mRNA_F-serratus_M_contig124.1828.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5JRT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRT6_9PHAE) HSP 1 Score: 233 bits (594), Expect = 3.710e-65 Identity = 142/385 (36.88%), Postives = 213/385 (55.32%), Query Frame = 3
Query: 51 GKRKQTSSIWRFMQLFVPPDSKGRNVKCIVKIKLPTSVGNVLPARTKTCGALFKHTKGDRVAGISGSGTSGLKHHLQKHHPEE-YAVMEDAG-RASKKAKVEKSVI---LAGNSTT------AKRGTLDTMFTRPMSDKEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
GKR+ T+ W+ M F P +NV C+VK K T TC L K T + GSGT+GL H++K HP + E+ G +A +K ++ ++ AG+ST + +L + K E +R+VI CC+++RP M GF+ F+G L P YV+S + + T ++ LD L RV+ +I+ L +GY+G G Q D+T+ G EY TFTVS+V KG+TD+ R+ L +AFPG HT++DI+PW ++ ++YF +G+ + P+ +F+A TVDQG N++NA LG+ V+ C+ HR++TAV WA GI G+ R +N + LM + A GVFSHS NND K +Q+
Sbjct: 77 GKRRLTAWCWQVMSRFTP-SINDKNVVCLVKKKDGT-----------TCNHLMKWTPSEGKQ--RGSGTTGLTKHIEKFHPTTAQKIKEEEGTQAERKESIQAAIAGDSSAGSSTALPSASASSSSSLVNYMVPKLDKKRREMADLRFVIWCCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYSRVKTSIVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVEKGSTDVTRVALACRAFPGTHTADDISPWIEELTREYFADFMGE-DVEPKDVFLAFTVDQGGNVVNACKALGVPVVKCNCHRVNTAVLWALGIAGNGR-------RNKVMGDLMKKLAALVGVFSHSAVNNDKLKELQR 439
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5JGG8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGG8_9PHAE) HSP 1 Score: 214 bits (546), Expect = 2.390e-58 Identity = 139/398 (34.92%), Postives = 199/398 (50.00%), Query Frame = 3
Query: 51 GKRKQTSSIWRFMQLFVPPDSKGRNVKCIVKIKLPTSVGNVLPARTKTCGALFKHTKGDRVAGISGSGTSGLKHHLQKHHPEEYAVMEDAGRASKKAKVEKSVILAG------------NSTTAKRGTLDTMFTRPMSDKEM------------EEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
GKR+ TS W F F P G+NV C+VK A CG L K G G+GTSG+ HL+ H E D +A A + + + + ++ G + +++ P S M + R+V+ CC+D+RP + GF+ F+G L P YV + + +T + LDEL V +++ +L +GY+GP G Q D+T+ G EY TFTV+FV KG TDM R+ L +AFPG HT+EDI PW ++ +YF +G+ + P +F+A TVDQG N++NA LG+ V+ C+ HRL+TAV WA GI G R N ++ LM + A GVFSHS NND K +Q+
Sbjct: 70 GKRRLTSWTWNFASRF-SPSINGKNVVCLVK-----------KADGTPCGRLMKWE--GAALGKKGTGTSGISKHLEICHKSEV----DKHKAKVGASEDNTAPIVAALGEFFFFCPRLKNKESRDGRVYRLYSAPSSSSLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGE-SVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRLNP-------AMGTLMKKLAAMVGVFSHSAVNNDELKELQR 441
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5JQI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQI6_9PHAE) HSP 1 Score: 203 bits (517), Expect = 2.390e-55 Identity = 107/250 (42.80%), Postives = 152/250 (60.80%), Query Frame = 3
Query: 423 MSDKEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
