA_F-serratus_M_contig712.18335.1 vs. uniprot
Match: A0A812VPM9_9DINO (Cid14 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812VPM9_9DINO)

HSP 1 Score: 58.2 bits (139), Expect = 5.810e-7
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 0
Query:   22 TNLGFYLHEFLGFFGDTFNYGTTGITLLGEGGGFLFNKRETEWFTPKKS--RFLCLQSPIDPSVDVGANSFKIGAEKA 97
            T LG  L +F  ++G  F Y  TGI++    GG LF++ +  W    +S    LCL+SP +PS+D+G   FKIG  +A
Sbjct:  646 TTLGNLLLDFFRYYGQEFRYAATGISV--REGGSLFDRAKRGWTATTRSGQATLCLESPTEPSLDIGGRIFKIGLVRA 721          
BLAST of mRNA_F-serratus_M_contig712.18335.1 vs. uniprot
Match: A0A1Q9EF09_SYMMI (Poly(A) RNA polymerase cid14 n=3 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9EF09_SYMMI)

HSP 1 Score: 58.2 bits (139), Expect = 6.030e-7
Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 0
Query:   22 TNLGFYLHEFLGFFGDTFNYGTTGITLLGEGGGFLFNKRETEWFTPKKS--RFLCLQSPIDPSVDVGANSFKIGAEKA 97
            T LG  L +F  ++G  F Y  TGI++    GG LF++ +  W    +S    LCL+SP +PS+D+G   FKIG  +A
Sbjct: 1492 TTLGNLLLDFFRYYGQEFRYAATGISV--HEGGSLFDRAKRGWTATTRSGQATLCLESPTEPSLDIGGRIFKIGLVRA 1567          
BLAST of mRNA_F-serratus_M_contig712.18335.1 vs. uniprot
Match: R9QTG4_KARVE (Non-canonical poly(A) polymerase-like protein n=1 Tax=Karlodinium veneficum TaxID=407301 RepID=R9QTG4_KARVE)

HSP 1 Score: 53.9 bits (128), Expect = 1.530e-5
Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 0
Query:   22 TNLGFYLHEFLGFFGDTFNYGTTGITLLGEGGGFLFNKRETEWFTPKKSR---FLCLQSPIDPSVDVGANSFKIGAEK 96
            T+LG  L +F  ++G  F Y T  I+LL   GG +FNK E      K  +    LCL+SP+DPSVD+G   F++   K
Sbjct:  328 TSLGHLLFDFFRYYGKEFRYETQAISLLN--GGRVFNKSERGKGGGKGKKGGIALCLESPLDPSVDLGGPCFRMSVLK 403          
BLAST of mRNA_F-serratus_M_contig712.18335.1 vs. uniprot
Match: A0A812IUI5_SYMPI (Cid14 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812IUI5_SYMPI)

HSP 1 Score: 53.5 bits (127), Expect = 1.870e-5
Identity = 28/72 (38.89%), Postives = 41/72 (56.94%), Query Frame = 0
Query:   22 TNLGFYLHEFLGFFGDTFNYGTTGITLLGEGGGFLFNKRETEWFTPKKS--RFLCLQSPIDPSVDVGANSFK 91
            T LG  L +F  ++G  F Y  TGI++    GG LF++ +  W    +S    LCL+SP +PS+D+G   FK
Sbjct:  281 TTLGNLLLDFFRYYGQEFRYAATGISV--RDGGSLFDRAKRGWTATTRSGQATLCLESPTEPSLDIGGRIFK 350          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig712.18335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5K966_9PHAE4.280e-2959.78Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
I2CPC2_NANGC3.400e-1139.60DNA polymerase sigma subunit (Fragment) n=1 Tax=Na... [more]
A0A7S0GSK9_9EUKA2.800e-744.44Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A812NC20_9DINO3.790e-739.74Cid14 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A813BAR4_9DINO5.090e-739.74Cid14 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A812VMM7_9DINO5.390e-739.74Cid14 protein n=1 Tax=Symbiodinium sp. CCMP2456 Ta... [more]
A0A812VPM9_9DINO5.810e-739.74Cid14 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]
A0A1Q9EF09_SYMMI6.030e-739.74Poly(A) RNA polymerase cid14 n=3 Tax=Symbiodinium ... [more]
R9QTG4_KARVE1.530e-541.03Non-canonical poly(A) polymerase-like protein n=1 ... [more]
A0A812IUI5_SYMPI1.870e-538.89Cid14 protein n=1 Tax=Symbiodinium pilosum TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002058PAP/25A-associatedPFAMPF03828PAP_assoccoord: 23..82
e-value: 2.8E-8
score: 33.9
NoneNo IPR availableGENE3D1.10.1410.10coord: 1..106
e-value: 1.6E-15
score: 59.1
NoneNo IPR availablePANTHERPTHR23092:SF15INACTIVE NON-CANONICAL POLY(A) RNA POLYMERASE PROTEIN TRF4-2-RELATEDcoord: 1..92
NoneNo IPR availablePANTHERPTHR23092POLY(A) RNA POLYMERASEcoord: 1..92
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 1..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig712contigF-serratus_M_contig712:298423..302624 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig712.18335.1mRNA_F-serratus_M_contig712.18335.1Fucus serratus malemRNAF-serratus_M_contig712 297686..302723 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig712.18335.1 ID=prot_F-serratus_M_contig712.18335.1|Name=mRNA_F-serratus_M_contig712.18335.1|organism=Fucus serratus male|type=polypeptide|length=152bp
MVVAVVQKCGRESRSKGRDPPTNLGFYLHEFLGFFGDTFNYGTTGITLLG
EGGGFLFNKRETEWFTPKKSRFLCLQSPIDPSVDVGANSFKIGAEKANMA
KRSKKRPPPPQSARDSPPAKTRRSVECQRNPLQKDPAGEGVPKMHLPSAP
C*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002058PAP_assoc