mRNA_F-serratus_M_contig71.18309.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: D7FYS0_ECTSI (Tub domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYS0_ECTSI) HSP 1 Score: 242 bits (617), Expect = 1.680e-69 Identity = 110/147 (74.83%), Postives = 133/147 (90.48%), Query Frame = 2
Query: 305 SDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
+++++ AELGAISF +PGLV++LR+GSQPRKF VLLPALD +G PV+HKVDP DADSD+LSR++QGR+G MF L++REPT+ +GNYRLNFHGRVTVPS KN QLVSPDD HTVCQFGKVG+DRFHLDYR+P+NAFQA CIS+AQFN
Sbjct: 447 TNDQEVAELGAISFEKPGLVDHLRDGSQPRKFTVLLPALDCDGSPVAHKVDPYDADSDMLSRMKQGRHGNMFLLQSREPTYTKGNYRLNFHGRVTVPSVKNFQLVSPDDALHTVCQFGKVGEDRFHLDYRAPINAFQALCISIAQFN 593
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A835Z9X0_9STRA (Tubby C-terminal-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X0_9STRA) HSP 1 Score: 191 bits (484), Expect = 4.040e-54 Identity = 88/150 (58.67%), Postives = 115/150 (76.67%), Query Frame = 2
Query: 296 VYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
+Y +D++K ELGA+ F +PGLV+++ EGSQPRKF+VLLP +D + P+ HKVDP D ++ ++ R G MF L+T++P F GNYRLNF GRVTVPS KN QLV+PDD + V QFGKVG DRFHLD+R+P+NAFQAF I+L+QFN
Sbjct: 81 IYTNDQEKE-ELGAVLFEKPGLVDHVMEGSQPRKFYVLLPPIDADSTPIPHKVDPYDPQGPMVELLKARRTGKMFLLQTKDPVFENGNYRLNFRGRVTVPSVKNFQLVAPDDVDYIVGQFGKVGDDRFHLDFRAPLNAFQAFAIALSQFN 229
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A7S2V188_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V188_9STRA) HSP 1 Score: 190 bits (482), Expect = 4.150e-54 Identity = 89/151 (58.94%), Postives = 115/151 (76.16%), Query Frame = 2
Query: 293 VVYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
++Y +D ++ E+GAI F +PG V+ ++EGSQPRK VLLP LD +GVPV +K +P D+ LL R+R + G MF L+T++P F +GNYRLNFHGRVTV S KN QL SPDD + VCQFGKV +DRFHLDYR+P+NAFQAF ++L QFN
Sbjct: 59 IIYTNDAERE-EMGAIIFNKPGFVDQVKEGSQPRKLHVLLPQLDADGVPVPNKPNPRRPDTSLLERLRSAKTGKMFCLQTKDPVFEKGNYRLNFHGRVTVASVKNFQLCSPDDIDYVVCQFGKVDEDRFHLDYRAPLNAFQAFALALVQFN 208
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A7S3YIB9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIB9_HETAK) HSP 1 Score: 179 bits (453), Expect = 2.340e-49 Identity = 83/151 (54.97%), Postives = 115/151 (76.16%), Query Frame = 2
Query: 293 VVYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
V++ +D +K ELGAI+F + G ++ ++EGSQPRK ++LP LD +G+P+ +K + ++ LLSR++ G+ G MF ++++P F +GNYRLNFHGRVTV S KN QLVSPDD + VCQFGKV +DRFHLDYR+P NAFQAF ++L QFN
Sbjct: 96 VIFTNDHEKE-ELGAITFEKTGFMDQVKEGSQPRKLKIILPQLDPDGIPLPNKPERGRPETSLLSRVKIGQTGRMFYFESKDPVFEKGNYRLNFHGRVTVASVKNFQLVSPDDIDYVVCQFGKVDEDRFHLDYRAPFNAFQAFAVTLCQFN 245
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A812Y244_SYMMI (Tulp3 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y244_SYMMI) HSP 1 Score: 155 bits (391), Expect = 1.670e-41 Identity = 73/141 (51.77%), Postives = 97/141 (68.79%), Query Frame = 2
Query: 326 ELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDA-DSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
E+ AI F R GLV+ +++G QPRK VLLP LD E PV H+ + ++ +++ MF L ++EP + GNYRLNFHGRV+VPS KN QL SPDD H +CQFGK+G DRFHLDY++P+NAFQAF ++L F+
Sbjct: 14 EVAAIVFDRVGLVSQIKDGCQPRKMSVLLPQLDAESHPVPHRTENKHGVKKSMVDMLKRDDTSRMFLLASKEPVYENGNYRLNFHGRVSVPSVKNFQLSSPDDPGHVICQFGKIGDDRFHLDYKAPLNAFQAFSLALCHFD 154
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A7S2GC62_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GC62_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.420e-41 Identity = 76/156 (48.72%), Postives = 107/156 (68.59%), Query Frame = 2
Query: 284 MSGVVYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYG-GMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFNH 748
+ V+Y ++E K E+GA+ FA+P +++++R+G+QPRK V+LP D +P+ K D + LL +++ + G L+ +EP F GNYRLNFHGRVTVPS KN QLV P D +CQFGKV DRFHLD++ P+N FQAFC++LAQFN+
Sbjct: 93 IENVMYNNEEVKD-EIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 247