M K+ E +RYVI CC++ RP M GF+ F+G L P YV + + TT ++LD L +RV A++ L + +GY G G Q D+T+ G EY TF VS+V KG TD+ R++L T+AFPG HT++DI PW + +YF ++G G+ + +F+A TVDQG N++NA LG+ V+ C+ HR+++AV WA GI GS TCKN ++KL A + GVFSHS NND K +Q+
Sbjct: 9 MLQKQREFVDLRYVIWCCINPRPMQMRYDDGFKLFVGALSPQYVDTTMASTTFNKLLDTLHDRVEQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYFTDLMG-GSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSAT-----TCKNKPMKKLAALV----GVFSHSAVNNDMLKELQR 248
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5JXV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXV5_9PHAE) HSP 1 Score: 201 bits (510), Expect = 3.890e-55 Identity = 107/254 (42.13%), Postives = 151/254 (59.45%), Query Frame = 3
Query: 414 TRPMSDKEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATD-MERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
+R M K+ + +RYVI CC+++RP M GF+ F+G L P YV + + TT ++LD L +RV+ AI+ L +GY G G D+T+ EY TFTVS+V KG TD + R+ L T+AFPG HT+EDI PW + +YF+ ++G + P +F+ TVDQG N++NA LG+ V+ C+ HR+++AV WA GI G R TCKN + LM + A GVFSHS NND K +Q+
Sbjct: 2 SRKMDKKQRDLADLRYVIWCCINLRPQQMRYDDGFKLFVGVLSPQYVDTTMASTTFNKVLDALYDRVKQAIMDDLRLLREEFLGMGYGGAFLGAHLDLTTVANEEYITFTVSYVKKGKTDDVTRVALATRAFPGSHTAEDIKPWIEALTLEYFKDLIGP-SVQPHDVFLGFTVDQGKNIVNAYTALGVPVVECNCHRVNSAVLWALGIAGCAR-----TCKNKLMGDLMKKLAASVGVFSHSAVNNDMLKEIQR 249
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5JZU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZU3_9PHAE) HSP 1 Score: 201 bits (511), Expect = 1.610e-54 Identity = 104/247 (42.11%), Postives = 153/247 (61.94%), Query Frame = 3
Query: 432 KEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
K+ E +RY+I CC+++RP M GF+ F+G L P YV + + TT ++LD L +R++ A++ L + +GY G G Q D+T+ G EY TF VS+V KG TD+ R++L T+AFPG HT++DI PW + +Y ++G G+ + +F+A TVDQG N++NA LG+ V+ C+ HR+++AV WA GI GSV TCKN ++KL A + GVFSHS NND K +Q+
Sbjct: 12 KQREFADLRYMIWCCINLRPMQMRYDDGFKLFVGALSPQYVDTTMAATTFNKLLDTLHDRMKQAVVDDLRSVREECLGMGYGGAFLGAQLDLTTVAGEEYITFAVSYVKKGDTDVSRVSLATRAFPGSHTADDIKPWIEALTLEYLTDLMG-GSVESQDVFLAFTVDQGKNVVNACTALGVPVVECNCHRVNSAVLWALGIAGSVT-----TCKNKPMKKLAALV----GVFSHSAVNNDMLKELQR 248
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5JTB8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB8_9PHAE) HSP 1 Score: 196 bits (498), Expect = 1.290e-52 Identity = 102/239 (42.68%), Postives = 144/239 (60.25%), Query Frame = 3
Query: 456 RYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
R+V+ CC+D+RP + GF+ F+G L P YV + + +T + LDEL V +++ +L +GY+GP G Q D+T+ G EY TFTV+FV KG TDM R+ L +AFPG HT+EDI PW ++ +YF +G+ + P +F+A TVDQG N++NA LG+ V+ C+ HRL+TAV WA GI G R N ++ LM + A GVFSHS NND K +Q+
