prot_F-serratus_M_contig71.18307.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig71.18307.1
Unique Nameprot_F-serratus_M_contig71.18307.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length203
Homology
BLAST of mRNA_F-serratus_M_contig71.18307.1 vs. uniprot
Match: D7G118_ECTSI (Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G118_ECTSI)

HSP 1 Score: 361 bits (927), Expect = 1.300e-125
Identity = 187/202 (92.57%), Postives = 189/202 (93.56%), Query Frame = 0
Query:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSAVQLGGASNTTSSSSKCC 202
            MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDK VD+AAAKE+AESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNS V LGG         KCC
Sbjct:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVNLGGXXXXXXXXXKCC 202          
BLAST of mRNA_F-serratus_M_contig71.18307.1 vs. uniprot
Match: A0A835Z965_9STRA (Rab1A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z965_9STRA)

HSP 1 Score: 339 bits (869), Expect = 1.030e-116
Identity = 180/206 (87.38%), Postives = 186/206 (90.29%), Query Frame = 0
Query:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSA----VQLGGASNTTSSSSKCC 202
            MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESF HVNDWLSEVNRYASEGTSKLLIGNKSDR DKAV T  AK FA+SLGIPFLETSAK+ASNVEEAFLTMASELIRTREARAA Q ++S     VQL   ++   SS KCC
Sbjct:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC 206          
BLAST of mRNA_F-serratus_M_contig71.18307.1 vs. uniprot
Match: W7TI50_9STRA (Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TI50_9STRA)

HSP 1 Score: 311 bits (798), Expect = 8.010e-106
Identity = 161/200 (80.50%), Postives = 173/200 (86.50%), Query Frame = 0
Query:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSAVQLGGASNTTSSSSK 200
            MSKRDYD LFKLVLIGD+GVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT++ESF+H+ DWL+EVNRYASEGT KLL+GNKSDR DK V T  AK+FA+ LGIPFLETSAKNASNVEEAFLTMA ELIR REA+ A          G + +T S SSK
Sbjct:    1 MSKRDYDFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDRPDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAAAPGPGGAASGKSGDTVSLSSK 200          
BLAST of mRNA_F-serratus_M_contig71.18307.1 vs. uniprot
Match: F0YFR6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFR6_AURAN)

HSP 1 Score: 311 bits (796), Expect = 1.270e-105
Identity = 162/205 (79.02%), Postives = 177/205 (86.34%), Query Frame = 0
Query:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDN---SAVQLGGASNTTSSSSKCC 202
            MSKRDYDHLFKLVLIGD+GVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTS ESFDHV+DWL+EVNRYA+EGT KLL+GNK D EDK V T AAKE+A+ LGIPFLETSAKNA+NVEEAFLTMA ELIR REA  + +      S ++L G S+ T    KCC
Sbjct:    1 MSKRDYDHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVSDWLTEVNRYANEGTCKLLVGNKCDMEDKVVTTEAAKEYADGLGIPFLETSAKNATNVEEAFLTMAGELIRLREASQSAKPGAGGASGLKLSGGSSRTK---KCC 202          
BLAST of mRNA_F-serratus_M_contig71.18307.1 vs. uniprot
Match: A0A7S3VAP6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAP6_9STRA)

HSP 1 Score: 310 bits (794), Expect = 3.140e-105
Identity = 163/203 (80.30%), Postives = 172/203 (84.73%), Query Frame = 0
Query:    3 KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDRE-DKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAAT--QVDNSAVQLGGASNTTSSSSKCC 202
            K DYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQ+SFDHVNDWL EVNRYASEGT KLL+GNKSDR  DK V    AKEFA+ +GIPFLETSAK+A+NVEEAFLTMASELI+ R AR  T    D   VQLGG        S CC
Sbjct:    8 KSDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQDSFDHVNDWLKEVNRYASEGTCKLLVGNKSDRTTDKVVTAEQAKEFADDIGIPFLETSAKSAANVEEAFLTMASELIKQRIARGGTAEDADGDNVQLGGGKRAKEMMSNCC 210          
BLAST of mRNA_F-serratus_M_contig71.18307.1 vs. uniprot
Match: A0A7S2Y0T5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T5_9STRA)

HSP 1 Score: 305 bits (780), Expect = 3.010e-103
Identity = 154/202 (76.24%), Postives = 179/202 (88.61%), Query Frame = 0
Query:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSAVQLGGASNTTSSSSKCC 202
            MSKRDYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D+KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYD+T +E+FDHVNDWL+EV+RYA E T KLL+GNKSDR D+AV+T  AKE+A+ LGIPF+ETSAK+A+NVE+AFLTMA +LI  R+A+   +  N  V LGG S++TS   +CC
Sbjct:    1 MSKRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKLDQKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDITHKEAFDHVNDWLAEVDRYAGESTCKLLVGNKSDRTDRAVETQTAKEYADELGIPFIETSAKSAANVEQAFLTMAKQLIELRQAKGVEE-SNQNVSLGGKSSSTSLP-QCC 200          
BLAST of mRNA_F-serratus_M_contig71.18307.1 vs. uniprot
Match: A0A7S3JUQ1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUQ1_9STRA)