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A7S2D0G1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D0G1_9STRA) HSP 1 Score: 157 bits (397), Expect = 5.050e-39 Identity = 76/156 (48.72%), Postives = 107/156 (68.59%), Query Frame = 2
Query: 284 MSGVVYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYG-GMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFNH 748
+ V+Y ++E K E+GA+ FA+P +++++R+G+QPRK V+LP D +P+ K D + LL +++ + G L+ +EP F GNYRLNFHGRVTVPS KN QLV P D +CQFGKV DRFHLD++ P+N FQAFC++LAQFN+
Sbjct: 312 IENVMYNNEEVKD-EIGAVLFAKPTIMDHMRDGAQPRKLKVVLPPADENSLPIPQKNKFNDPYAGLLGQLQSDQLEEGCRQLERKEPVFENGNYRLNFHGRVTVPSVKNFQLVDPRDVADVICQFGKVDDDRFHLDFKGPLNPFQAFCVALAQFNY 466
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A7S2H5B0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H5B0_9STRA) HSP 1 Score: 150 bits (380), Expect = 6.220e-37 Identity = 73/156 (46.79%), Postives = 105/156 (67.31%), Query Frame = 2
Query: 284 MSGVVYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGVPVSHKVDPLDADSDLLSRIRQGRYG-GMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFNH 748
+ V+Y ++EKK E+G + F +P +++++R+G+QPRK +++P ++ + P+ V D LL++I+ G + +EP F GNYRLNF GRVTVPS KN QLVS DD + CQFGKV DRFHLD++ P+NAFQAFC+ LAQFN+
Sbjct: 274 IENVMYNNEEKKQ-EVGGVMFMKPSIMDHMRDGAQPRKLKLIVPPINEKNCPIPQPVKFNDPYGGLLAQIQVDEIEQGCSVFERKEPVFENGNYRLNFRGRVTVPSVKNFQLVSTDDVSDIKCQFGKVADDRFHLDFKHPMNAFQAFCVCLAQFNY 428
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A482S955_9ARCH (Tub domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S955_9ARCH) HSP 1 Score: 114 bits (285), Expect = 2.930e-25 Identity = 65/148 (43.92%), Postives = 90/148 (60.81%), Query Frame = 2
Query: 326 ELGAISFARPGLVNYLREGSQPRKFFVLLPALDI-----EGVPVSHKVDPLDADSDLLSRI---RQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
EL +SF + L+N L EG+QPRK +L+ D+ EGV S+ P + SDLL + ++ M L+T+EP GNYRLNF GRV +PS KN Q+V + +CQFGKV +D FHLD+++P NA +AF ++L QFN
Sbjct: 105 ELMGVSFEKMTLINQLTEGTQPRKMRILILRPDVVTGTTEGVYPSNFGSP--SLSDLLLDVVDRKKSLPENMMLLETKEPVLENGNYRLNFFGRVNLPSVKNFQIVHYSNIDEILCQFGKVEEDMFHLDFKTPFNALEAFALALCQFN 250
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Match: A0A1W0A956_9STRA (Tub domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A956_9STRA) HSP 1 Score: 109 bits (272), Expect = 1.170e-22 Identity = 63/152 (41.45%), Postives = 87/152 (57.24%), Query Frame = 2
Query: 296 VYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEG--VPVSHKVDPLDADSDLLSRIRQGRYGGMFPLKTREPTFMRGNYRLNFHGRVTVPSAKNIQLVSPDDETHTVCQFGKVGKDRFHLDYRSPVNAFQAFCISLAQFN 745
V S +++ ELGAI+F S+PRK V+ P L +G V KVD S L+ +++ G+ + L+ +EP + +G YRLNF+GRV+VPS KN QLV + + QFGKV FHLD+R P+ FQAF I+L QFN
Sbjct: 206 VMISSQEEKRELGAITFETKS------SHSKPRKLTVICPGLTKDGDAKSVPSKVDSF---SSLVEQLKLGQTSDLIVLENKEPEYEKGCYRLNFNGRVSVPSVKNFQLVLRGTKQGVILQFGKVSDKLFHLDFRHPLTPFQAFAIALCQFN 348 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18309.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig71.18309.1 >prot_F-serratus_M_contig71.18309.1 ID=prot_F-serratus_M_contig71.18309.1|Name=mRNA_F-serratus_M_contig71.18309.1|organism=Fucus serratus male|type=polypeptide|length=156bp MSGVVYASDEKKAAELGAISFARPGLVNYLREGSQPRKFFVLLPALDIEGback to top mRNA from alignment at F-serratus_M_contig71:811598..814052+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig71.18309.1 ID=mRNA_F-serratus_M_contig71.18309.1|Name=mRNA_F-serratus_M_contig71.18309.1|organism=Fucus serratus male|type=mRNA|length=2455bp|location=Sequence derived from alignment at F-serratus_M_contig71:811598..814052+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig71:811598..814052+ >mRNA_F-serratus_M_contig71.18309.1 ID=mRNA_F-serratus_M_contig71.18309.1|Name=mRNA_F-serratus_M_contig71.18309.1|organism=Fucus serratus male|type=CDS|length=936bp|location=Sequence derived from alignment at F-serratus_M_contig71:811598..814052+ (Fucus serratus male)back to top |