Sbjct: 16 RFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKLTLEYFSGFMGE-SVQPSDVFLAFTVDQGKNIINACTALGVTVVECNCHRLNTAVVWALGIAGKGRLNP-------AMGTLMKKLAAMVGVFSHSAVNNDELKELQR 246
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5KJ52_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ52_9PHAE) HSP 1 Score: 197 bits (502), Expect = 2.770e-52 Identity = 138/409 (33.74%), Postives = 205/409 (50.12%), Query Frame = 3
Query: 51 GKRKQTSSIWRFMQLFVPPDSKGRNVKCIVKIKLPTSVGNVLPARTKTCGALFKHTKGDRVAGISGSGTSGLKHHLQKHHPEEY-AVMED-----AGRASKKAKVE-----------KSVILAGNSTTAKRGTLDTMFTRPMSDKEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPW--------FRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQ--QEVVSVLDE 1196
GK+ + S +W+ + F P + G+NV C+ C L D GT G+ H +K HP Y A+M+D GRA+ A V K AG+ST + + + T P+ + R+V+ C +++RP NM G++ +G LCP YV+S + T IL + A+ L H S +LGY GP G Q D+T+ EY TF+VS++ + AT + R+ L T+AFPG HT+ DI PW F+ + ++F ++G+ N P+ +F+A TVDQG N++NA L ++VL C+ HRL++ WA GINGS+R T +N ++ KLM + A GVFSHS NND K +Q QE ++ E
Sbjct: 68 GKKTKRSWVWQVCREFKPLIN-GKNVFCMA------------------CKHLMLWKPAD--------GTGGMSSHYKKKHPALYKALMDDHTTTAQGRANVAAAVAFDPKPTGKATGKGKGKAGSSTPSIKDYMQT--GNPLLASTEAAANRRFVVWCAINMRPQNMRYDDGYKLHMGMLCPKYVESTMSDATFNSILSTIYTETCDAVKTGLRLHRESCVKLGYVGPFLGAQLDLTTVANEEYITFSVSYIAEAATTITRVGLATRAFPGSHTAADIEPWIEKASFTTFKLLTTEFFADMMGE-NVQPKDVFLAFTVDQGGNVVNACRNLDVEVLKCNAHRLNSVTMWALGINGSIR-----TGENPAMEKLMKRLAAVVGVFSHSAVNNDELKDIQRLQEEFQIIYE 441
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5KVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVP4_9PHAE) HSP 1 Score: 139 bits (351), Expect = 6.390e-32 Identity = 94/292 (32.19%), Postives = 136/292 (46.58%), Query Frame = 3
Query: 51 GKRKQTSSIWRFMQLFVPPDSKGRNVKCIVKIKLPTSVGNVLPARTKTCGALFKHTKGDRVAGISGSGTSGLKHHLQKHHPEEYAVMEDAGRASKKAKVEKSVILAG------------NSTTAKRGTLDTMFTRPMSDKEM------------EEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQV 854
GKR+ TS W F F P G+NV C+VK A CG L K G G+GTSG+ HL+ H E D +A A + + + + ++ G + +++ P S M + R+V+ CC+D+RP + GF+ F+G L P YV + + +T + LDEL V +++ +L +GY+GP G Q D+T+ G EY TFTV+FV KG TDM R+ L +AFPG HT+EDI PW +
Sbjct: 1154 GKRRLTSWTWNFASRF-SPSINGKNVVCLVK-----------KADGTPCGRLMKWE--GAALGKKGTGTSGISKHLEICHKSEV----DKHKAKVGASEDNTAPIVAALGEFFFFCPRLKNKESRDGRVYRLYSAPSSSSLMNYMVPTMTKARKDAADRRFVLWCCIDLRPEQLRFDQGFKLFLGSLSPEYVTTTMAKSTFNQTLDELYGTVLSSVVGELRTLREENLGMGYSGPFLGAQLDLTTAAGEEYITFTVTFVKKGDTDMTRIALAARAFPGSHTAEDIQPWIEKA 1427
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: A0A6H5KFJ9_9PHAE (Fanconi-associated nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFJ9_9PHAE) HSP 1 Score: 133 bits (335), Expect = 6.460e-30 Identity = 86/256 (33.59%), Postives = 127/256 (49.61%), Query Frame = 3