HSP 1 Score: 301 bits (771), Expect = 9.010e-102
Identity = 158/208 (75.96%), Postives = 179/208 (86.06%), Query Frame = 0
Query:    2 SKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARA------ATQVDNSAVQLGGASNTTSSSSKCC 202
            +KRDYDHLFKLVLIGD+GVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK++ KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHV +WL+EVNRYA+EGT KLL+GNKSD   +K V T  AKE+A+SLGIPFLETSAKNA+NVEEAFLTMA+ELI+ RE+++       T    S ++L G   T SS+ KCC
Sbjct:    3 TKRDYDHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVEGKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVAEWLAEVNRYANEGTCKLLVGNKSDMGTEKCVSTETAKEYADSLGIPFLETSAKNATNVEEAFLTMAAELIKLRESKSNASGKGGTSTTASGLKLSG---TRSSNKKCC 207          
BLAST of mRNA_F-serratus_M_contig71.18307.1 vs. uniprot
Match: A0A7S1GR15_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GR15_CYCTE)

HSP 1 Score: 301 bits (771), Expect = 1.030e-101
Identity = 156/189 (82.54%), Postives = 165/189 (87.30%), Query Frame = 0
Query:    3 KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSAVQLGG 190
            +RDYD+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTS ESFDHVNDWL EVNRYA+EGT KLL+GNKSDR  DK V    AKEFA+ LGI FLETSAK+A NVEEAFLTMA ELIR R+AR  T    S + L G
Sbjct:   12 QRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRVADKVVTEEKAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIRQRDARGITSDGKSGIDLSG 200          
BLAST of mRNA_F-serratus_M_contig71.18307.1 vs. uniprot
Match: A0A7S2C3M2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C3M2_9STRA)

HSP 1 Score: 299 bits (765), Expect = 7.380e-101
Identity = 149/175 (85.14%), Postives = 163/175 (93.14%), Query Frame = 0
Query:    2 SKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAAAKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREAR 176
            +KRDYDHLFKLVLIGDSGVGKSCLLLRFAD+AFT+SYISTIGVDFRFRT+K++K TVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESF+HV+DWL+EVNRYASEGT KLL+GNKSDR D AV +  AK +AE LGIPFLETSAKNA NVE AFLTMASELI+ R+AR
Sbjct:    8 TKRDYDHLFKLVLIGDSGVGKSCLLLRFADNAFTESYISTIGVDFRFRTIKVEKNTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFNHVSDWLTEVNRYASEGTCKLLVGNKSDRADWAVSSEEAKVYAEKLGIPFLETSAKNAENVETAFLTMASELIKIRQAR 182          
BLAST of mRNA_F-serratus_M_contig71.18307.1 vs. uniprot
Match: A0A6V1NVS4_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NVS4_HETAK)

HSP 1 Score: 300 bits (767), Expect = 8.350e-101
Identity = 157/207 (75.85%), Postives = 178/207 (85.99%), Query Frame = 0
Query:    1 MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAA-----AKEFAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSAVQLGGASNTTSSSSKCC 202
            M+KRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRF+TVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDV ++ESF+HV+ WLSEVNRYA+EGT KLL+GNKSDR ++A D        AK++A+ LGIPF+ETSAK+ASNVEEAFLTMAS+LI+ REAR   +    AV LG  S  +S+  KCC
Sbjct:   26 MAKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFKTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVMNKESFEHVSAWLSEVNRYANEGTCKLLVGNKSDRAEEAPDARQVAAEEAKKYADDLGIPFIETSAKSASNVEEAFLTMASQLIQLREARGEDESMKPAVTLG--SRQSSAKDKCC 230          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig71.18307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G118_ECTSI1.300e-12592.57Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835Z965_9STRA1.030e-11687.38Rab1A, rab family GTPase n=1 Tax=Tribonema minus T... [more]
W7TI50_9STRA8.010e-10680.50Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=... [more]
F0YFR6_AURAN1.270e-10579.02Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3VAP6_9STRA3.140e-10580.30Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2Y0T5_9STRA3.010e-10376.24Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3JUQ1_9STRA9.010e-10275.96Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S1GR15_CYCTE1.030e-10182.54Hypothetical protein n=2 Tax=Cyclophora tenuis Tax... [more]
A0A7S2C3M2_9STRA7.380e-10185.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V1NVS4_HETAK8.350e-10175.85Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 33..49
score: 38.7
coord: 51..73
score: 56.57
coord: 10..31
score: 58.6
coord: 113..126
score: 40.09
coord: 147..169
score: 44.71
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 15..201
e-value: 1.6E-5
score: 29.1
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 10..172
e-value: 6.1E-98
score: 341.4
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 12..173
e-value: 4.1E-15
score: 66.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 7..172
e-value: 7.0E-33
score: 125.2
NoneNo IPR availableGENE3D3.40.50.300coord: 3..202
e-value: 7.2E-70
score: 236.4
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 3..194
NoneNo IPR availablePANTHERPTHR24073:SF1110ZGC:171927coord: 3..194
NoneNo IPR availablePROSITEPS51419RABcoord: 5..202
score: 37.378
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 10..164
e-value: 1.8E-35
score: 120.1
IPR001806Small GTPasePFAMPF00071Rascoord: 11..169
e-value: 1.4E-62
score: 210.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig71contigF-serratus_M_contig71:784515..799846 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig71.18307.1mRNA_F-serratus_M_contig71.18307.1Fucus serratus malemRNAF-serratus_M_contig71 784436..800004 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig71.18307.1 ID=prot_F-serratus_M_contig71.18307.1|Name=mRNA_F-serratus_M_contig71.18307.1|organism=Fucus serratus male|type=polypeptide|length=203bp
MSKRDYDHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRT
VKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFDHV
NDWLSEVNRYASEGTSKLLIGNKSDREDKAVDTAAAKEFAESLGIPFLET
SAKNASNVEEAFLTMASELIRTREARAATQVDNSAVQLGGASNTTSSSSK
CC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
IPR027417P-loop_NTPase