Query: 105 PDSKGRNVKCIVKIKLPTSVGNVLPARTKTCGALFKHTKGDRVAGISGSGTSGLKHHLQKHHPEEYAVMEDAGRASKKAKVEKSVILAGNSTT----AKRGTLDTM--FTRPMSDKEMEEHHIRYVIMCCVDVRPFNMARYTGFQYFIGGLCPSYVQSIIHHTTMERILDELGERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQV 854
P +NV C+VK K T TC L K T + G+GTS L H+ K HP D G + + + ++ I+ G +KR L M K E +R+VI C+++RP M GF+ F+G L P YV+S + + T ++ LD L +V +++ L +GY+G G Q D+T+ G EY TFTVS+V KG+TD+ R+ L +AFPG HT++DI PW ++
Sbjct: 214 PSINDKNVVCLVKKKDGT-----------TCNHLMKWTPSESNK-QRGTGTSWLSKHIAKAHPATAKTRRDEGTPADRKEPIRAAIVHGRFIDRFIISKRVELIVAGDMVPKMDKKRREMADLRFVIWRCINLRPQQMRHDDGFKLFLGALSPDYVESTMSNDTFDKNLDTLYGKVNTSVVDDLRTLREECLGMGYSGAFLGAQLDLTTVAGEEYITFTVSYVKKGSTDVTRVALACRAFPGTHTADDIRPWIEEL 457
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Match: D7G7X8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7X8_ECTSI) HSP 1 Score: 102 bits (255), Expect = 5.060e-22 Identity = 65/189 (34.39%), Postives = 102/189 (53.97%), Query Frame = 3
Query: 606 ERVRIAIIAKLEAHINSVKELGYTGPMFGLQSDMTSTNGTEYCTFTVSFVPKGATDMERLTLTTKAFPGRHTSEDIAPWFRQVIKDYFEPILGKGNAHPEKLFIAGTVDQGANMMNALVMLGIDVLICSGHRLSTAVGWAFGINGSVRENGQGTCKNLSLRKLMATMTACAGVFSHSPCNNDAFKAVQQ 1172
+ + +++A+L+ +K++GY P L S T+ ++ + + G + L+L TK F G+HT I W Q+ F+ I+ P +++A TVDQG N++NA LGI + C GHR+ ++V W G++GSV T KN R L+ ACAG+FSHS N+DAF+ VQ+
Sbjct: 3 QTAKTSLVAQLKEAYEELKKIGYHLPRPVLLS--TAGLDIDWHRRVLHSLGVGDSLPVHLSLATKVFRGQHTQATIKTWLEQLTTGVFQSIVPA--VVPSDVYVAATVDQGLNVVNACKSLGIPTIPCLGHRIHSSVMWGIGVSGSVA-----TQKNKKGRVLVGRCAACAGMFSHSCTNSDAFRLVQE 182 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig124.1828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig124.1828.1 >prot_F-serratus_M_contig124.1828.1 ID=prot_F-serratus_M_contig124.1828.1|Name=mRNA_F-serratus_M_contig124.1828.1|organism=Fucus serratus male|type=polypeptide|length=396bp MQLFVPPDSKGRNVKCIVKIKLPTSVGNVLPARTKTCGALFKHTKGDRVAback to top mRNA from alignment at F-serratus_M_contig124:561680..564829- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig124.1828.1 ID=mRNA_F-serratus_M_contig124.1828.1|Name=mRNA_F-serratus_M_contig124.1828.1|organism=Fucus serratus male|type=mRNA|length=3150bp|location=Sequence derived from alignment at F-serratus_M_contig124:561680..564829- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig124:561680..564829- >mRNA_F-serratus_M_contig124.1828.1 ID=mRNA_F-serratus_M_contig124.1828.1|Name=mRNA_F-serratus_M_contig124.1828.1|organism=Fucus serratus male|type=CDS|length=2376bp|location=Sequence derived from alignment at F-serratus_M_contig124:561680..564829- (Fucus serratus male)back to top |